RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 ZNF772Q68DY9 489 aaPredicted RBP13.99□□□□□ -0.17
CD48-202ENST00000368046 CCER1Q8TC90 406 aaPredicted RBP13.99□□□□□ -0.17
CD48-202ENST00000368046 PLEKHG3A1L390 1219 aa13.98□□□□□ -0.17
CD48-202ENST00000368046 POTEAQ6S8J7 498 aa13.98□□□□□ -0.17
CD48-202ENST00000368046 CABP2Q9NPB3 220 aa13.98□□□□□ -0.17
CD48-202ENST00000368046 TULP4Q9NRJ4 1543 aa13.98□□□□□ -0.17
CD48-202ENST00000368046 ARHGEF28Q8N1W1 1705 aaKnown RBP13.98□□□□□ -0.17
CD48-202ENST00000368046 LRP6O75581 1613 aa13.97□□□□□ -0.17
CD48-202ENST00000368046 TRPM1Q7Z4N2 1603 aa13.97□□□□□ -0.17
CD48-202ENST00000368046 EVC2Q86UK5 1308 aa13.97□□□□□ -0.17
CD48-202ENST00000368046 ADAMTS2O95450 1211 aa13.97□□□□□ -0.17
CD48-202ENST00000368046 LMOD2Q6P5Q4 547 aa13.97□□□□□ -0.17
CD48-202ENST00000368046 NGLY1Q96IV0 654 aa13.97□□□□□ -0.17
CD48-202ENST00000368046 SBNO1A3KN83 1393 aa13.96□□□□□ -0.17
CD48-202ENST00000368046 C8orf37Q96NL8 207 aa13.96□□□□□ -0.17
CD48-202ENST00000368046 ACEP12821 1306 aa13.95□□□□□ -0.18
CD48-202ENST00000368046 KIF1AQ12756 1690 aa13.95□□□□□ -0.18
CD48-202ENST00000368046 USP32Q8NFA0 1604 aa13.95□□□□□ -0.18
CD48-202ENST00000368046 SOCS7O14512 581 aa13.94□□□□□ -0.18
CD48-202ENST00000368046 SLC24A1O60721 1099 aa13.94□□□□□ -0.18
CD48-202ENST00000368046 PAK3O75914 559 aaPredicted RBP13.94□□□□□ -0.18
CD48-202ENST00000368046 CABP1Q9NZU7 370 aa13.94□□□□□ -0.18
CD48-202ENST00000368046 RGPD8O14715 1765 aaPredicted RBP13.94□□□□□ -0.18
CD48-202ENST00000368046 ATP7BP35670 1465 aa13.93□□□□□ -0.18
CD48-202ENST00000368046 AFF2P51816 1311 aa13.93□□□□□ -0.18
CD48-202ENST00000368046 FNBP4Q8N3X1 1017 aaPredicted RBP13.93□□□□□ -0.18
CD48-202ENST00000368046 ARHGEF10O15013 1369 aa13.93□□□□□ -0.18
CD48-202ENST00000368046 RALGAPBQ86X10 1494 aa13.93□□□□□ -0.18
CD48-202ENST00000368046 TNS3Q68CZ2 1445 aa13.92□□□□□ -0.18
CD48-202ENST00000368046 HAP1P54257 671 aaPredicted RBP13.92□□□□□ -0.18
CD48-202ENST00000368046 CABLES1Q8TDN4 633 aa13.92□□□□□ -0.18
CD48-202ENST00000368046 QTRT2Q9H974 415 aaKnown RBP13.92□□□□□ -0.18
CD48-202ENST00000368046 POLR3AO14802 1390 aaPredicted RBP13.92□□□□□ -0.18
CD48-202ENST00000368046 PRKAR2AP13861 404 aaKnown RBP13.91□□□□□ -0.18
CD48-202ENST00000368046 LHX8Q68G74 356 aa13.91□□□□□ -0.18
CD48-202ENST00000368046 ZNF692Q9BU19 519 aaPredicted RBP13.91□□□□□ -0.18
CD48-202ENST00000368046 ST20-MTHFSA0A0A6YYL1 179 aa13.9□□□□□ -0.18
CD48-202ENST00000368046 RXRBP28702 533 aa13.9□□□□□ -0.18
CD48-202ENST00000368046 PUS7Q96PZ0 661 aaKnown RBP13.9□□□□□ -0.18
CD48-202ENST00000368046 USP21Q9UK80 565 aa13.9□□□□□ -0.18
CD48-202ENST00000368046 SBNO2Q9Y2G9 1366 aa13.9□□□□□ -0.18
CD48-202ENST00000368046 COL22A1Q8NFW1 1626 aaPredicted RBP13.9□□□□□ -0.19
CD48-202ENST00000368046 PPIP5K1Q6PFW1 1433 aa13.9□□□□□ -0.19
CD48-202ENST00000368046 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
CD48-202ENST00000368046 BRD4O60885 1362 aaPredicted RBP13.87□□□□□ -0.19
CD48-202ENST00000368046 RBM6P78332 1123 aaKnown RBP13.87□□□□□ -0.19
CD48-202ENST00000368046 ABTB2Q8N961 1025 aa13.87□□□□□ -0.19
CD48-202ENST00000368046 TESK2Q96S53 571 aa13.87□□□□□ -0.19
CD48-202ENST00000368046 TRPC5Q9UL62 973 aaPredicted RBP13.87□□□□□ -0.19
CD48-202ENST00000368046 QRICH2Q9H0J4 1663 aa13.87□□□□□ -0.19
CD48-202ENST00000368046 ATAD2Q6PL18 1390 aa13.85□□□□□ -0.19
CD48-202ENST00000368046 FAM83GA6ND36 823 aa13.85□□□□□ -0.19
CD48-202ENST00000368046 NLRP13Q86W25 1043 aa13.85□□□□□ -0.19
CD48-202ENST00000368046 C19orf67A6NJJ6 358 aa13.84□□□□□ -0.19
CD48-202ENST00000368046 GABBR2O75899 941 aa13.84□□□□□ -0.19
CD48-202ENST00000368046 NUTM2GQ5VZR2 741 aa13.84□□□□□ -0.19
CD48-202ENST00000368046 UNC5CLQ8IV45 518 aa13.84□□□□□ -0.19
CD48-202ENST00000368046 ITSN1Q15811 1721 aa13.84□□□□□ -0.19
CD48-202ENST00000368046 TMC1Q8TDI8 760 aa13.83□□□□□ -0.2
CD48-202ENST00000368046 SLC12A5Q9H2X9 1139 aa13.83□□□□□ -0.2
CD48-202ENST00000368046 BCL9LQ86UU0 1499 aa13.82□□□□□ -0.2
CD48-202ENST00000368046 TMF1P82094 1093 aa13.82□□□□□ -0.2
CD48-202ENST00000368046 USP47Q96K76 1375 aa13.82□□□□□ -0.2
CD48-202ENST00000368046 TRPM3Q9HCF6 1732 aaPredicted RBP13.81□□□□□ -0.2
CD48-202ENST00000368046 SPDYE2BA6NHP3 402 aa13.81□□□□□ -0.2
CD48-202ENST00000368046 GCP02774 474 aa13.81□□□□□ -0.2
CD48-202ENST00000368046 SPDYE6P0CI01 402 aa13.81□□□□□ -0.2
CD48-202ENST00000368046 NLRP6P59044 892 aa13.81□□□□□ -0.2
CD48-202ENST00000368046 SPDYE2Q495Y8 402 aa13.81□□□□□ -0.2
CD48-202ENST00000368046 HDGFL2Q7Z4V5 671 aaPredicted RBP13.81□□□□□ -0.2
CD48-202ENST00000368046 GJD4Q96KN9 370 aaPredicted RBP13.81□□□□□ -0.2
CD48-202ENST00000368046 CLEC11AQ9Y240 323 aa13.81□□□□□ -0.2
CD48-202ENST00000368046 TTC21BQ7Z4L5 1316 aa13.81□□□□□ -0.2
CD48-202ENST00000368046 TOPAZ1Q8N9V7 1692 aa13.81□□□□□ -0.2
CD48-202ENST00000368046 USP6P35125 1406 aa13.81□□□□□ -0.2
CD48-202ENST00000368046 CPSF1Q10570 1443 aaKnown RBP13.81□□□□□ -0.2
CD48-202ENST00000368046 SLIT2O94813 1529 aa13.8□□□□□ -0.2
CD48-202ENST00000368046 ZC3H6P61129 1189 aaKnown RBP13.8□□□□□ -0.2
CD48-202ENST00000368046 CDCA8Q53HL2 280 aa13.8□□□□□ -0.2
CD48-202ENST00000368046 BTG4Q9NY30 223 aa13.8□□□□□ -0.2
CD48-202ENST00000368046 TERF2IPQ9NYB0 399 aa13.8□□□□□ -0.2
CD48-202ENST00000368046 KTN1Q86UP2 1357 aaKnown RBP13.8□□□□□ -0.2
CD48-202ENST00000368046 SSH2Q76I76 1423 aa13.8□□□□□ -0.2
CD48-202ENST00000368046 ALS2Q96Q42 1657 aa13.79□□□□□ -0.2
CD48-202ENST00000368046 PRDM11Q9NQV5 511 aa13.79□□□□□ -0.2
CD48-202ENST00000368046 TTC21AQ8NDW8 1320 aa13.79□□□□□ -0.2
CD48-202ENST00000368046 ATRNO75882 1429 aa13.79□□□□□ -0.2
CD48-202ENST00000368046 VPS72Q15906 364 aa13.78□□□□□ -0.2
CD48-202ENST00000368046 CDK12Q9NYV4 1490 aaPredicted RBP13.78□□□□□ -0.2
CD48-202ENST00000368046 USP19O94966 1318 aa13.77□□□□□ -0.21
CD48-202ENST00000368046 EIF4G2P78344 907 aaKnown RBP eCLIP13.77□□□□□ -0.21
CD48-202ENST00000368046 KIAA0232Q92628 1395 aa13.76□□□□□ -0.21
CD48-202ENST00000368046 CHRNA2Q15822 529 aa13.76□□□□□ -0.21
CD48-202ENST00000368046 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.76□□□□□ -0.21
CD48-202ENST00000368046 SPDYE1Q8NFV5 336 aaPredicted RBP13.76□□□□□ -0.21
CD48-202ENST00000368046 CCDC9Q9Y3X0 531 aaKnown RBP13.76□□□□□ -0.21
CD48-202ENST00000368046 NINLQ9Y2I6 1382 aa13.75□□□□□ -0.21
CD48-202ENST00000368046 ONECUT3O60422 494 aaPredicted RBP13.75□□□□□ -0.21
CD48-202ENST00000368046 KCNH5Q8NCM2 988 aa13.75□□□□□ -0.21
CD48-202ENST00000368046 MARF1Q9Y4F3 1742 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms