RNA–Protein interactions for RNA: ENST00000366960.7

RPS6KC1-202, Transcript of ribosomal protein S6 kinase C1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPS6KC1, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-202ENST00000366960 PSMA5P28066 241 aa17.16■□□□□ 0.34
RPS6KC1-202ENST00000366960 GCC1Q96CN9 775 aa17.16■□□□□ 0.34
RPS6KC1-202ENST00000366960 ATF7IPQ6VMQ6 1270 aa17.16■□□□□ 0.34
RPS6KC1-202ENST00000366960 CABP1Q9NZU7 370 aa17.16■□□□□ 0.34
RPS6KC1-202ENST00000366960 NAP1L1P55209 391 aaKnown RBP17.16■□□□□ 0.34
RPS6KC1-202ENST00000366960 ABTB2Q8N961 1025 aa17.15■□□□□ 0.34
RPS6KC1-202ENST00000366960 TEX35Q5T0J7 233 aa17.15■□□□□ 0.34
RPS6KC1-202ENST00000366960 TXNDC2Q86VQ3 553 aa17.15■□□□□ 0.34
RPS6KC1-202ENST00000366960 TSPY26PQ9H489 355 aa17.15■□□□□ 0.34
RPS6KC1-202ENST00000366960 GNAI2P04899 355 aa17.15■□□□□ 0.34
RPS6KC1-202ENST00000366960 STK3Q13188 491 aa17.14■□□□□ 0.34
RPS6KC1-202ENST00000366960 NINLQ9Y2I6 1382 aa17.14■□□□□ 0.33
RPS6KC1-202ENST00000366960 MVPQ14764 893 aaKnown RBP17.14■□□□□ 0.33
RPS6KC1-202ENST00000366960 KINO60870 393 aaKnown RBP17.13■□□□□ 0.33
RPS6KC1-202ENST00000366960 HDGFL1Q5TGJ6 251 aa17.13■□□□□ 0.33
RPS6KC1-202ENST00000366960 SIL1Q9H173 461 aa17.13■□□□□ 0.33
RPS6KC1-202ENST00000366960 TRIM34Q9BYJ4 488 aa17.13■□□□□ 0.33
RPS6KC1-202ENST00000366960 SMC2O95347 1197 aa17.13■□□□□ 0.33
RPS6KC1-202ENST00000366960 SETQ01105 290 aaPredicted RBP17.12■□□□□ 0.33
RPS6KC1-202ENST00000366960 OSCARQ8IYS5 282 aa17.12■□□□□ 0.33
RPS6KC1-202ENST00000366960 STK11IPQ8N1F8 1099 aa17.12■□□□□ 0.33
RPS6KC1-202ENST00000366960 GAS2L2Q8NHY3 880 aa17.12■□□□□ 0.33
RPS6KC1-202ENST00000366960 OLFM4Q6UX06 510 aa17.12■□□□□ 0.33
RPS6KC1-202ENST00000366960 NAT10Q9H0A0 1025 aaKnown RBP17.12■□□□□ 0.33
RPS6KC1-202ENST00000366960 TCEAL9Q9UHQ7 104 aa17.12■□□□□ 0.33
RPS6KC1-202ENST00000366960 K7ELQ4 463 aaPredicted RBP17.12■□□□□ 0.33
RPS6KC1-202ENST00000366960 ARGLU1Q9NWB6 273 aaPredicted RBP17.12■□□□□ 0.33
RPS6KC1-202ENST00000366960 C20orf194Q5TEA3 1177 aa17.11■□□□□ 0.33
RPS6KC1-202ENST00000366960 SMG6Q86US8 1419 aaKnown RBP17.11■□□□□ 0.33
RPS6KC1-202ENST00000366960 CHD1LQ86WJ1 897 aa17.11■□□□□ 0.33
RPS6KC1-202ENST00000366960 C11orf95C9JLR9 678 aaPredicted RBP17.1■□□□□ 0.33
RPS6KC1-202ENST00000366960 MCM2P49736 904 aa17.1■□□□□ 0.33
RPS6KC1-202ENST00000366960 GRPEL1Q9HAV7 217 aa17.1■□□□□ 0.33
RPS6KC1-202ENST00000366960 RRP12Q5JTH9 1297 aaKnown RBP17.1■□□□□ 0.33
RPS6KC1-202ENST00000366960 PRDM2Q13029 1718 aa17.1■□□□□ 0.33
RPS6KC1-202ENST00000366960 MCM4P33991 863 aa17.1■□□□□ 0.33
RPS6KC1-202ENST00000366960 IL1RAPL2Q9NP60 686 aa17.1■□□□□ 0.33
RPS6KC1-202ENST00000366960 PDCP20941 246 aa17.09■□□□□ 0.33
RPS6KC1-202ENST00000366960 CCDC173Q0VFZ6 552 aa17.09■□□□□ 0.33
RPS6KC1-202ENST00000366960 CDK19Q9BWU1 502 aa17.09■□□□□ 0.33
RPS6KC1-202ENST00000366960 KIAA1107Q9UPP5 1409 aa17.09■□□□□ 0.33
RPS6KC1-202ENST00000366960 WDR97A6NE52 1622 aa17.09■□□□□ 0.33
RPS6KC1-202ENST00000366960 BRPF1P55201 1214 aaPredicted RBP17.09■□□□□ 0.33
RPS6KC1-202ENST00000366960 LRRCC1Q9C099 1032 aa17.09■□□□□ 0.33
RPS6KC1-202ENST00000366960 WDR63Q8IWG1 891 aa17.08■□□□□ 0.33
RPS6KC1-202ENST00000366960 THUMPD2Q9BTF0 503 aaKnown RBP17.08■□□□□ 0.33
RPS6KC1-202ENST00000366960 RRS1Q15050 365 aaKnown RBP17.08■□□□□ 0.33
RPS6KC1-202ENST00000366960 HSP90B2PQ58FF3 399 aa17.07■□□□□ 0.32
RPS6KC1-202ENST00000366960 STK38Q15208 465 aa17.07■□□□□ 0.32
RPS6KC1-202ENST00000366960 ESCO1Q5FWF5 840 aa17.07■□□□□ 0.32
RPS6KC1-202ENST00000366960 RUFY1Q96T51 708 aa17.07■□□□□ 0.32
RPS6KC1-202ENST00000366960 CYP46A1Q9Y6A2 500 aa17.07■□□□□ 0.32
RPS6KC1-202ENST00000366960 ATF3P18847 181 aa17.07■□□□□ 0.32
RPS6KC1-202ENST00000366960 TMEM57Q8N5G2 664 aa17.07■□□□□ 0.32
RPS6KC1-202ENST00000366960 CTDP1Q9Y5B0 961 aaPredicted RBP17.06■□□□□ 0.32
RPS6KC1-202ENST00000366960 SLFN5Q08AF3 891 aa17.06■□□□□ 0.32
RPS6KC1-202ENST00000366960 RBM33Q96EV2 1170 aaKnown RBP17.06■□□□□ 0.32
RPS6KC1-202ENST00000366960 ARHGAP5Q13017 1502 aa17.06■□□□□ 0.32
RPS6KC1-202ENST00000366960 OFD1O75665 1012 aa17.05■□□□□ 0.32
RPS6KC1-202ENST00000366960 LETM1O95202 739 aaPredicted RBP17.05■□□□□ 0.32
RPS6KC1-202ENST00000366960 SRCIN1Q9C0H9 1055 aa17.05■□□□□ 0.32
RPS6KC1-202ENST00000366960 FBXO3Q9UK99 471 aa17.05■□□□□ 0.32
RPS6KC1-202ENST00000366960 PRG4Q92954 1404 aaPredicted RBP17.05■□□□□ 0.32
RPS6KC1-202ENST00000366960 PLEKHO1Q53GL0 409 aaPredicted RBP17.04■□□□□ 0.32
RPS6KC1-202ENST00000366960 TBC1D2BQ9UPU7 963 aa17.04■□□□□ 0.32
RPS6KC1-202ENST00000366960 RBM42Q9BTD8 480 aaKnown RBP17.04■□□□□ 0.32
RPS6KC1-202ENST00000366960 CWC22Q9HCG8 908 aaKnown RBP17.04■□□□□ 0.32
RPS6KC1-202ENST00000366960 HFM1A2PYH4 1435 aa17.04■□□□□ 0.32
RPS6KC1-202ENST00000366960 SRGAP3O43295 1099 aa17.04■□□□□ 0.32
RPS6KC1-202ENST00000366960 LARP1BQ659C4 914 aaKnown RBP17.04■□□□□ 0.32
RPS6KC1-202ENST00000366960 ERBINQ96RT1 1412 aa17.04■□□□□ 0.32
RPS6KC1-202ENST00000366960 BRMS1Q9HCU9 246 aa17.03■□□□□ 0.32
RPS6KC1-202ENST00000366960 EXOC6BQ9Y2D4 811 aa17.03■□□□□ 0.32
RPS6KC1-202ENST00000366960 C9orf84Q5VXU9 1444 aa17.03■□□□□ 0.32
RPS6KC1-202ENST00000366960 ME1P48163 572 aa17.03■□□□□ 0.32
RPS6KC1-202ENST00000366960 CCT4P50991 539 aaKnown RBP17.03■□□□□ 0.32
RPS6KC1-202ENST00000366960 CWC27Q6UX04 472 aaKnown RBP17.03■□□□□ 0.32
RPS6KC1-202ENST00000366960 CCDC43Q96MW1 224 aaKnown RBP17.03■□□□□ 0.32
RPS6KC1-202ENST00000366960 MIS18AQ9NYP9 233 aa17.03■□□□□ 0.32
RPS6KC1-202ENST00000366960 XBP1P17861 261 aa17.03■□□□□ 0.32
RPS6KC1-202ENST00000366960 CAGE1Q8TC20 777 aa17.03■□□□□ 0.32
RPS6KC1-202ENST00000366960 WDR33Q9C0J8 1336 aaKnown RBP17.03■□□□□ 0.32
RPS6KC1-202ENST00000366960 MYL6BP14649 208 aa17.03■□□□□ 0.32
RPS6KC1-202ENST00000366960 TNMDQ9H2S6 317 aa17.03■□□□□ 0.32
RPS6KC1-202ENST00000366960 ESPNB1AK53 854 aa17.02■□□□□ 0.32
RPS6KC1-202ENST00000366960 CCDC192P0DO97 292 aa17.02■□□□□ 0.32
RPS6KC1-202ENST00000366960 SART3Q15020 963 aaKnown RBP17.02■□□□□ 0.32
RPS6KC1-202ENST00000366960 ZNF530Q6P9A1 599 aaPredicted RBP17.01■□□□□ 0.31
RPS6KC1-202ENST00000366960 HIP1O00291 1037 aa17.01■□□□□ 0.31
RPS6KC1-202ENST00000366960 SKIDA1Q1XH10 827 aa17.01■□□□□ 0.31
RPS6KC1-202ENST00000366960 MAP7D2Q96T17 732 aa17.01■□□□□ 0.31
RPS6KC1-202ENST00000366960 FAM177A1Q8N128 213 aaPredicted RBP17.01■□□□□ 0.31
RPS6KC1-202ENST00000366960 TMPOP42166 694 aaKnown RBP17.01■□□□□ 0.31
RPS6KC1-202ENST00000366960 ERC1Q8IUD2 1116 aa17.01■□□□□ 0.31
RPS6KC1-202ENST00000366960 UPF3BQ9BZI7 483 aaKnown RBP17.01■□□□□ 0.31
RPS6KC1-202ENST00000366960 KRT85P78386 507 aa17■□□□□ 0.31
RPS6KC1-202ENST00000366960 CT47A1Q5JQC4 288 aaPredicted RBP17■□□□□ 0.31
RPS6KC1-202ENST00000366960 JAKMIP1Q96N16 626 aaKnown RBP17■□□□□ 0.31
RPS6KC1-202ENST00000366960 HMGN5P82970 282 aaKnown RBP17■□□□□ 0.31
RPS6KC1-202ENST00000366960 AACSQ86V21 672 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms