RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 HSPA2P54652 639 aa17.16■□□□□ 0.34
PRKN-205ENST00000366897 IQSEC2Q5JU85 1478 aa17.16■□□□□ 0.34
PRKN-205ENST00000366897 FSD2A1L4K1 749 aa17.16■□□□□ 0.34
PRKN-205ENST00000366897 CLTCQ00610 1675 aaKnown RBP17.15■□□□□ 0.34
PRKN-205ENST00000366897 LNPKQ9C0E8 428 aa17.15■□□□□ 0.34
PRKN-205ENST00000366897 NOB1Q9ULX3 412 aaKnown RBP17.14■□□□□ 0.33
PRKN-205ENST00000366897 HSCBQ8IWL3 235 aa17.14■□□□□ 0.33
PRKN-205ENST00000366897 CABP2Q9NPB3 220 aa17.14■□□□□ 0.33
PRKN-205ENST00000366897 TMEM57Q8N5G2 664 aa17.13■□□□□ 0.33
PRKN-205ENST00000366897 PNNQ9H307 717 aaKnown RBP17.12■□□□□ 0.33
PRKN-205ENST00000366897 GGNBP2Q9H3C7 697 aa17.12■□□□□ 0.33
PRKN-205ENST00000366897 MROH2AA6NES4 1674 aa17.12■□□□□ 0.33
PRKN-205ENST00000366897 CFAP65Q6ZU64 1925 aaKnown RBP17.12■□□□□ 0.33
PRKN-205ENST00000366897 SETD1BQ9UPS6 1966 aaKnown RBP17.11■□□□□ 0.33
PRKN-205ENST00000366897 SLC24A1O60721 1099 aa17.11■□□□□ 0.33
PRKN-205ENST00000366897 AAMPQ13685 434 aa17.11■□□□□ 0.33
PRKN-205ENST00000366897 TET3O43151 1660 aa17.1■□□□□ 0.33
PRKN-205ENST00000366897 CCDC27Q2M243 656 aa17.1■□□□□ 0.33
PRKN-205ENST00000366897 ATF7IPQ6VMQ6 1270 aa17.1■□□□□ 0.33
PRKN-205ENST00000366897 ZNF692Q9BU19 519 aaPredicted RBP17.1■□□□□ 0.33
PRKN-205ENST00000366897 PREX1Q8TCU6 1659 aa17.09■□□□□ 0.33
PRKN-205ENST00000366897 TMPOP42166 694 aaKnown RBP17.09■□□□□ 0.33
PRKN-205ENST00000366897 C1orf115Q9H7X2 142 aa17.09■□□□□ 0.33
PRKN-205ENST00000366897 TRIM35Q9UPQ4 493 aa17.09■□□□□ 0.33
PRKN-205ENST00000366897 GRPEL1Q9HAV7 217 aa17.08■□□□□ 0.33
PRKN-205ENST00000366897 FBXO31Q5XUX0 539 aaPredicted RBP17.08■□□□□ 0.32
PRKN-205ENST00000366897 DDX19BQ9UMR2 479 aa17.08■□□□□ 0.32
PRKN-205ENST00000366897 NPATQ14207 1427 aa17.08■□□□□ 0.32
PRKN-205ENST00000366897 MYOM2P54296 1465 aa17.08■□□□□ 0.32
PRKN-205ENST00000366897 ERBB4Q15303 1308 aa17.07■□□□□ 0.32
PRKN-205ENST00000366897 CD2BP2O95400 341 aaKnown RBP17.07■□□□□ 0.32
PRKN-205ENST00000366897 GAS2L3Q86XJ1 694 aa17.07■□□□□ 0.32
PRKN-205ENST00000366897 STK26Q9P289 416 aa17.07■□□□□ 0.32
PRKN-205ENST00000366897 HDAC1Q13547 482 aaPredicted RBP17.07■□□□□ 0.32
PRKN-205ENST00000366897 TNPO1Q92973 898 aaKnown RBP17.07■□□□□ 0.32
PRKN-205ENST00000366897 RBM42Q9BTD8 480 aaKnown RBP17.07■□□□□ 0.32
PRKN-205ENST00000366897 SBNO2Q9Y2G9 1366 aa17.06■□□□□ 0.32
PRKN-205ENST00000366897 KIAA1210Q9ULL0 1709 aa17.06■□□□□ 0.32
PRKN-205ENST00000366897 HSP90AB1P08238 724 aaKnown RBP17.06■□□□□ 0.32
PRKN-205ENST00000366897 MRE11P49959 708 aa17.06■□□□□ 0.32
PRKN-205ENST00000366897 SMC5Q8IY18 1101 aa17.06■□□□□ 0.32
PRKN-205ENST00000366897 C14orf93Q9H972 538 aaKnown RBP17.06■□□□□ 0.32
PRKN-205ENST00000366897 MROH1Q8NDA8 1641 aa17.06■□□□□ 0.32
PRKN-205ENST00000366897 FBLN1P23142 703 aa17.06■□□□□ 0.32
PRKN-205ENST00000366897 RIPK4P57078 832 aa17.05■□□□□ 0.32
PRKN-205ENST00000366897 ZBTB40Q9NUA8 1239 aa17.05■□□□□ 0.32
PRKN-205ENST00000366897 HSP90AA1P07900 732 aaKnown RBP17.04■□□□□ 0.32
PRKN-205ENST00000366897 CLCN1P35523 988 aa17.04■□□□□ 0.32
PRKN-205ENST00000366897 DEPDC5O75140 1603 aa17.04■□□□□ 0.32
PRKN-205ENST00000366897 PLEKHF1Q96S99 279 aa17.03■□□□□ 0.32
PRKN-205ENST00000366897 ABCC3O15438 1527 aa17.03■□□□□ 0.32
PRKN-205ENST00000366897 DDX11L8A8MPP1 907 aa17.03■□□□□ 0.32
PRKN-205ENST00000366897 ELL2O00472 640 aaPredicted RBP17.03■□□□□ 0.32
PRKN-205ENST00000366897 ANKRD45Q5TZF3 282 aa17.03■□□□□ 0.32
PRKN-205ENST00000366897 THUMPD2Q9BTF0 503 aaKnown RBP17.03■□□□□ 0.32
PRKN-205ENST00000366897 SRPK2P78362 688 aaKnown RBP17.02■□□□□ 0.32
PRKN-205ENST00000366897 KIF1BO60333 1816 aa17.02■□□□□ 0.31
PRKN-205ENST00000366897 NUCB1Q02818 461 aa17.01■□□□□ 0.31
PRKN-205ENST00000366897 CHD1LQ86WJ1 897 aa17.01■□□□□ 0.31
PRKN-205ENST00000366897 EVC2Q86UK5 1308 aa17.01■□□□□ 0.31
PRKN-205ENST00000366897 VWDEQ8N2E2 1590 aa17.01■□□□□ 0.31
PRKN-205ENST00000366897 ESPNB1AK53 854 aa17■□□□□ 0.31
PRKN-205ENST00000366897 QRICH2Q9H0J4 1663 aa17■□□□□ 0.31
PRKN-205ENST00000366897 DDIT3P35638 169 aa17■□□□□ 0.31
PRKN-205ENST00000366897 KIF2CQ99661 725 aa16.99■□□□□ 0.31
PRKN-205ENST00000366897 RBM25P49756 843 aaKnown RBP16.99■□□□□ 0.31
PRKN-205ENST00000366897 ZC3H13Q5T200 1668 aaKnown RBP16.99■□□□□ 0.31
PRKN-205ENST00000366897 NRXN1Q9ULB1 1477 aa16.99■□□□□ 0.31
PRKN-205ENST00000366897 SSFA2P28290 1259 aa16.99■□□□□ 0.31
PRKN-205ENST00000366897 ANKRD36BQ8N2N9 1353 aa16.98■□□□□ 0.31
PRKN-205ENST00000366897 TNRQ92752 1358 aa16.98■□□□□ 0.31
PRKN-205ENST00000366897 A0A1W2PP64 1363 aa16.98■□□□□ 0.31
PRKN-205ENST00000366897 MINK1Q8N4C8 1332 aaPredicted RBP16.98■□□□□ 0.31
PRKN-205ENST00000366897 EFCAB6Q5THR3 1501 aa16.97■□□□□ 0.31
PRKN-205ENST00000366897 MYO3AQ8NEV4 1616 aa16.97■□□□□ 0.31
PRKN-205ENST00000366897 TRIM44Q96DX7 344 aaPredicted RBP16.97■□□□□ 0.31
PRKN-205ENST00000366897 CT47B1P0C2W7 299 aaPredicted RBP16.96■□□□□ 0.31
PRKN-205ENST00000366897 TBC1D9Q6ZT07 1266 aa16.96■□□□□ 0.31
PRKN-205ENST00000366897 GAS2L2Q8NHY3 880 aa16.96■□□□□ 0.31
PRKN-205ENST00000366897 ADGRB1O14514 1584 aa16.96■□□□□ 0.31
PRKN-205ENST00000366897 NCOA3Q9Y6Q9 1424 aa16.96■□□□□ 0.3
PRKN-205ENST00000366897 FYB1O15117 783 aa16.95■□□□□ 0.3
PRKN-205ENST00000366897 RAB3GAP1Q15042 981 aa16.95■□□□□ 0.3
PRKN-205ENST00000366897 TSPYL6Q8N831 410 aa16.95■□□□□ 0.3
PRKN-205ENST00000366897 CAMSAP1Q5T5Y3 1602 aa16.95■□□□□ 0.3
PRKN-205ENST00000366897 IFT172Q9UG01 1749 aa16.95■□□□□ 0.3
PRKN-205ENST00000366897 IPO8O15397 1037 aaKnown RBP16.95■□□□□ 0.3
PRKN-205ENST00000366897 SNX21Q969T3 373 aa16.95■□□□□ 0.3
PRKN-205ENST00000366897 GBP4Q96PP9 640 aa16.95■□□□□ 0.3
PRKN-205ENST00000366897 CEP170BQ9Y4F5 1589 aaPredicted RBP16.95■□□□□ 0.3
PRKN-205ENST00000366897 TULP4Q9NRJ4 1543 aa16.95■□□□□ 0.3
PRKN-205ENST00000366897 KIF16BQ96L93 1317 aa16.95■□□□□ 0.3
PRKN-205ENST00000366897 HMOX1P09601 288 aa16.95■□□□□ 0.3
PRKN-205ENST00000366897 HSP90AA2PQ14568 343 aaPredicted RBP16.94■□□□□ 0.3
PRKN-205ENST00000366897 STRCQ7RTU9 1775 aa16.94■□□□□ 0.3
PRKN-205ENST00000366897 DIAPH1O60610 1272 aaKnown RBP16.94■□□□□ 0.3
PRKN-205ENST00000366897 ARHGAP31Q2M1Z3 1444 aa16.93■□□□□ 0.3
PRKN-205ENST00000366897 ADGRB2O60241 1585 aa16.93■□□□□ 0.3
PRKN-205ENST00000366897 ATAD2Q6PL18 1390 aa16.93■□□□□ 0.3
PRKN-205ENST00000366897 ADGRB3O60242 1522 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms