RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 ARHGEF5Q12774 1597 aa10.47□□□□□ -0.73
PTPRK-206ENST00000368215 ZNF692Q9BU19 519 aaPredicted RBP10.47□□□□□ -0.73
PTPRK-206ENST00000368215 KDM5CP41229 1560 aa10.47□□□□□ -0.73
PTPRK-206ENST00000368215 FOXD4L6Q3SYB3 417 aaPredicted RBP10.47□□□□□ -0.73
PTPRK-206ENST00000368215 FOXD4L3Q6VB84 417 aaPredicted RBP10.47□□□□□ -0.73
PTPRK-206ENST00000368215 SLC4A2P04920 1241 aa10.46□□□□□ -0.73
PTPRK-206ENST00000368215 RNF123Q5XPI4 1314 aa10.46□□□□□ -0.73
PTPRK-206ENST00000368215 CHMP5Q9NZZ3 219 aa10.46□□□□□ -0.73
PTPRK-206ENST00000368215 ST18O60284 1047 aa10.46□□□□□ -0.74
PTPRK-206ENST00000368215 MCM10Q7L590 875 aa10.46□□□□□ -0.74
PTPRK-206ENST00000368215 PCDHB15Q9Y5E8 787 aa10.46□□□□□ -0.74
PTPRK-206ENST00000368215 TTC37Q6PGP7 1564 aa10.46□□□□□ -0.74
PTPRK-206ENST00000368215 WASLO00401 505 aaPredicted RBP10.46□□□□□ -0.74
PTPRK-206ENST00000368215 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.46□□□□□ -0.74
PTPRK-206ENST00000368215 C1orf141Q5JVX7 400 aa10.45□□□□□ -0.74
PTPRK-206ENST00000368215 CHMP3Q9Y3E7 222 aa10.45□□□□□ -0.74
PTPRK-206ENST00000368215 PLA2R1Q13018 1463 aa10.45□□□□□ -0.74
PTPRK-206ENST00000368215 RLBP1P12271 317 aa10.45□□□□□ -0.74
PTPRK-206ENST00000368215 ZRANB1Q9UGI0 708 aa10.45□□□□□ -0.74
PTPRK-206ENST00000368215 ATP7AQ04656 1500 aa10.45□□□□□ -0.74
PTPRK-206ENST00000368215 FAM83GA6ND36 823 aa10.45□□□□□ -0.74
PTPRK-206ENST00000368215 PIK3C2GO75747 1445 aa10.44□□□□□ -0.74
PTPRK-206ENST00000368215 ANKRD36BQ8N2N9 1353 aa10.44□□□□□ -0.74
PTPRK-206ENST00000368215 ERCC6L2Q5T890 1561 aa10.44□□□□□ -0.74
PTPRK-206ENST00000368215 CHD1LQ86WJ1 897 aa10.44□□□□□ -0.74
PTPRK-206ENST00000368215 CCDC9Q9Y3X0 531 aaKnown RBP10.44□□□□□ -0.74
PTPRK-206ENST00000368215 POLR3AO14802 1390 aaPredicted RBP10.44□□□□□ -0.74
PTPRK-206ENST00000368215 ZNF428Q96B54 188 aa10.43□□□□□ -0.74
PTPRK-206ENST00000368215 RBM33Q96EV2 1170 aaKnown RBP10.43□□□□□ -0.74
PTPRK-206ENST00000368215 MAGI2Q86UL8 1455 aa10.43□□□□□ -0.74
PTPRK-206ENST00000368215 DDX11L8A8MPP1 907 aa10.43□□□□□ -0.74
PTPRK-206ENST00000368215 CDC45O75419 566 aa10.43□□□□□ -0.74
PTPRK-206ENST00000368215 ANO2Q9NQ90 1003 aa10.43□□□□□ -0.74
PTPRK-206ENST00000368215 DDX49Q9Y6V7 483 aaKnown RBP10.43□□□□□ -0.74
PTPRK-206ENST00000368215 ESCO1Q5FWF5 840 aa10.43□□□□□ -0.74
PTPRK-206ENST00000368215 CHMP4AQ9BY43 222 aa10.42□□□□□ -0.74
PTPRK-206ENST00000368215 C9orf78Q9NZ63 289 aaPredicted RBP10.42□□□□□ -0.74
PTPRK-206ENST00000368215 CDC42BPAQ5VT25 1732 aa10.42□□□□□ -0.74
PTPRK-206ENST00000368215 NCKAP5LQ9HCH0 1330 aa10.42□□□□□ -0.74
PTPRK-206ENST00000368215 GCC1Q96CN9 775 aa10.42□□□□□ -0.74
PTPRK-206ENST00000368215 REC8O95072 547 aa10.42□□□□□ -0.74
PTPRK-206ENST00000368215 GAS2L2Q8NHY3 880 aa10.42□□□□□ -0.74
PTPRK-206ENST00000368215 BRPF3Q9ULD4 1205 aa10.42□□□□□ -0.74
PTPRK-206ENST00000368215 ATP10AO60312 1499 aa10.42□□□□□ -0.74
PTPRK-206ENST00000368215 INTS3Q68E01 1043 aaKnown RBP10.42□□□□□ -0.74
PTPRK-206ENST00000368215 NSD2O96028 1365 aa10.41□□□□□ -0.74
PTPRK-206ENST00000368215 DNTTIP2Q5QJE6 756 aaKnown RBP10.41□□□□□ -0.74
PTPRK-206ENST00000368215 THEMISQ8N1K5 641 aaPredicted RBP10.41□□□□□ -0.74
PTPRK-206ENST00000368215 BCORL1Q5H9F3 1711 aa10.41□□□□□ -0.74
PTPRK-206ENST00000368215 A0A1W2PP64 1363 aa10.41□□□□□ -0.74
PTPRK-206ENST00000368215 AIMP1Q12904 312 aaKnown RBP10.41□□□□□ -0.74
PTPRK-206ENST00000368215 IL27Q8NEV9 243 aa10.41□□□□□ -0.74
PTPRK-206ENST00000368215 UGGT1Q9NYU2 1555 aa10.41□□□□□ -0.74
PTPRK-206ENST00000368215 XPCQ01831 940 aaPredicted RBP10.4□□□□□ -0.74
PTPRK-206ENST00000368215 MYO5CQ9NQX4 1742 aa10.4□□□□□ -0.74
PTPRK-206ENST00000368215 GOLGA6L4A6NEF3 574 aa10.4□□□□□ -0.74
PTPRK-206ENST00000368215 C8orf34Q49A92 452 aa10.4□□□□□ -0.74
PTPRK-206ENST00000368215 UBTFL1P0CB47 393 aaPredicted RBP10.4□□□□□ -0.74
PTPRK-206ENST00000368215 GPATCH3Q96I76 525 aa10.4□□□□□ -0.74
PTPRK-206ENST00000368215 ABCC11Q96J66 1382 aa10.4□□□□□ -0.74
PTPRK-206ENST00000368215 POLKQ9UBT6 870 aa10.4□□□□□ -0.75
PTPRK-206ENST00000368215 PREX2Q70Z35 1606 aa10.39□□□□□ -0.75
PTPRK-206ENST00000368215 CCDC30Q5VVM6 783 aa10.39□□□□□ -0.75
PTPRK-206ENST00000368215 MBIPQ9NS73 344 aa10.39□□□□□ -0.75
PTPRK-206ENST00000368215 IFT57Q9NWB7 429 aa10.39□□□□□ -0.75
PTPRK-206ENST00000368215 BLMP54132 1417 aaPredicted RBP10.39□□□□□ -0.75
PTPRK-206ENST00000368215 AMOTL2Q9Y2J4 779 aa10.39□□□□□ -0.75
PTPRK-206ENST00000368215 PTMSP20962 102 aa10.39□□□□□ -0.75
PTPRK-206ENST00000368215 ALDH1L2Q3SY69 923 aa10.39□□□□□ -0.75
PTPRK-206ENST00000368215 HDGFL1Q5TGJ6 251 aa10.39□□□□□ -0.75
PTPRK-206ENST00000368215 SURF6O75683 361 aaKnown RBP10.38□□□□□ -0.75
PTPRK-206ENST00000368215 PHACTR3Q96KR7 559 aa10.38□□□□□ -0.75
PTPRK-206ENST00000368215 NLRP2Q9NX02 1062 aa10.38□□□□□ -0.75
PTPRK-206ENST00000368215 F6X3S4 739 aa10.38□□□□□ -0.75
PTPRK-206ENST00000368215 USHBP1Q8N6Y0 703 aa10.38□□□□□ -0.75
PTPRK-206ENST00000368215 ZMYM4Q5VZL5 1548 aa10.38□□□□□ -0.75
PTPRK-206ENST00000368215 NPC1L1Q9UHC9 1359 aa10.38□□□□□ -0.75
PTPRK-206ENST00000368215 CHD1O14646 1710 aa10.38□□□□□ -0.75
PTPRK-206ENST00000368215 SMARCA5O60264 1052 aaPredicted RBP10.38□□□□□ -0.75
PTPRK-206ENST00000368215 MSNP26038 577 aaKnown RBP10.38□□□□□ -0.75
PTPRK-206ENST00000368215 AEBP1Q8IUX7 1158 aa10.38□□□□□ -0.75
PTPRK-206ENST00000368215 KDM5DQ9BY66 1539 aa10.38□□□□□ -0.75
PTPRK-206ENST00000368215 NPATQ14207 1427 aa10.38□□□□□ -0.75
PTPRK-206ENST00000368215 HDAC5Q9UQL6 1122 aa10.37□□□□□ -0.75
PTPRK-206ENST00000368215 PTPRTO14522 1441 aa10.37□□□□□ -0.75
PTPRK-206ENST00000368215 HSP90AB2PQ58FF8 381 aa10.37□□□□□ -0.75
PTPRK-206ENST00000368215 DIAPH3Q9NSV4 1193 aa10.37□□□□□ -0.75
PTPRK-206ENST00000368215 GNAI2P04899 355 aa10.37□□□□□ -0.75
PTPRK-206ENST00000368215 CCDC27Q2M243 656 aa10.37□□□□□ -0.75
PTPRK-206ENST00000368215 ACEP12821 1306 aa10.37□□□□□ -0.75
PTPRK-206ENST00000368215 TRAK2O60296 914 aa10.37□□□□□ -0.75
PTPRK-206ENST00000368215 SEC24BO95487 1268 aa10.37□□□□□ -0.75
PTPRK-206ENST00000368215 GNAI3P08754 354 aa10.37□□□□□ -0.75
PTPRK-206ENST00000368215 TSPYL6Q8N831 410 aa10.37□□□□□ -0.75
PTPRK-206ENST00000368215 TBC1D2Q9BYX2 928 aa10.36□□□□□ -0.75
PTPRK-206ENST00000368215 EXOC6BQ9Y2D4 811 aa10.36□□□□□ -0.75
PTPRK-206ENST00000368215 ZRSR1Q15695 479 aaKnown RBP10.36□□□□□ -0.75
PTPRK-206ENST00000368215 MCTP1Q6DN14 999 aa10.36□□□□□ -0.75
PTPRK-206ENST00000368215 IFIT2P09913 472 aaKnown RBP10.36□□□□□ -0.75
PTPRK-206ENST00000368215 RAPGEF4Q8WZA2 1011 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms