RNA–Protein interactions for RNA: ENST00000368102.5

SNHG28-201, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNHG28, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-201ENST00000368102 HDGFL2Q7Z4V5 671 aaPredicted RBP18.14■□□□□ 0.49
SNHG28-201ENST00000368102 IQSEC2Q5JU85 1478 aa18.14■□□□□ 0.49
SNHG28-201ENST00000368102 CANXP27824 592 aaKnown RBP18.13■□□□□ 0.49
SNHG28-201ENST00000368102 PHF23Q9BUL5 403 aaPredicted RBP18.13■□□□□ 0.49
SNHG28-201ENST00000368102 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.12■□□□□ 0.49
SNHG28-201ENST00000368102 DLC1Q96QB1 1528 aa18.12■□□□□ 0.49
SNHG28-201ENST00000368102 FAM161AQ3B820 660 aa18.11■□□□□ 0.49
SNHG28-201ENST00000368102 RLBP1P12271 317 aa18.11■□□□□ 0.49
SNHG28-201ENST00000368102 NLRP1Q9C000 1473 aa18.11■□□□□ 0.49
SNHG28-201ENST00000368102 CLUAP1Q96AJ1 413 aa18.1■□□□□ 0.49
SNHG28-201ENST00000368102 CCDC27Q2M243 656 aa18.1■□□□□ 0.49
SNHG28-201ENST00000368102 WDR63Q8IWG1 891 aa18.1■□□□□ 0.49
SNHG28-201ENST00000368102 GSE1Q14687 1217 aa18.09■□□□□ 0.49
SNHG28-201ENST00000368102 METP08581 1390 aa18.09■□□□□ 0.49
SNHG28-201ENST00000368102 MED14O60244 1454 aa18.09■□□□□ 0.49
SNHG28-201ENST00000368102 SETD1AO15047 1707 aaKnown RBP18.08■□□□□ 0.49
SNHG28-201ENST00000368102 U2SURPO15042 1029 aaKnown RBP18.08■□□□□ 0.49
SNHG28-201ENST00000368102 TNRQ92752 1358 aa18.07■□□□□ 0.48
SNHG28-201ENST00000368102 RARSP54136 660 aaKnown RBP18.07■□□□□ 0.48
SNHG28-201ENST00000368102 NFKBIBQ15653 356 aa18.07■□□□□ 0.48
SNHG28-201ENST00000368102 TXNDC2Q86VQ3 553 aa18.07■□□□□ 0.48
SNHG28-201ENST00000368102 HDGFP51858 240 aaKnown RBP18.06■□□□□ 0.48
SNHG28-201ENST00000368102 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.06■□□□□ 0.48
SNHG28-201ENST00000368102 NRXN3Q9Y4C0 1643 aa18.06■□□□□ 0.48
SNHG28-201ENST00000368102 SEC24BO95487 1268 aa18.06■□□□□ 0.48
SNHG28-201ENST00000368102 NCBP3Q53F19 620 aaKnown RBP18.06■□□□□ 0.48
SNHG28-201ENST00000368102 COL3A1P02461 1466 aaPredicted RBP18.05■□□□□ 0.48
SNHG28-201ENST00000368102 WASLO00401 505 aaPredicted RBP18.05■□□□□ 0.48
SNHG28-201ENST00000368102 TSR2Q969E8 191 aaKnown RBP18.05■□□□□ 0.48
SNHG28-201ENST00000368102 RTN4Q9NQC3 1192 aaKnown RBP18.05■□□□□ 0.48
SNHG28-201ENST00000368102 PLEKHF1Q96S99 279 aa18.04■□□□□ 0.48
SNHG28-201ENST00000368102 DAXXQ9UER7 740 aaPredicted RBP18.04■□□□□ 0.48
SNHG28-201ENST00000368102 PCDHB15Q9Y5E8 787 aa18.04■□□□□ 0.48
SNHG28-201ENST00000368102 PDE3AQ14432 1141 aa18.03■□□□□ 0.48
SNHG28-201ENST00000368102 ATP7BP35670 1465 aa18.03■□□□□ 0.48
SNHG28-201ENST00000368102 ANKRD26Q9UPS8 1709 aa18.03■□□□□ 0.48
SNHG28-201ENST00000368102 DIAPH1O60610 1272 aaKnown RBP18.02■□□□□ 0.48
SNHG28-201ENST00000368102 TMEM2Q9UHN6 1383 aa18.02■□□□□ 0.47
SNHG28-201ENST00000368102 FBLN1P23142 703 aa18.02■□□□□ 0.47
SNHG28-201ENST00000368102 ADGRB2O60241 1585 aa18.01■□□□□ 0.47
SNHG28-201ENST00000368102 PNPLA6Q8IY17 1366 aa18.01■□□□□ 0.47
SNHG28-201ENST00000368102 MYH16Q9H6N6 1097 aa18.01■□□□□ 0.47
SNHG28-201ENST00000368102 TMPOP42166 694 aaKnown RBP18.01■□□□□ 0.47
SNHG28-201ENST00000368102 MAPK8IP3Q9UPT6 1336 aa18■□□□□ 0.47
SNHG28-201ENST00000368102 SIRT1Q96EB6 747 aa18■□□□□ 0.47
SNHG28-201ENST00000368102 PPIP5K1Q6PFW1 1433 aa18■□□□□ 0.47
SNHG28-201ENST00000368102 NUDT16Q96DE0 195 aaKnown RBP18■□□□□ 0.47
SNHG28-201ENST00000368102 POLKQ9UBT6 870 aa17.99■□□□□ 0.47
SNHG28-201ENST00000368102 FAM135BQ49AJ0 1406 aa17.99■□□□□ 0.47
SNHG28-201ENST00000368102 USP19O94966 1318 aa17.99■□□□□ 0.47
SNHG28-201ENST00000368102 NCKAP5LQ9HCH0 1330 aa17.98■□□□□ 0.47
SNHG28-201ENST00000368102 TECPR2O15040 1411 aa17.98■□□□□ 0.47
SNHG28-201ENST00000368102 CPSF1Q10570 1443 aaKnown RBP17.98■□□□□ 0.47
SNHG28-201ENST00000368102 TRIM35Q9UPQ4 493 aa17.98■□□□□ 0.47
SNHG28-201ENST00000368102 CCDC61Q9Y6R9 512 aa17.97■□□□□ 0.47
SNHG28-201ENST00000368102 KIF20BQ96Q89 1820 aa17.97■□□□□ 0.47
SNHG28-201ENST00000368102 VIRMAQ69YN4 1812 aaKnown RBP17.97■□□□□ 0.47
SNHG28-201ENST00000368102 BRPF3Q9ULD4 1205 aa17.97■□□□□ 0.47
SNHG28-201ENST00000368102 EDC4Q6P2E9 1401 aaKnown RBP17.96■□□□□ 0.47
SNHG28-201ENST00000368102 NME9Q86XW9 330 aa17.96■□□□□ 0.47
SNHG28-201ENST00000368102 LTKP29376 864 aa17.95■□□□□ 0.46
SNHG28-201ENST00000368102 UBR1Q8IWV7 1749 aa17.95■□□□□ 0.46
SNHG28-201ENST00000368102 RIPK4P57078 832 aa17.95■□□□□ 0.46
SNHG28-201ENST00000368102 PNNQ9H307 717 aaKnown RBP17.95■□□□□ 0.46
SNHG28-201ENST00000368102 ZRANB1Q9UGI0 708 aa17.95■□□□□ 0.46
SNHG28-201ENST00000368102 ADAMTS13Q76LX8 1427 aa17.94■□□□□ 0.46
SNHG28-201ENST00000368102 ROBO2Q9HCK4 1378 aa17.94■□□□□ 0.46
SNHG28-201ENST00000368102 FCHSD2O94868 740 aa17.94■□□□□ 0.46
SNHG28-201ENST00000368102 EXOSC9Q06265 439 aaKnown RBP17.94■□□□□ 0.46
SNHG28-201ENST00000368102 CPS1P31327 1500 aa17.93■□□□□ 0.46
SNHG28-201ENST00000368102 PDZRN3Q9UPQ7 1066 aa17.93■□□□□ 0.46
SNHG28-201ENST00000368102 KNDC1Q76NI1 1749 aa17.93■□□□□ 0.46
SNHG28-201ENST00000368102 EMILIN1Q9Y6C2 1016 aa17.93■□□□□ 0.46
SNHG28-201ENST00000368102 PRR36Q9H6K5 1346 aa17.92■□□□□ 0.46
SNHG28-201ENST00000368102 FRAT2O75474 233 aaPredicted RBP17.92■□□□□ 0.46
SNHG28-201ENST00000368102 RSPH6AQ9H0K4 717 aa17.91■□□□□ 0.46
SNHG28-201ENST00000368102 PLEKHG1Q9ULL1 1385 aa17.91■□□□□ 0.46
SNHG28-201ENST00000368102 CT47B1P0C2W7 299 aaPredicted RBP17.91■□□□□ 0.46
SNHG28-201ENST00000368102 PRKAR2BP31323 418 aa17.91■□□□□ 0.46
SNHG28-201ENST00000368102 IL16Q14005 1332 aa17.91■□□□□ 0.46
SNHG28-201ENST00000368102 COG3Q96JB2 828 aa17.9■□□□□ 0.46
SNHG28-201ENST00000368102 CDC42BPGQ6DT37 1551 aa17.9■□□□□ 0.46
SNHG28-201ENST00000368102 SLC26A8Q96RN1 970 aa17.9■□□□□ 0.46
SNHG28-201ENST00000368102 ZNF692Q9BU19 519 aaPredicted RBP17.89■□□□□ 0.45
SNHG28-201ENST00000368102 SMC4Q9NTJ3 1288 aa17.89■□□□□ 0.45
SNHG28-201ENST00000368102 HMOX1P09601 288 aa17.89■□□□□ 0.45
SNHG28-201ENST00000368102 SSH1Q8WYL5 1049 aa17.89■□□□□ 0.45
SNHG28-201ENST00000368102 LRRC7Q96NW7 1537 aa17.88■□□□□ 0.45
SNHG28-201ENST00000368102 AATKQ6ZMQ8 1374 aa17.88■□□□□ 0.45
SNHG28-201ENST00000368102 MVPQ14764 893 aaKnown RBP17.88■□□□□ 0.45
SNHG28-201ENST00000368102 FTSJ3Q8IY81 847 aaKnown RBP17.88■□□□□ 0.45
SNHG28-201ENST00000368102 EID1Q9Y6B2 187 aa17.88■□□□□ 0.45
SNHG28-201ENST00000368102 TRIM27P14373 513 aa17.87■□□□□ 0.45
SNHG28-201ENST00000368102 IL13P35225 146 aa17.87■□□□□ 0.45
SNHG28-201ENST00000368102 AAMPQ13685 434 aa17.87■□□□□ 0.45
SNHG28-201ENST00000368102 RRS1Q15050 365 aaKnown RBP17.87■□□□□ 0.45
SNHG28-201ENST00000368102 ZKSCAN2Q63HK3 967 aa17.87■□□□□ 0.45
SNHG28-201ENST00000368102 PHACTR3Q96KR7 559 aa17.87■□□□□ 0.45
SNHG28-201ENST00000368102 SLKQ9H2G2 1235 aaPredicted RBP17.87■□□□□ 0.45
SNHG28-201ENST00000368102 NUTM2FA1L443 756 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms