RNA–Protein interactions for RNA: ENST00000367379.5

PTPRC-204, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 5

Gene PTPRC, Length 517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-204ENST00000367379 F12P00748 615 aaPredicted RBP12.12□□□□□ -0.47
PTPRC-204ENST00000367379 VARSP26640 1264 aaKnown RBP12.12□□□□□ -0.47
PTPRC-204ENST00000367379 TUSC1Q2TAM9 212 aa12.12□□□□□ -0.47
PTPRC-204ENST00000367379 MYSM1Q5VVJ2 828 aa12.12□□□□□ -0.47
PTPRC-204ENST00000367379 CABLES1Q8TDN4 633 aa12.12□□□□□ -0.47
PTPRC-204ENST00000367379 KIFC2Q96AC6 838 aa12.12□□□□□ -0.47
PTPRC-204ENST00000367379 WFS1O76024 890 aa12.11□□□□□ -0.47
PTPRC-204ENST00000367379 SLC24A3Q9HC58 644 aa12.11□□□□□ -0.47
PTPRC-204ENST00000367379 LIMD1Q9UGP4 676 aa12.11□□□□□ -0.47
PTPRC-204ENST00000367379 TLL2Q9Y6L7 1015 aa12.11□□□□□ -0.47
PTPRC-204ENST00000367379 CTHP32929 405 aa12.1□□□□□ -0.47
PTPRC-204ENST00000367379 CAPN5O15484 640 aaPredicted RBP12.09□□□□□ -0.47
PTPRC-204ENST00000367379 MAP10Q9P2G4 905 aa12.09□□□□□ -0.47
PTPRC-204ENST00000367379 TRIM46Q7Z4K8 759 aa12.08□□□□□ -0.48
PTPRC-204ENST00000367379 PLEKHG3A1L390 1219 aa12.07□□□□□ -0.48
PTPRC-204ENST00000367379 PER1O15534 1290 aaPredicted RBP12.07□□□□□ -0.48
PTPRC-204ENST00000367379 QPCTQ16769 361 aa12.07□□□□□ -0.48
PTPRC-204ENST00000367379 CSPP1Q1MSJ5 1256 aa12.07□□□□□ -0.48
PTPRC-204ENST00000367379 LILRB3O75022 631 aa12.06□□□□□ -0.48
PTPRC-204ENST00000367379 BMP1P13497 986 aa12.05□□□□□ -0.48
PTPRC-204ENST00000367379 TERTO14746 1132 aaKnown RBP12.04□□□□□ -0.48
PTPRC-204ENST00000367379 LCE2CQ5TA81 110 aa12.04□□□□□ -0.48
PTPRC-204ENST00000367379 FOXJ1Q92949 421 aa12.04□□□□□ -0.48
PTPRC-204ENST00000367379 NNTQ13423 1086 aa12.03□□□□□ -0.48
PTPRC-204ENST00000367379 FAM174AQ8TBP5 190 aa12.03□□□□□ -0.48
PTPRC-204ENST00000367379 CDK15Q96Q40 435 aa12.03□□□□□ -0.48
PTPRC-204ENST00000367379 WIPF1O43516 503 aa12.02□□□□□ -0.49
PTPRC-204ENST00000367379 NUTM2BA6NNL0 878 aaPredicted RBP12□□□□□ -0.49
PTPRC-204ENST00000367379 NUTM2EB1AL46 878 aaPredicted RBP12□□□□□ -0.49
PTPRC-204ENST00000367379 ADH1CP00326 375 aa12□□□□□ -0.49
PTPRC-204ENST00000367379 C4orf48Q5BLP8 95 aa12□□□□□ -0.49
PTPRC-204ENST00000367379 RTL5Q5HYW3 569 aaPredicted RBP12□□□□□ -0.49
PTPRC-204ENST00000367379 NUTM2DQ5VT03 806 aaPredicted RBP12□□□□□ -0.49
PTPRC-204ENST00000367379 NUTM2AQ8IVF1 878 aaPredicted RBP12□□□□□ -0.49
PTPRC-204ENST00000367379 KLF16Q9BXK1 252 aaPredicted RBP12□□□□□ -0.49
PTPRC-204ENST00000367379 TIMP2P16035 220 aa11.99□□□□□ -0.49
PTPRC-204ENST00000367379 CLK2P49760 499 aaKnown RBP11.99□□□□□ -0.49
PTPRC-204ENST00000367379 TSC1Q92574 1164 aa11.98□□□□□ -0.49
PTPRC-204ENST00000367379 RSPH6AQ9H0K4 717 aa11.98□□□□□ -0.49
PTPRC-204ENST00000367379 BPHLQ86WA6 291 aaPredicted RBP11.96□□□□□ -0.49
PTPRC-204ENST00000367379 ZFP42Q96MM3 310 aa11.96□□□□□ -0.49
PTPRC-204ENST00000367379 WDR4P57081 412 aaKnown RBP11.95□□□□□ -0.5
PTPRC-204ENST00000367379 SH3RF1Q7Z6J0 888 aa11.95□□□□□ -0.5
PTPRC-204ENST00000367379 ARMC2Q8NEN0 867 aa11.95□□□□□ -0.5
PTPRC-204ENST00000367379 HELBQ8NG08 1087 aaPredicted RBP11.95□□□□□ -0.5
PTPRC-204ENST00000367379 C1QTNF2Q9BXJ5 285 aa11.95□□□□□ -0.5
PTPRC-204ENST00000367379 GRM5P41594 1212 aa11.94□□□□□ -0.5
PTPRC-204ENST00000367379 NR5A1Q13285 461 aa11.94□□□□□ -0.5
PTPRC-204ENST00000367379 NXF1Q9UBU9 619 aaKnown RBP11.94□□□□□ -0.5
PTPRC-204ENST00000367379 MRPL14Q6P1L8 145 aaKnown RBP11.93□□□□□ -0.5
PTPRC-204ENST00000367379 POLR3EQ9NVU0 708 aa11.93□□□□□ -0.5
PTPRC-204ENST00000367379 ARID5BQ14865 1188 aa11.92□□□□□ -0.5
PTPRC-204ENST00000367379 AGERQ15109 404 aa11.92□□□□□ -0.5
PTPRC-204ENST00000367379 SH3BP5LQ7L8J4 393 aa11.92□□□□□ -0.5
PTPRC-204ENST00000367379 NPAS3Q8IXF0 933 aa11.92□□□□□ -0.5
PTPRC-204ENST00000367379 NR3C2P08235 984 aa11.91□□□□□ -0.5
PTPRC-204ENST00000367379 NBPF14Q5TI25 921 aa11.91□□□□□ -0.5
PTPRC-204ENST00000367379 INSM1Q01101 510 aaPredicted RBP11.89□□□□□ -0.51
PTPRC-204ENST00000367379 TRMT44Q8IYL2 757 aaKnown RBP11.89□□□□□ -0.51
PTPRC-204ENST00000367379 ITPKCQ96DU7 683 aa11.89□□□□□ -0.51
PTPRC-204ENST00000367379 ZFAND3Q9H8U3 227 aa11.89□□□□□ -0.51
PTPRC-204ENST00000367379 MAP4K5Q9Y4K4 846 aa11.89□□□□□ -0.51
PTPRC-204ENST00000367379 ZIC2O95409 532 aaPredicted RBP11.88□□□□□ -0.51
PTPRC-204ENST00000367379 SCARF1Q14162 830 aa11.88□□□□□ -0.51
PTPRC-204ENST00000367379 SLC16A10Q8TF71 515 aa11.88□□□□□ -0.51
PTPRC-204ENST00000367379 PURBQ96QR8 312 aaKnown RBP11.88□□□□□ -0.51
PTPRC-204ENST00000367379 CTDSPL2Q05D32 466 aa11.87□□□□□ -0.51
PTPRC-204ENST00000367379 SKIV2LQ15477 1246 aaKnown RBP11.87□□□□□ -0.51
PTPRC-204ENST00000367379 GPKOWQ92917 476 aaPredicted RBP eCLIP11.87□□□□□ -0.51
PTPRC-204ENST00000367379 STK17AQ9UEE5 414 aa11.87□□□□□ -0.51
PTPRC-204ENST00000367379 H3BM21 787 aa11.86□□□□□ -0.51
PTPRC-204ENST00000367379 FBXO31Q5XUX0 539 aaPredicted RBP11.86□□□□□ -0.51
PTPRC-204ENST00000367379 SH3D19Q5HYK7 790 aa11.85□□□□□ -0.51
PTPRC-204ENST00000367379 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.85□□□□□ -0.51
PTPRC-204ENST00000367379 KDM4CQ9H3R0 1056 aa11.85□□□□□ -0.51
PTPRC-204ENST00000367379 GPBP1L1Q9HC44 474 aaPredicted RBP11.84□□□□□ -0.51
PTPRC-204ENST00000367379 PPP2R2DQ66LE6 453 aa11.83□□□□□ -0.52
PTPRC-204ENST00000367379 IRF7Q92985 503 aa11.83□□□□□ -0.52
PTPRC-204ENST00000367379 FSHRP23945 695 aa11.82□□□□□ -0.52
PTPRC-204ENST00000367379 VEGFBP49765 207 aa11.82□□□□□ -0.52
PTPRC-204ENST00000367379 MEIOBQ8N635 442 aa11.82□□□□□ -0.52
PTPRC-204ENST00000367379 PROCA1Q8NCQ7 364 aaPredicted RBP11.82□□□□□ -0.52
PTPRC-204ENST00000367379 DDRGK1Q96HY6 314 aa11.82□□□□□ -0.52
PTPRC-204ENST00000367379 FAM117AQ9C073 453 aa11.82□□□□□ -0.52
PTPRC-204ENST00000367379 MAGEB6P1A0A0J9YX57 407 aa11.81□□□□□ -0.52
PTPRC-204ENST00000367379 GMPRP36959 345 aa11.81□□□□□ -0.52
PTPRC-204ENST00000367379 ERFEQ4G0M1 354 aa11.81□□□□□ -0.52
PTPRC-204ENST00000367379 PDXDC2PQ6P474 469 aa11.81□□□□□ -0.52
PTPRC-204ENST00000367379 VASH1Q7L8A9 365 aaPredicted RBP11.81□□□□□ -0.52
PTPRC-204ENST00000367379 LRRN4Q8WUT4 740 aa11.81□□□□□ -0.52
PTPRC-204ENST00000367379 SOBPA7XYQ1 873 aa11.8□□□□□ -0.52
PTPRC-204ENST00000367379 FKBPLQ9UIM3 349 aa11.79□□□□□ -0.52
PTPRC-204ENST00000367379 ERBB4Q15303 1308 aa11.79□□□□□ -0.52
PTPRC-204ENST00000367379 LINC00528Q8N1L1 170 aa11.78□□□□□ -0.52
PTPRC-204ENST00000367379 CARD14Q9BXL6 1004 aa11.78□□□□□ -0.52
PTPRC-204ENST00000367379 LORP23490 312 aaPredicted RBP11.77□□□□□ -0.53
PTPRC-204ENST00000367379 C6orf118Q5T5N4 469 aa11.77□□□□□ -0.53
PTPRC-204ENST00000367379 CCDC116Q8IYX3 515 aa11.77□□□□□ -0.53
PTPRC-204ENST00000367379 BCANQ96GW7 911 aa11.77□□□□□ -0.53
PTPRC-204ENST00000367379 EMILIN1Q9Y6C2 1016 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms