RNA–Protein interactions for RNA: ENST00000362058.2

CROCCP2-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 2

Gene CROCCP2, Length 2,029 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-201ENST00000362058 PLEKHF1Q96S99 279 aa31.24■■■□□ 2.59
CROCCP2-201ENST00000362058 MAPK8IP3Q9UPT6 1336 aa31.24■■■□□ 2.59
CROCCP2-201ENST00000362058 PNNQ9H307 717 aaKnown RBP31.24■■■□□ 2.59
CROCCP2-201ENST00000362058 ATP7BP35670 1465 aa31.22■■■□□ 2.59
CROCCP2-201ENST00000362058 IGHDP01880 384 aa31.22■■■□□ 2.59
CROCCP2-201ENST00000362058 CABP1Q9NZU7 370 aa31.21■■■□□ 2.59
CROCCP2-201ENST00000362058 RTL5Q5HYW3 569 aaPredicted RBP31.2■■■□□ 2.59
CROCCP2-201ENST00000362058 PMFBP1Q8TBY8 1022 aa31.2■■■□□ 2.59
CROCCP2-201ENST00000362058 TMPOP42166 694 aaKnown RBP31.2■■■□□ 2.58
CROCCP2-201ENST00000362058 PNPLA6Q8IY17 1366 aa31.19■■■□□ 2.58
CROCCP2-201ENST00000362058 DIAPH1O60610 1272 aaKnown RBP31.19■■■□□ 2.58
CROCCP2-201ENST00000362058 IL16Q14005 1332 aa31.18■■■□□ 2.58
CROCCP2-201ENST00000362058 CDC42BPGQ6DT37 1551 aa31.17■■■□□ 2.58
CROCCP2-201ENST00000362058 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.15■■■□□ 2.58
CROCCP2-201ENST00000362058 NRXN3Q9Y4C0 1643 aa31.14■■■□□ 2.58
CROCCP2-201ENST00000362058 BCL2L13Q9BXK5 485 aa31.13■■■□□ 2.57
CROCCP2-201ENST00000362058 TRIM35Q9UPQ4 493 aa31.13■■■□□ 2.57
CROCCP2-201ENST00000362058 RLBP1P12271 317 aa31.12■■■□□ 2.57
CROCCP2-201ENST00000362058 ZKSCAN2Q63HK3 967 aa31.12■■■□□ 2.57
CROCCP2-201ENST00000362058 PPM1GO15355 546 aaPredicted RBP31.12■■■□□ 2.57
CROCCP2-201ENST00000362058 MLECQ14165 292 aa31.11■■■□□ 2.57
CROCCP2-201ENST00000362058 WAPLQ7Z5K2 1190 aa31.11■■■□□ 2.57
CROCCP2-201ENST00000362058 KNDC1Q76NI1 1749 aa31.11■■■□□ 2.57
CROCCP2-201ENST00000362058 MAP2P11137 1827 aaKnown RBP31.1■■■□□ 2.57
CROCCP2-201ENST00000362058 DEKP35659 375 aaKnown RBP31.1■■■□□ 2.57
CROCCP2-201ENST00000362058 FCHSD2O94868 740 aa31.08■■■□□ 2.57
CROCCP2-201ENST00000362058 TSR2Q969E8 191 aaKnown RBP31.08■■■□□ 2.57
CROCCP2-201ENST00000362058 ESF1Q9H501 851 aaKnown RBP31.08■■■□□ 2.57
CROCCP2-201ENST00000362058 KIF13AQ9H1H9 1805 aa31.07■■■□□ 2.56
CROCCP2-201ENST00000362058 RIPK4P57078 832 aa31.07■■■□□ 2.56
CROCCP2-201ENST00000362058 MVPQ14764 893 aaKnown RBP31.07■■■□□ 2.56
CROCCP2-201ENST00000362058 DAXXQ9UER7 740 aaPredicted RBP31.07■■■□□ 2.56
CROCCP2-201ENST00000362058 ZMYM3Q14202 1370 aa31.07■■■□□ 2.56
CROCCP2-201ENST00000362058 EXOSC9Q06265 439 aaKnown RBP31.07■■■□□ 2.56
CROCCP2-201ENST00000362058 RWDD1Q9H446 243 aaPredicted RBP31.07■■■□□ 2.56
CROCCP2-201ENST00000362058 USP35Q9P2H5 1018 aa31.07■■■□□ 2.56
CROCCP2-201ENST00000362058 HDGFP51858 240 aaKnown RBP31.06■■■□□ 2.56
CROCCP2-201ENST00000362058 FTSJ3Q8IY81 847 aaKnown RBP31.06■■■□□ 2.56
CROCCP2-201ENST00000362058 DZIP1LQ8IYY4 767 aaKnown RBP31.06■■■□□ 2.56
CROCCP2-201ENST00000362058 TNNQ9UQP3 1299 aa31.06■■■□□ 2.56
CROCCP2-201ENST00000362058 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.05■■■□□ 2.56
CROCCP2-201ENST00000362058 PCDHB15Q9Y5E8 787 aa31.05■■■□□ 2.56
CROCCP2-201ENST00000362058 EDC4Q6P2E9 1401 aaKnown RBP31.05■■■□□ 2.56
CROCCP2-201ENST00000362058 LRRC7Q96NW7 1537 aa31.05■■■□□ 2.56
CROCCP2-201ENST00000362058 NEFMP07197 916 aa31.05■■■□□ 2.56
CROCCP2-201ENST00000362058 WASLO00401 505 aaPredicted RBP31.04■■■□□ 2.56
CROCCP2-201ENST00000362058 CPSF1Q10570 1443 aaKnown RBP31.04■■■□□ 2.56
CROCCP2-201ENST00000362058 SMC4Q9NTJ3 1288 aa31.04■■■□□ 2.56
CROCCP2-201ENST00000362058 LAS1LQ9Y4W2 734 aaKnown RBP31.03■■■□□ 2.56
CROCCP2-201ENST00000362058 SIRT1Q96EB6 747 aa31.02■■■□□ 2.56
CROCCP2-201ENST00000362058 POLKQ9UBT6 870 aa31.02■■■□□ 2.56
CROCCP2-201ENST00000362058 FAM135BQ49AJ0 1406 aa31.02■■■□□ 2.56
CROCCP2-201ENST00000362058 PPIP5K1Q6PFW1 1433 aa31.02■■■□□ 2.56
CROCCP2-201ENST00000362058 METP08581 1390 aa31■■■□□ 2.55
CROCCP2-201ENST00000362058 TECPR2O15040 1411 aa31■■■□□ 2.55
CROCCP2-201ENST00000362058 MON2Q7Z3U7 1717 aa30.99■■■□□ 2.55
CROCCP2-201ENST00000362058 CPS1P31327 1500 aa30.98■■■□□ 2.55
CROCCP2-201ENST00000362058 SSH1Q8WYL5 1049 aa30.98■■■□□ 2.55
CROCCP2-201ENST00000362058 RSPH6AQ9H0K4 717 aa30.98■■■□□ 2.55
CROCCP2-201ENST00000362058 ITSN1Q15811 1721 aa30.97■■■□□ 2.55
CROCCP2-201ENST00000362058 AKAP12Q02952 1782 aa30.96■■■□□ 2.55
CROCCP2-201ENST00000362058 CDK12Q9NYV4 1490 aaPredicted RBP30.96■■■□□ 2.55
CROCCP2-201ENST00000362058 PRKAR2BP31323 418 aa30.95■■■□□ 2.55
CROCCP2-201ENST00000362058 ATF7IPQ6VMQ6 1270 aa30.95■■■□□ 2.55
CROCCP2-201ENST00000362058 DDX19BQ9UMR2 479 aa30.95■■■□□ 2.55
CROCCP2-201ENST00000362058 AATKQ6ZMQ8 1374 aa30.95■■■□□ 2.55
CROCCP2-201ENST00000362058 KIF16BQ96L93 1317 aa30.95■■■□□ 2.54
CROCCP2-201ENST00000362058 TRIM27P14373 513 aa30.94■■■□□ 2.54
CROCCP2-201ENST00000362058 PDZRN3Q9UPQ7 1066 aa30.94■■■□□ 2.54
CROCCP2-201ENST00000362058 TNRQ92752 1358 aa30.94■■■□□ 2.54
CROCCP2-201ENST00000362058 IPO8O15397 1037 aaKnown RBP30.93■■■□□ 2.54
CROCCP2-201ENST00000362058 ALDH1L2Q3SY69 923 aa30.93■■■□□ 2.54
CROCCP2-201ENST00000362058 TXNDC2Q86VQ3 553 aa30.93■■■□□ 2.54
CROCCP2-201ENST00000362058 UBR1Q8IWV7 1749 aa30.92■■■□□ 2.54
CROCCP2-201ENST00000362058 CALD1Q05682 793 aaKnown RBP30.92■■■□□ 2.54
CROCCP2-201ENST00000362058 NUDT16Q96DE0 195 aaKnown RBP30.92■■■□□ 2.54
CROCCP2-201ENST00000362058 ZNF428Q96B54 188 aa30.91■■■□□ 2.54
CROCCP2-201ENST00000362058 CCDC61Q9Y6R9 512 aa30.91■■■□□ 2.54
CROCCP2-201ENST00000362058 NFE2L2Q16236 605 aa30.9■■■□□ 2.54
CROCCP2-201ENST00000362058 NOB1Q9ULX3 412 aaKnown RBP30.9■■■□□ 2.54
CROCCP2-201ENST00000362058 C3P01024 1663 aa30.89■■■□□ 2.54
CROCCP2-201ENST00000362058 NME9Q86XW9 330 aa30.88■■■□□ 2.53
CROCCP2-201ENST00000362058 ITPRIPQ8IWB1 547 aa30.88■■■□□ 2.53
CROCCP2-201ENST00000362058 COG3Q96JB2 828 aa30.88■■■□□ 2.53
CROCCP2-201ENST00000362058 HDAC1Q13547 482 aaPredicted RBP30.87■■■□□ 2.53
CROCCP2-201ENST00000362058 TMEM2Q9UHN6 1383 aa30.87■■■□□ 2.53
CROCCP2-201ENST00000362058 FBLN1P23142 703 aa30.86■■■□□ 2.53
CROCCP2-201ENST00000362058 SLC4A3P48751 1232 aa30.86■■■□□ 2.53
CROCCP2-201ENST00000362058 ZNF692Q9BU19 519 aaPredicted RBP30.86■■■□□ 2.53
CROCCP2-201ENST00000362058 IL13P35225 146 aa30.86■■■□□ 2.53
CROCCP2-201ENST00000362058 EMILIN1Q9Y6C2 1016 aa30.86■■■□□ 2.53
CROCCP2-201ENST00000362058 USP19O94966 1318 aa30.86■■■□□ 2.53
CROCCP2-201ENST00000362058 BRPF1P55201 1214 aaPredicted RBP30.84■■■□□ 2.53
CROCCP2-201ENST00000362058 BCL11AQ9H165 835 aa30.83■■■□□ 2.53
CROCCP2-201ENST00000362058 HMOX1P09601 288 aa30.83■■■□□ 2.53
CROCCP2-201ENST00000362058 UPF2Q9HAU5 1272 aaKnown RBP30.83■■■□□ 2.53
CROCCP2-201ENST00000362058 DLG5Q8TDM6 1919 aa30.82■■■□□ 2.52
CROCCP2-201ENST00000362058 TMEM57Q8N5G2 664 aa30.81■■■□□ 2.52
CROCCP2-201ENST00000362058 PHACTR3Q96KR7 559 aa30.81■■■□□ 2.52
CROCCP2-201ENST00000362058 GNAI1P63096 354 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms