RNA–Protein interactions for RNA: ENST00000367004.3

TRAF5-203, Transcript of TNF receptor associated factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF5, Length 1,827 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF5-203ENST00000367004 CT47B1P0C2W7 299 aaPredicted RBP16.48■□□□□ 0.23
TRAF5-203ENST00000367004 A2ML1A8K2U0 1454 aa16.47■□□□□ 0.23
TRAF5-203ENST00000367004 RLBP1P12271 317 aa16.47■□□□□ 0.23
TRAF5-203ENST00000367004 HDGFL2Q7Z4V5 671 aaPredicted RBP16.47■□□□□ 0.23
TRAF5-203ENST00000367004 PMFBP1Q8TBY8 1022 aa16.47■□□□□ 0.23
TRAF5-203ENST00000367004 CDC42BPGQ6DT37 1551 aa16.47■□□□□ 0.23
TRAF5-203ENST00000367004 PNPLA6Q8IY17 1366 aa16.47■□□□□ 0.23
TRAF5-203ENST00000367004 TMPOP42166 694 aaKnown RBP16.47■□□□□ 0.23
TRAF5-203ENST00000367004 CDK19Q9BWU1 502 aa16.47■□□□□ 0.23
TRAF5-203ENST00000367004 SENP3Q9H4L4 574 aaPredicted RBP16.47■□□□□ 0.23
TRAF5-203ENST00000367004 USP35Q9P2H5 1018 aa16.47■□□□□ 0.23
TRAF5-203ENST00000367004 LAS1LQ9Y4W2 734 aaKnown RBP16.47■□□□□ 0.23
TRAF5-203ENST00000367004 TSPOAP1O95153 1857 aa16.46■□□□□ 0.23
TRAF5-203ENST00000367004 TNNQ9UQP3 1299 aa16.46■□□□□ 0.23
TRAF5-203ENST00000367004 IL16Q14005 1332 aa16.45■□□□□ 0.22
TRAF5-203ENST00000367004 U2SURPO15042 1029 aaKnown RBP16.45■□□□□ 0.22
TRAF5-203ENST00000367004 TRIM35Q9UPQ4 493 aa16.45■□□□□ 0.22
TRAF5-203ENST00000367004 ATP7BP35670 1465 aa16.44■□□□□ 0.22
TRAF5-203ENST00000367004 ZMYM3Q14202 1370 aa16.44■□□□□ 0.22
TRAF5-203ENST00000367004 RIMS2Q9UQ26 1411 aa16.44■□□□□ 0.22
TRAF5-203ENST00000367004 BCL2L13Q9BXK5 485 aa16.44■□□□□ 0.22
TRAF5-203ENST00000367004 STAG3Q9UJ98 1225 aa16.44■□□□□ 0.22
TRAF5-203ENST00000367004 PCDHB15Q9Y5E8 787 aa16.44■□□□□ 0.22
TRAF5-203ENST00000367004 NEFMP07197 916 aa16.42■□□□□ 0.22
TRAF5-203ENST00000367004 DIAPH1O60610 1272 aaKnown RBP16.42■□□□□ 0.22
TRAF5-203ENST00000367004 MVPQ14764 893 aaKnown RBP16.42■□□□□ 0.22
TRAF5-203ENST00000367004 ZKSCAN2Q63HK3 967 aa16.42■□□□□ 0.22
TRAF5-203ENST00000367004 CABP1Q9NZU7 370 aa16.42■□□□□ 0.22
TRAF5-203ENST00000367004 NRXN3Q9Y4C0 1643 aa16.41■□□□□ 0.22
TRAF5-203ENST00000367004 TSR2Q969E8 191 aaKnown RBP16.41■□□□□ 0.22
TRAF5-203ENST00000367004 PNNQ9H307 717 aaKnown RBP16.41■□□□□ 0.22
TRAF5-203ENST00000367004 EXOSC9Q06265 439 aaKnown RBP16.4■□□□□ 0.22
TRAF5-203ENST00000367004 DZIP1LQ8IYY4 767 aaKnown RBP16.4■□□□□ 0.22
TRAF5-203ENST00000367004 USP19O94966 1318 aa16.4■□□□□ 0.22
TRAF5-203ENST00000367004 LRRC7Q96NW7 1537 aa16.39■□□□□ 0.21
TRAF5-203ENST00000367004 RWDD1Q9H446 243 aaPredicted RBP16.39■□□□□ 0.21
TRAF5-203ENST00000367004 KNDC1Q76NI1 1749 aa16.38■□□□□ 0.21
TRAF5-203ENST00000367004 DAXXQ9UER7 740 aaPredicted RBP16.38■□□□□ 0.21
TRAF5-203ENST00000367004 FAM135BQ49AJ0 1406 aa16.38■□□□□ 0.21
TRAF5-203ENST00000367004 SLC4A3P48751 1232 aa16.38■□□□□ 0.21
TRAF5-203ENST00000367004 PDZRN3Q9UPQ7 1066 aa16.38■□□□□ 0.21
TRAF5-203ENST00000367004 MAP2P11137 1827 aaKnown RBP16.37■□□□□ 0.21
TRAF5-203ENST00000367004 FCHSD2O94868 740 aa16.37■□□□□ 0.21
TRAF5-203ENST00000367004 RIPK4P57078 832 aa16.37■□□□□ 0.21
TRAF5-203ENST00000367004 WAPLQ7Z5K2 1190 aa16.37■□□□□ 0.21
TRAF5-203ENST00000367004 SMC4Q9NTJ3 1288 aa16.37■□□□□ 0.21
TRAF5-203ENST00000367004 CPSF1Q10570 1443 aaKnown RBP16.36■□□□□ 0.21
TRAF5-203ENST00000367004 SSH1Q8WYL5 1049 aa16.36■□□□□ 0.21
TRAF5-203ENST00000367004 KIF13AQ9H1H9 1805 aa16.36■□□□□ 0.21
TRAF5-203ENST00000367004 FTSJ3Q8IY81 847 aaKnown RBP16.35■□□□□ 0.21
TRAF5-203ENST00000367004 POLKQ9UBT6 870 aa16.35■□□□□ 0.21
TRAF5-203ENST00000367004 EDC4Q6P2E9 1401 aaKnown RBP16.35■□□□□ 0.21
TRAF5-203ENST00000367004 RSPH6AQ9H0K4 717 aa16.35■□□□□ 0.21
TRAF5-203ENST00000367004 TRIM27P14373 513 aa16.34■□□□□ 0.21
TRAF5-203ENST00000367004 MON2Q7Z3U7 1717 aa16.34■□□□□ 0.21
TRAF5-203ENST00000367004 SEC24BO95487 1268 aa16.33■□□□□ 0.21
TRAF5-203ENST00000367004 ATF7IPQ6VMQ6 1270 aa16.33■□□□□ 0.21
TRAF5-203ENST00000367004 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.33■□□□□ 0.21
TRAF5-203ENST00000367004 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.33■□□□□ 0.21
TRAF5-203ENST00000367004 PPIP5K1Q6PFW1 1433 aa16.33■□□□□ 0.2
TRAF5-203ENST00000367004 WASLO00401 505 aaPredicted RBP16.33■□□□□ 0.2
TRAF5-203ENST00000367004 DDX19BQ9UMR2 479 aa16.33■□□□□ 0.2
TRAF5-203ENST00000367004 HDAC1Q13547 482 aaPredicted RBP16.32■□□□□ 0.2
TRAF5-203ENST00000367004 NFKBIBQ15653 356 aa16.32■□□□□ 0.2
TRAF5-203ENST00000367004 SIRT1Q96EB6 747 aa16.32■□□□□ 0.2
TRAF5-203ENST00000367004 AKAP12Q02952 1782 aa16.32■□□□□ 0.2
TRAF5-203ENST00000367004 METP08581 1390 aa16.32■□□□□ 0.2
TRAF5-203ENST00000367004 CDK12Q9NYV4 1490 aaPredicted RBP16.32■□□□□ 0.2
TRAF5-203ENST00000367004 TECPR2O15040 1411 aa16.31■□□□□ 0.2
TRAF5-203ENST00000367004 CPS1P31327 1500 aa16.31■□□□□ 0.2
TRAF5-203ENST00000367004 ALDH1L2Q3SY69 923 aa16.31■□□□□ 0.2
TRAF5-203ENST00000367004 NOB1Q9ULX3 412 aaKnown RBP16.31■□□□□ 0.2
TRAF5-203ENST00000367004 KIF16BQ96L93 1317 aa16.31■□□□□ 0.2
TRAF5-203ENST00000367004 PRKAR2BP31323 418 aa16.31■□□□□ 0.2
TRAF5-203ENST00000367004 AATKQ6ZMQ8 1374 aa16.31■□□□□ 0.2
TRAF5-203ENST00000367004 MLECQ14165 292 aa16.3■□□□□ 0.2
TRAF5-203ENST00000367004 IPO8O15397 1037 aaKnown RBP16.29■□□□□ 0.2
TRAF5-203ENST00000367004 BRPF1P55201 1214 aaPredicted RBP16.29■□□□□ 0.2
TRAF5-203ENST00000367004 NFE2L2Q16236 605 aa16.29■□□□□ 0.2
TRAF5-203ENST00000367004 ITSN1Q15811 1721 aa16.29■□□□□ 0.2
TRAF5-203ENST00000367004 FBLN1P23142 703 aa16.29■□□□□ 0.2
TRAF5-203ENST00000367004 ITPRIPQ8IWB1 547 aa16.29■□□□□ 0.2
TRAF5-203ENST00000367004 ZNF428Q96B54 188 aa16.29■□□□□ 0.2
TRAF5-203ENST00000367004 C3P01024 1663 aa16.28■□□□□ 0.2
TRAF5-203ENST00000367004 IL13P35225 146 aa16.28■□□□□ 0.2
TRAF5-203ENST00000367004 TMEM57Q8N5G2 664 aa16.28■□□□□ 0.2
TRAF5-203ENST00000367004 NME9Q86XW9 330 aa16.26■□□□□ 0.19
TRAF5-203ENST00000367004 SMC5Q8IY18 1101 aa16.26■□□□□ 0.19
TRAF5-203ENST00000367004 NUDT16Q96DE0 195 aaKnown RBP16.26■□□□□ 0.19
TRAF5-203ENST00000367004 ZBTB40Q9NUA8 1239 aa16.26■□□□□ 0.19
TRAF5-203ENST00000367004 EMILIN1Q9Y6C2 1016 aa16.26■□□□□ 0.19
TRAF5-203ENST00000367004 CALD1Q05682 793 aaKnown RBP16.26■□□□□ 0.19
TRAF5-203ENST00000367004 PHACTR3Q96KR7 559 aa16.26■□□□□ 0.19
TRAF5-203ENST00000367004 TBC1D32Q96NH3 1257 aa16.26■□□□□ 0.19
TRAF5-203ENST00000367004 UBR1Q8IWV7 1749 aa16.26■□□□□ 0.19
TRAF5-203ENST00000367004 DLG5Q8TDM6 1919 aa16.25■□□□□ 0.19
TRAF5-203ENST00000367004 HDGFP51858 240 aaKnown RBP16.25■□□□□ 0.19
TRAF5-203ENST00000367004 BECN1Q14457 450 aa16.25■□□□□ 0.19
TRAF5-203ENST00000367004 TXNDC2Q86VQ3 553 aa16.25■□□□□ 0.19
TRAF5-203ENST00000367004 UPF2Q9HAU5 1272 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms