RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 SPIRE2Q8WWL2 714 aa5.32□□□□□ -1.56
RNU4-56P-201ENST00000364700 UNC93B1Q9H1C4 597 aa5.32□□□□□ -1.56
RNU4-56P-201ENST00000364700 GPBP1L1Q9HC44 474 aaPredicted RBP5.32□□□□□ -1.56
RNU4-56P-201ENST00000364700 LORP23490 312 aaPredicted RBP5.31□□□□□ -1.56
RNU4-56P-201ENST00000364700 SSTR3P32745 418 aaPredicted RBP5.31□□□□□ -1.56
RNU4-56P-201ENST00000364700 KCNH2Q12809 1159 aa5.31□□□□□ -1.56
RNU4-56P-201ENST00000364700 ZNF511Q8NB15 262 aa5.31□□□□□ -1.56
RNU4-56P-201ENST00000364700 BAP1Q92560 729 aa5.31□□□□□ -1.56
RNU4-56P-201ENST00000364700 ZFP42Q96MM3 310 aa5.31□□□□□ -1.56
RNU4-56P-201ENST00000364700 GJA5P36382 358 aa5.3□□□□□ -1.56
RNU4-56P-201ENST00000364700 NNTQ13423 1086 aa5.3□□□□□ -1.56
RNU4-56P-201ENST00000364700 NEUROD2Q15784 382 aa5.3□□□□□ -1.56
RNU4-56P-201ENST00000364700 PRR7Q8TB68 274 aa5.3□□□□□ -1.56
RNU4-56P-201ENST00000364700 TLL2Q9Y6L7 1015 aa5.3□□□□□ -1.56
RNU4-56P-201ENST00000364700 MTMR2Q13614 643 aa5.29□□□□□ -1.56
RNU4-56P-201ENST00000364700 SCARF1Q14162 830 aa5.29□□□□□ -1.56
RNU4-56P-201ENST00000364700 MRPL14Q6P1L8 145 aaKnown RBP5.29□□□□□ -1.56
RNU4-56P-201ENST00000364700 PARP9Q8IXQ6 854 aa5.29□□□□□ -1.56
RNU4-56P-201ENST00000364700 KDM4CQ9H3R0 1056 aa5.29□□□□□ -1.56
RNU4-56P-201ENST00000364700 ERBB4Q15303 1308 aa5.28□□□□□ -1.56
RNU4-56P-201ENST00000364700 MOXD2PA6NHM9 499 aa5.28□□□□□ -1.56
RNU4-56P-201ENST00000364700 ADH1CP00326 375 aa5.28□□□□□ -1.56
RNU4-56P-201ENST00000364700 VSIG8P0DPA2 414 aa5.28□□□□□ -1.56
RNU4-56P-201ENST00000364700 VEGFBP49765 207 aa5.28□□□□□ -1.56
RNU4-56P-201ENST00000364700 LINC01559Q495D7 138 aa5.28□□□□□ -1.56
RNU4-56P-201ENST00000364700 KLF16Q9BXK1 252 aaPredicted RBP5.28□□□□□ -1.56
RNU4-56P-201ENST00000364700 TIMP2P16035 220 aa5.27□□□□□ -1.57
RNU4-56P-201ENST00000364700 NDUFV2P19404 249 aa5.27□□□□□ -1.57
RNU4-56P-201ENST00000364700 DIXDC1Q155Q3 683 aa5.27□□□□□ -1.57
RNU4-56P-201ENST00000364700 LYPD8Q6UX82 237 aa5.27□□□□□ -1.57
RNU4-56P-201ENST00000364700 FAM174AQ8TBP5 190 aa5.27□□□□□ -1.57
RNU4-56P-201ENST00000364700 CDK15Q96Q40 435 aa5.27□□□□□ -1.57
RNU4-56P-201ENST00000364700 WDR4P57081 412 aaKnown RBP5.26□□□□□ -1.57
RNU4-56P-201ENST00000364700 TTLL12Q14166 644 aaPredicted RBP5.26□□□□□ -1.57
RNU4-56P-201ENST00000364700 PURBQ96QR8 312 aaKnown RBP5.25□□□□□ -1.57
RNU4-56P-201ENST00000364700 FAM117AQ9C073 453 aa5.25□□□□□ -1.57
RNU4-56P-201ENST00000364700 CTHP32929 405 aa5.24□□□□□ -1.57
RNU4-56P-201ENST00000364700 NR5A1Q13285 461 aa5.24□□□□□ -1.57
RNU4-56P-201ENST00000364700 RSBN1LQ6PCB5 846 aaPredicted RBP5.24□□□□□ -1.57
RNU4-56P-201ENST00000364700 GIGYF2Q6Y7W6 1299 aaKnown RBP5.24□□□□□ -1.57
RNU4-56P-201ENST00000364700 GTF3C3Q9Y5Q9 886 aa5.24□□□□□ -1.57
RNU4-56P-201ENST00000364700 ZIC2O95409 532 aaPredicted RBP5.23□□□□□ -1.57
RNU4-56P-201ENST00000364700 F12P00748 615 aaPredicted RBP5.23□□□□□ -1.57
RNU4-56P-201ENST00000364700 PRPF38BQ5VTL8 546 aaKnown RBP5.23□□□□□ -1.57
RNU4-56P-201ENST00000364700 BEGAINQ9BUH8 593 aa5.23□□□□□ -1.57
RNU4-56P-201ENST00000364700 TBC1D2Q9BYX2 928 aa5.23□□□□□ -1.57
RNU4-56P-201ENST00000364700 CFAP99D6REC4 459 aa5.22□□□□□ -1.57
RNU4-56P-201ENST00000364700 SPTLC1O15269 473 aa5.22□□□□□ -1.57
RNU4-56P-201ENST00000364700 MAN1A2O60476 641 aa5.22□□□□□ -1.57
RNU4-56P-201ENST00000364700 BPHLQ86WA6 291 aaPredicted RBP5.22□□□□□ -1.57
RNU4-56P-201ENST00000364700 FOXJ1Q92949 421 aa5.22□□□□□ -1.57
RNU4-56P-201ENST00000364700 ZBTB3Q9H5J0 574 aa5.22□□□□□ -1.57
RNU4-56P-201ENST00000364700 TIMELESSQ9UNS1 1208 aa5.22□□□□□ -1.57
RNU4-56P-201ENST00000364700 UPP2O95045 317 aa5.21□□□□□ -1.58
RNU4-56P-201ENST00000364700 HRCP23327 699 aa5.21□□□□□ -1.58
RNU4-56P-201ENST00000364700 GRM5P41594 1212 aa5.21□□□□□ -1.58
RNU4-56P-201ENST00000364700 ARID5BQ14865 1188 aa5.21□□□□□ -1.58
RNU4-56P-201ENST00000364700 ITPKCQ96DU7 683 aa5.21□□□□□ -1.58
RNU4-56P-201ENST00000364700 ZFAND3Q9H8U3 227 aa5.21□□□□□ -1.58
RNU4-56P-201ENST00000364700 SOBPA7XYQ1 873 aa5.2□□□□□ -1.58
RNU4-56P-201ENST00000364700 NR3C2P08235 984 aa5.2□□□□□ -1.58
RNU4-56P-201ENST00000364700 MEIOBQ8N635 442 aa5.2□□□□□ -1.58
RNU4-56P-201ENST00000364700 ARMC2Q8NEN0 867 aa5.2□□□□□ -1.58
RNU4-56P-201ENST00000364700 IL27Q8NEV9 243 aa5.2□□□□□ -1.58
RNU4-56P-201ENST00000364700 MAP10Q9P2G4 905 aa5.2□□□□□ -1.58
RNU4-56P-201ENST00000364700 PCDHB15Q9Y5E8 787 aa5.2□□□□□ -1.58
RNU4-56P-201ENST00000364700 LOC100996750A0A140TA64 210 aa5.19□□□□□ -1.58
RNU4-56P-201ENST00000364700 PPFIA3O75145 1194 aa5.19□□□□□ -1.58
RNU4-56P-201ENST00000364700 AGERQ15109 404 aa5.19□□□□□ -1.58
RNU4-56P-201ENST00000364700 C4orf48Q5BLP8 95 aa5.19□□□□□ -1.58
RNU4-56P-201ENST00000364700 C6orf118Q5T5N4 469 aa5.19□□□□□ -1.58
RNU4-56P-201ENST00000364700 LINC00528Q8N1L1 170 aa5.19□□□□□ -1.58
RNU4-56P-201ENST00000364700 C1QTNF2Q9BXJ5 285 aa5.19□□□□□ -1.58
RNU4-56P-201ENST00000364700 KRTAP4-6Q9BYQ5 205 aa5.19□□□□□ -1.58
RNU4-56P-201ENST00000364700 GOPCQ9HD26 462 aa5.19□□□□□ -1.58
RNU4-56P-201ENST00000364700 MAP4K5Q9Y4K4 846 aa5.19□□□□□ -1.58
RNU4-56P-201ENST00000364700 SOS2Q07890 1332 aaPredicted RBP5.19□□□□□ -1.58
RNU4-56P-201ENST00000364700 BMP2P12643 396 aa5.18□□□□□ -1.58
RNU4-56P-201ENST00000364700 KCNMA1Q12791 1236 aa5.18□□□□□ -1.58
RNU4-56P-201ENST00000364700 TUSC1Q2TAM9 212 aa5.18□□□□□ -1.58
RNU4-56P-201ENST00000364700 RIC3Q7Z5B4 369 aa5.18□□□□□ -1.58
RNU4-56P-201ENST00000364700 TRMT44Q8IYL2 757 aaKnown RBP5.18□□□□□ -1.58
RNU4-56P-201ENST00000364700 DDRGK1Q96HY6 314 aa5.18□□□□□ -1.58
RNU4-56P-201ENST00000364700 TSEN34Q9BSV6 310 aaKnown RBP5.18□□□□□ -1.58
RNU4-56P-201ENST00000364700 PER1O15534 1290 aaPredicted RBP5.17□□□□□ -1.58
RNU4-56P-201ENST00000364700 NBPF14Q5TI25 921 aa5.17□□□□□ -1.58
RNU4-56P-201ENST00000364700 SH3RF1Q7Z6J0 888 aa5.17□□□□□ -1.58
RNU4-56P-201ENST00000364700 DNMT3LQ9UJW3 386 aa5.17□□□□□ -1.58
RNU4-56P-201ENST00000364700 EMILIN1Q9Y6C2 1016 aa5.17□□□□□ -1.58
RNU4-56P-201ENST00000364700 CABLES1Q8TDN4 633 aa5.16□□□□□ -1.58
RNU4-56P-201ENST00000364700 GSK3AP49840 483 aa5.15□□□□□ -1.59
RNU4-56P-201ENST00000364700 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.15□□□□□ -1.59
RNU4-56P-201ENST00000364700 SH3D19Q5HYK7 790 aa5.15□□□□□ -1.59
RNU4-56P-201ENST00000364700 SH3BP5LQ7L8J4 393 aa5.15□□□□□ -1.59
RNU4-56P-201ENST00000364700 GPKOWQ92917 476 aaPredicted RBP eCLIP5.15□□□□□ -1.59
RNU4-56P-201ENST00000364700 NUTM2BA6NNL0 878 aaPredicted RBP5.14□□□□□ -1.59
RNU4-56P-201ENST00000364700 NUTM2EB1AL46 878 aaPredicted RBP5.14□□□□□ -1.59
RNU4-56P-201ENST00000364700 RNF225M0QZC1 329 aaPredicted RBP5.14□□□□□ -1.59
RNU4-56P-201ENST00000364700 LILRB3O75022 631 aa5.14□□□□□ -1.59
RNU4-56P-201ENST00000364700 FSHRP23945 695 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms