RNA–Protein interactions for RNA: ENST00000368209.9

HDGF-203, Transcript of heparin binding growth factor, humanhuman

TSL 2 BASIC

Gene HDGF, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-203ENST00000368209 NUDCQ9Y266 331 aa17.77■□□□□ 0.44
HDGF-203ENST00000368209 PNPLA6Q8IY17 1366 aa17.77■□□□□ 0.44
HDGF-203ENST00000368209 ZRANB1Q9UGI0 708 aa17.77■□□□□ 0.43
HDGF-203ENST00000368209 SUPT16HQ9Y5B9 1047 aaKnown RBP17.76■□□□□ 0.43
HDGF-203ENST00000368209 ADGRL3Q9HAR2 1447 aa17.76■□□□□ 0.43
HDGF-203ENST00000368209 ZNF521Q96K83 1311 aa17.75■□□□□ 0.43
HDGF-203ENST00000368209 SALL2Q9Y467 1007 aaPredicted RBP17.75■□□□□ 0.43
HDGF-203ENST00000368209 TTC21BQ7Z4L5 1316 aa17.75■□□□□ 0.43
HDGF-203ENST00000368209 MAP2P11137 1827 aaKnown RBP17.74■□□□□ 0.43
HDGF-203ENST00000368209 CCDC146Q8IYE0 955 aa17.74■□□□□ 0.43
HDGF-203ENST00000368209 RBM33Q96EV2 1170 aaKnown RBP17.74■□□□□ 0.43
HDGF-203ENST00000368209 LMTK3Q96Q04 1460 aa17.74■□□□□ 0.43
HDGF-203ENST00000368209 OVOS2A0A0J9YW53 1432 aa17.73■□□□□ 0.43
HDGF-203ENST00000368209 OVOS2Q6IE36 1432 aa17.73■□□□□ 0.43
HDGF-203ENST00000368209 FBLN1P23142 703 aa17.73■□□□□ 0.43
HDGF-203ENST00000368209 PDE3BQ13370 1112 aa17.73■□□□□ 0.43
HDGF-203ENST00000368209 CFAP53Q96M91 514 aa17.73■□□□□ 0.43
HDGF-203ENST00000368209 POLKQ9UBT6 870 aa17.73■□□□□ 0.43
HDGF-203ENST00000368209 AATKQ6ZMQ8 1374 aa17.73■□□□□ 0.43
HDGF-203ENST00000368209 IQSEC2Q5JU85 1478 aa17.73■□□□□ 0.43
HDGF-203ENST00000368209 STRCP1A6NGW2 1772 aa17.72■□□□□ 0.43
HDGF-203ENST00000368209 PMFBP1Q8TBY8 1022 aa17.72■□□□□ 0.43
HDGF-203ENST00000368209 CDCA7LQ96GN5 454 aa17.72■□□□□ 0.43
HDGF-203ENST00000368209 APAF1O14727 1248 aa17.7■□□□□ 0.42
HDGF-203ENST00000368209 HSPA2P54652 639 aa17.7■□□□□ 0.42
HDGF-203ENST00000368209 FKBP8Q14318 412 aa17.69■□□□□ 0.42
HDGF-203ENST00000368209 COG3Q96JB2 828 aa17.69■□□□□ 0.42
HDGF-203ENST00000368209 RNF123Q5XPI4 1314 aa17.68■□□□□ 0.42
HDGF-203ENST00000368209 PIK3C2AO00443 1686 aa17.68■□□□□ 0.42
HDGF-203ENST00000368209 STRCQ7RTU9 1775 aa17.68■□□□□ 0.42
HDGF-203ENST00000368209 CDK12Q9NYV4 1490 aaPredicted RBP17.68■□□□□ 0.42
HDGF-203ENST00000368209 USP31Q70CQ4 1352 aa17.67■□□□□ 0.42
HDGF-203ENST00000368209 MARF1Q9Y4F3 1742 aaKnown RBP17.67■□□□□ 0.42
HDGF-203ENST00000368209 EMILIN1Q9Y6C2 1016 aa17.67■□□□□ 0.42
HDGF-203ENST00000368209 TTC21AQ8NDW8 1320 aa17.67■□□□□ 0.42
HDGF-203ENST00000368209 USP54Q70EL1 1684 aa17.66■□□□□ 0.42
HDGF-203ENST00000368209 NGDNQ8NEJ9 315 aaKnown RBP17.66■□□□□ 0.42
HDGF-203ENST00000368209 RUNDC1Q96C34 613 aa17.66■□□□□ 0.42
HDGF-203ENST00000368209 PHF23Q9BUL5 403 aaPredicted RBP17.64■□□□□ 0.42
HDGF-203ENST00000368209 U2AF1L5P0DN76 240 aaPredicted RBP17.64■□□□□ 0.41
HDGF-203ENST00000368209 U2AF1Q01081 240 aaKnown RBP eCLIP17.64■□□□□ 0.41
HDGF-203ENST00000368209 PLEKHF1Q96S99 279 aa17.64■□□□□ 0.41
HDGF-203ENST00000368209 DIAPH1O60610 1272 aaKnown RBP17.63■□□□□ 0.41
HDGF-203ENST00000368209 NGEFQ8N5V2 710 aa17.63■□□□□ 0.41
HDGF-203ENST00000368209 PEAK1Q9H792 1746 aa17.63■□□□□ 0.41
HDGF-203ENST00000368209 NEFLP07196 543 aa17.63■□□□□ 0.41
HDGF-203ENST00000368209 RRS1Q15050 365 aaKnown RBP17.63■□□□□ 0.41
HDGF-203ENST00000368209 PROSER2Q86WR7 435 aaPredicted RBP17.62■□□□□ 0.41
HDGF-203ENST00000368209 TRMT2AQ8IZ69 625 aaKnown RBP17.62■□□□□ 0.41
HDGF-203ENST00000368209 PHF8Q9UPP1 1060 aa17.62■□□□□ 0.41
HDGF-203ENST00000368209 DUSP27Q5VZP5 1158 aa17.62■□□□□ 0.41
HDGF-203ENST00000368209 TCP11L2Q8N4U5 519 aa17.62■□□□□ 0.41
HDGF-203ENST00000368209 DMRT2Q9Y5R5 561 aa17.62■□□□□ 0.41
HDGF-203ENST00000368209 SPINK5Q9NQ38 1064 aaPredicted RBP17.61■□□□□ 0.41
HDGF-203ENST00000368209 LRRC7Q96NW7 1537 aa17.6■□□□□ 0.41
HDGF-203ENST00000368209 IL13P35225 146 aa17.6■□□□□ 0.41
HDGF-203ENST00000368209 GOLGA2Q08379 1002 aa17.6■□□□□ 0.41
HDGF-203ENST00000368209 U2SURPO15042 1029 aaKnown RBP17.6■□□□□ 0.41
HDGF-203ENST00000368209 PPM1GO15355 546 aaPredicted RBP17.6■□□□□ 0.41
HDGF-203ENST00000368209 IRX6P78412 446 aaPredicted RBP17.6■□□□□ 0.41
HDGF-203ENST00000368209 SLFN5Q08AF3 891 aa17.6■□□□□ 0.41
HDGF-203ENST00000368209 WWC1Q8IX03 1113 aa17.6■□□□□ 0.41
HDGF-203ENST00000368209 NCBP3Q53F19 620 aaKnown RBP17.59■□□□□ 0.41
HDGF-203ENST00000368209 TMEM94Q12767 1356 aa17.59■□□□□ 0.41
HDGF-203ENST00000368209 NCOA3Q9Y6Q9 1424 aa17.59■□□□□ 0.41
HDGF-203ENST00000368209 XIRP1Q702N8 1843 aaKnown RBP17.58■□□□□ 0.4
HDGF-203ENST00000368209 CCDC27Q2M243 656 aa17.57■□□□□ 0.4
HDGF-203ENST00000368209 C14orf37Q86TY3 774 aa17.57■□□□□ 0.4
HDGF-203ENST00000368209 C19orf44Q9H6X5 657 aa17.57■□□□□ 0.4
HDGF-203ENST00000368209 RRP7AQ9Y3A4 280 aaKnown RBP17.57■□□□□ 0.4
HDGF-203ENST00000368209 C1orf167Q5SNV9 1468 aa17.57■□□□□ 0.4
HDGF-203ENST00000368209 ORAI2Q96SN7 254 aa17.57■□□□□ 0.4
HDGF-203ENST00000368209 RSPH6AQ9H0K4 717 aa17.57■□□□□ 0.4
HDGF-203ENST00000368209 DCCP43146 1447 aa17.57■□□□□ 0.4
HDGF-203ENST00000368209 ESCO1Q5FWF5 840 aa17.56■□□□□ 0.4
HDGF-203ENST00000368209 RCAN3Q9UKA8 241 aa17.56■□□□□ 0.4
HDGF-203ENST00000368209 RGPD1P0DJD0 1748 aa17.55■□□□□ 0.4
HDGF-203ENST00000368209 FCHSD2O94868 740 aa17.55■□□□□ 0.4
HDGF-203ENST00000368209 MST1RQ04912 1400 aa17.55■□□□□ 0.4
HDGF-203ENST00000368209 MAP3K19Q56UN5 1328 aa17.54■□□□□ 0.4
HDGF-203ENST00000368209 TRPM3Q9HCF6 1732 aaPredicted RBP17.54■□□□□ 0.4
HDGF-203ENST00000368209 KIF1AQ12756 1690 aa17.54■□□□□ 0.4
HDGF-203ENST00000368209 NEUROD2Q15784 382 aa17.53■□□□□ 0.4
HDGF-203ENST00000368209 E9PSI1 815 aa17.53■□□□□ 0.4
HDGF-203ENST00000368209 TMPOP42166 694 aaKnown RBP17.53■□□□□ 0.4
HDGF-203ENST00000368209 NLRP6P59044 892 aa17.53■□□□□ 0.4
HDGF-203ENST00000368209 EIF4A2Q14240 407 aaKnown RBP17.52■□□□□ 0.4
HDGF-203ENST00000368209 ERICH6BQ5W0A0 696 aa17.52■□□□□ 0.4
HDGF-203ENST00000368209 RRP1P56182 461 aaKnown RBP17.51■□□□□ 0.39
HDGF-203ENST00000368209 HSP90AB2PQ58FF8 381 aa17.51■□□□□ 0.39
HDGF-203ENST00000368209 WDR63Q8IWG1 891 aa17.51■□□□□ 0.39
HDGF-203ENST00000368209 ABTB2Q8N961 1025 aa17.51■□□□□ 0.39
HDGF-203ENST00000368209 TRIM35Q9UPQ4 493 aa17.51■□□□□ 0.39
HDGF-203ENST00000368209 SBNO1A3KN83 1393 aa17.51■□□□□ 0.39
HDGF-203ENST00000368209 NFAT5O94916 1531 aa17.51■□□□□ 0.39
HDGF-203ENST00000368209 PRKAR2BP31323 418 aa17.5■□□□□ 0.39
HDGF-203ENST00000368209 NUTM2GQ5VZR2 741 aa17.5■□□□□ 0.39
HDGF-203ENST00000368209 SOX12O15370 315 aa17.5■□□□□ 0.39
HDGF-203ENST00000368209 HMOX1P09601 288 aa17.5■□□□□ 0.39
HDGF-203ENST00000368209 FOXO3O43524 673 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms