RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 PLEKHD1A6NEE1 506 aa22.13■■□□□ 1.13
CHTOP-201ENST00000368686 HMGN5P82970 282 aaKnown RBP22.13■■□□□ 1.13
CHTOP-201ENST00000368686 TTC37Q6PGP7 1564 aa22.13■■□□□ 1.13
CHTOP-201ENST00000368686 HNRNPMP52272 730 aaKnown RBP eCLIP22.12■■□□□ 1.139e-8■■■■■ 28.7
CHTOP-201ENST00000368686 LRSAM1Q6UWE0 723 aa22.12■■□□□ 1.13
CHTOP-201ENST00000368686 AK9Q5TCS8 1911 aa22.12■■□□□ 1.13
CHTOP-201ENST00000368686 CYP2E1P05181 493 aaPredicted RBP22.11■■□□□ 1.13
CHTOP-201ENST00000368686 GTF2F1P35269 517 aaKnown RBP eCLIP22.11■■□□□ 1.13
CHTOP-201ENST00000368686 BBXQ8WY36 941 aaPredicted RBP22.11■■□□□ 1.13
CHTOP-201ENST00000368686 RSPH4AQ5TD94 716 aa22.11■■□□□ 1.13
CHTOP-201ENST00000368686 ITPRIPQ8IWB1 547 aa22.11■■□□□ 1.13
CHTOP-201ENST00000368686 DUOX2Q9NRD8 1548 aa22.11■■□□□ 1.13
CHTOP-201ENST00000368686 IFT140Q96RY7 1462 aa22.1■■□□□ 1.13
CHTOP-201ENST00000368686 TRIM27P14373 513 aa22.09■■□□□ 1.13
CHTOP-201ENST00000368686 CHD1LQ86WJ1 897 aa22.09■■□□□ 1.13
CHTOP-201ENST00000368686 SPHKAPQ2M3C7 1700 aa22.08■■□□□ 1.13
CHTOP-201ENST00000368686 RBM42Q9BTD8 480 aaKnown RBP22.08■■□□□ 1.13
CHTOP-201ENST00000368686 LNPKQ9C0E8 428 aa22.08■■□□□ 1.13
CHTOP-201ENST00000368686 ABCA8O94911 1581 aa22.08■■□□□ 1.12
CHTOP-201ENST00000368686 ZNF710Q8N1W2 664 aa22.08■■□□□ 1.12
CHTOP-201ENST00000368686 CARMIL2Q6F5E8 1435 aa22.07■■□□□ 1.12
CHTOP-201ENST00000368686 MRC2Q9UBG0 1479 aa22.07■■□□□ 1.12
CHTOP-201ENST00000368686 GTF2E1P29083 439 aaPredicted RBP22.07■■□□□ 1.12
CHTOP-201ENST00000368686 SMC4Q9NTJ3 1288 aa22.07■■□□□ 1.12
CHTOP-201ENST00000368686 CBX1P83916 185 aa22.06■■□□□ 1.12
CHTOP-201ENST00000368686 DNTTIP2Q5QJE6 756 aaKnown RBP22.06■■□□□ 1.12
CHTOP-201ENST00000368686 TAF3Q5VWG9 929 aa22.06■■□□□ 1.12
CHTOP-201ENST00000368686 ATF7IPQ6VMQ6 1270 aa22.06■■□□□ 1.12
CHTOP-201ENST00000368686 ZBTB40Q9NUA8 1239 aa22.06■■□□□ 1.12
CHTOP-201ENST00000368686 STAC3Q96MF2 364 aa22.06■■□□□ 1.12
CHTOP-201ENST00000368686 REREQ9P2R6 1566 aa22.06■■□□□ 1.12
CHTOP-201ENST00000368686 MAST1Q9Y2H9 1570 aa22.06■■□□□ 1.12
CHTOP-201ENST00000368686 PTMAP06454 111 aaKnown RBP22.05■■□□□ 1.12
CHTOP-201ENST00000368686 RABEP1Q15276 862 aa22.05■■□□□ 1.12
CHTOP-201ENST00000368686 TBC1D9Q6ZT07 1266 aa22.05■■□□□ 1.12
CHTOP-201ENST00000368686 GPT2Q8TD30 523 aa22.05■■□□□ 1.12
CHTOP-201ENST00000368686 CARD14Q9BXL6 1004 aa22.05■■□□□ 1.12
CHTOP-201ENST00000368686 CWC22Q9HCG8 908 aaKnown RBP22.05■■□□□ 1.12
CHTOP-201ENST00000368686 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.04■■□□□ 1.124e-10■□□□□ 9.2
CHTOP-201ENST00000368686 SAMD9LQ8IVG5 1584 aa22.04■■□□□ 1.12
CHTOP-201ENST00000368686 RBM27Q9P2N5 1060 aaKnown RBP22.04■■□□□ 1.12
CHTOP-201ENST00000368686 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.04■■□□□ 1.12
CHTOP-201ENST00000368686 PRPF40AO75400 957 aaKnown RBP22.03■■□□□ 1.12
CHTOP-201ENST00000368686 ADGRL1O94910 1474 aa22.02■■□□□ 1.12
CHTOP-201ENST00000368686 ERVK-7P63135 1459 aa22.02■■□□□ 1.12
CHTOP-201ENST00000368686 SYCE3A1L190 88 aa22.01■■□□□ 1.11
CHTOP-201ENST00000368686 TMEM63CQ9P1W3 806 aa22.01■■□□□ 1.11
CHTOP-201ENST00000368686 ATP10BO94823 1461 aa22.01■■□□□ 1.11
CHTOP-201ENST00000368686 KIAA1210Q9ULL0 1709 aa22.01■■□□□ 1.11
CHTOP-201ENST00000368686 PIBF1Q8WXW3 757 aa22.01■■□□□ 1.11
CHTOP-201ENST00000368686 KIF3AQ9Y496 699 aa22.01■■□□□ 1.11
CHTOP-201ENST00000368686 MBD3O95983 291 aa22■■□□□ 1.11
CHTOP-201ENST00000368686 ATP2B3Q16720 1220 aa22■■□□□ 1.11
CHTOP-201ENST00000368686 TMEM57Q8N5G2 664 aa22■■□□□ 1.11
CHTOP-201ENST00000368686 ADGRB2O60241 1585 aa21.99■■□□□ 1.11
CHTOP-201ENST00000368686 CFAP44Q96MT7 982 aa21.99■■□□□ 1.11
CHTOP-201ENST00000368686 CLTCL1P53675 1640 aa21.98■■□□□ 1.11
CHTOP-201ENST00000368686 CDC45O75419 566 aa21.98■■□□□ 1.11
CHTOP-201ENST00000368686 SSH1Q8WYL5 1049 aa21.98■■□□□ 1.11
CHTOP-201ENST00000368686 GCC1Q96CN9 775 aa21.98■■□□□ 1.11
CHTOP-201ENST00000368686 MORC1Q86VD1 984 aa21.97■■□□□ 1.11
CHTOP-201ENST00000368686 ZNF518AQ6AHZ1 1483 aa21.97■■□□□ 1.11
CHTOP-201ENST00000368686 PREX2Q70Z35 1606 aa21.97■■□□□ 1.11
CHTOP-201ENST00000368686 NOS1P29475 1434 aa21.97■■□□□ 1.11
CHTOP-201ENST00000368686 NOLC1Q14978 699 aaKnown RBP eCLIP21.96■■□□□ 1.11
CHTOP-201ENST00000368686 NOB1Q9ULX3 412 aaKnown RBP21.96■■□□□ 1.11
CHTOP-201ENST00000368686 ABCC11Q96J66 1382 aa21.96■■□□□ 1.11
CHTOP-201ENST00000368686 IPO8O15397 1037 aaKnown RBP21.96■■□□□ 1.11
CHTOP-201ENST00000368686 PKP1Q13835 747 aa21.96■■□□□ 1.11
CHTOP-201ENST00000368686 TSPY26PQ9H489 355 aa21.96■■□□□ 1.11
CHTOP-201ENST00000368686 CDC42BPBQ9Y5S2 1711 aa21.95■■□□□ 1.11
CHTOP-201ENST00000368686 EXOSC9Q06265 439 aaKnown RBP21.95■■□□□ 1.1
CHTOP-201ENST00000368686 JARID2Q92833 1246 aaPredicted RBP21.95■■□□□ 1.1
CHTOP-201ENST00000368686 CFAP53Q96M91 514 aa21.95■■□□□ 1.1
CHTOP-201ENST00000368686 RNF214Q8ND24 703 aa21.95■■□□□ 1.1
CHTOP-201ENST00000368686 TSC1Q92574 1164 aa21.95■■□□□ 1.1
CHTOP-201ENST00000368686 ANKRD45Q5TZF3 282 aa21.94■■□□□ 1.1
CHTOP-201ENST00000368686 PDCL2Q8N4E4 241 aa21.94■■□□□ 1.1
CHTOP-201ENST00000368686 TSR2Q969E8 191 aaKnown RBP21.94■■□□□ 1.1
CHTOP-201ENST00000368686 BCL2L12Q9HB09 334 aa21.93■■□□□ 1.1
CHTOP-201ENST00000368686 TMEM51Q9NW97 253 aa21.93■■□□□ 1.1
CHTOP-201ENST00000368686 FKBP5Q13451 457 aaPredicted RBP21.92■■□□□ 1.1
CHTOP-201ENST00000368686 SPTLC3Q9NUV7 552 aa21.92■■□□□ 1.1
CHTOP-201ENST00000368686 SYAP1Q96A49 352 aaPredicted RBP21.92■■□□□ 1.1
CHTOP-201ENST00000368686 YEATS2Q9ULM3 1422 aa21.91■■□□□ 1.1
CHTOP-201ENST00000368686 NAP1L2Q9ULW6 460 aaPredicted RBP21.91■■□□□ 1.1
CHTOP-201ENST00000368686 NSD3Q9BZ95 1437 aa21.91■■□□□ 1.1
CHTOP-201ENST00000368686 ZDHHC9Q9Y397 364 aa21.91■■□□□ 1.1
CHTOP-201ENST00000368686 UVSSAQ2YD98 709 aa21.9■■□□□ 1.1
CHTOP-201ENST00000368686 CHMP4BQ9H444 224 aaKnown RBP21.9■■□□□ 1.1
CHTOP-201ENST00000368686 MED14O60244 1454 aa21.9■■□□□ 1.1
CHTOP-201ENST00000368686 TRPM2O94759 1503 aa21.9■■□□□ 1.1
CHTOP-201ENST00000368686 SYCP2Q9BX26 1530 aa21.9■■□□□ 1.1
CHTOP-201ENST00000368686 PPRC1Q5VV67 1664 aaKnown RBP21.9■■□□□ 1.1
CHTOP-201ENST00000368686 ST18O60284 1047 aa21.9■■□□□ 1.1
CHTOP-201ENST00000368686 FAM184AQ8NB25 1140 aa21.9■■□□□ 1.1
CHTOP-201ENST00000368686 FEZ1Q99689 392 aa21.89■■□□□ 1.09
CHTOP-201ENST00000368686 NSFL1CQ9UNZ2 370 aaKnown RBP21.89■■□□□ 1.09
CHTOP-201ENST00000368686 USP32Q8NFA0 1604 aa21.89■■□□□ 1.09
CHTOP-201ENST00000368686 PPIP5K1Q6PFW1 1433 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms