RNA–Protein interactions for RNA: ENST00000361587.3

HIPK1-202, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best)

Gene HIPK1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-202ENST00000361587 ZNHIT6Q9NWK9 470 aaKnown RBP12.65□□□□□ -0.38
HIPK1-202ENST00000361587 FYCO1Q9BQS8 1478 aa12.65□□□□□ -0.38
HIPK1-202ENST00000361587 FGD6Q6ZV73 1430 aa12.64□□□□□ -0.39
HIPK1-202ENST00000361587 CCDC27Q2M243 656 aa12.64□□□□□ -0.39
HIPK1-202ENST00000361587 CT47B1P0C2W7 299 aaPredicted RBP12.64□□□□□ -0.39
HIPK1-202ENST00000361587 SYCP1Q15431 976 aa12.64□□□□□ -0.39
HIPK1-202ENST00000361587 CCAR1Q8IX12 1150 aaKnown RBP12.64□□□□□ -0.39
HIPK1-202ENST00000361587 CCDC192P0DO97 292 aa12.63□□□□□ -0.39
HIPK1-202ENST00000361587 PDIA4P13667 645 aaKnown RBP12.63□□□□□ -0.39
HIPK1-202ENST00000361587 STK38Q15208 465 aa12.63□□□□□ -0.39
HIPK1-202ENST00000361587 RNF214Q8ND24 703 aa12.63□□□□□ -0.39
HIPK1-202ENST00000361587 SYTL4Q96C24 671 aaPredicted RBP12.63□□□□□ -0.39
HIPK1-202ENST00000361587 ANKRD18AQ8IVF6 992 aa12.63□□□□□ -0.39
HIPK1-202ENST00000361587 GOLGA6L10A6NI86 522 aa12.62□□□□□ -0.39
HIPK1-202ENST00000361587 CBFA2T2O43439 604 aa12.62□□□□□ -0.39
HIPK1-202ENST00000361587 NEK4P51957 841 aa12.62□□□□□ -0.39
HIPK1-202ENST00000361587 ERLIN1O75477 346 aa12.62□□□□□ -0.39
HIPK1-202ENST00000361587 HMOX1P09601 288 aa12.62□□□□□ -0.39
HIPK1-202ENST00000361587 STIM1Q13586 685 aa12.62□□□□□ -0.39
HIPK1-202ENST00000361587 WDR33Q9C0J8 1336 aaKnown RBP12.62□□□□□ -0.39
HIPK1-202ENST00000361587 SURF6O75683 361 aaKnown RBP12.62□□□□□ -0.39
HIPK1-202ENST00000361587 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.61□□□□□ -0.392e-6■■■□□ 16.1
HIPK1-202ENST00000361587 GOLGA6L7A0A1B0GV03 622 aa12.61□□□□□ -0.39
HIPK1-202ENST00000361587 GNAI2P04899 355 aa12.61□□□□□ -0.39
HIPK1-202ENST00000361587 SMG6Q86US8 1419 aaKnown RBP12.61□□□□□ -0.39
HIPK1-202ENST00000361587 PRPF40AO75400 957 aaKnown RBP12.61□□□□□ -0.39
HIPK1-202ENST00000361587 EIF3JO75822 258 aaKnown RBP12.61□□□□□ -0.39
HIPK1-202ENST00000361587 WWC2Q6AWC2 1192 aa12.61□□□□□ -0.39
HIPK1-202ENST00000361587 AXDND1Q5T1B0 1012 aaPredicted RBP12.6□□□□□ -0.39
HIPK1-202ENST00000361587 TSPYL1Q9H0U9 437 aa12.6□□□□□ -0.39
HIPK1-202ENST00000361587 AIMP1Q12904 312 aaKnown RBP12.6□□□□□ -0.39
HIPK1-202ENST00000361587 IQCEQ6IPM2 695 aa12.6□□□□□ -0.39
HIPK1-202ENST00000361587 PDZRN3Q9UPQ7 1066 aa12.6□□□□□ -0.39
HIPK1-202ENST00000361587 CYP46A1Q9Y6A2 500 aa12.6□□□□□ -0.39
HIPK1-202ENST00000361587 KIF6Q6ZMV9 814 aa12.6□□□□□ -0.39
HIPK1-202ENST00000361587 PPFIBP1Q86W92 1011 aa12.6□□□□□ -0.39
HIPK1-202ENST00000361587 FYB1O15117 783 aa12.6□□□□□ -0.39
HIPK1-202ENST00000361587 CCT4P50991 539 aaKnown RBP12.6□□□□□ -0.39
HIPK1-202ENST00000361587 PLEKHO1Q53GL0 409 aaPredicted RBP12.6□□□□□ -0.39
HIPK1-202ENST00000361587 CCDC158Q5M9N0 1113 aa12.59□□□□□ -0.39
HIPK1-202ENST00000361587 GNL3LQ9NVN8 582 aaKnown RBP12.59□□□□□ -0.39
HIPK1-202ENST00000361587 SRCIN1Q9C0H9 1055 aa12.59□□□□□ -0.39
HIPK1-202ENST00000361587 KIAA0754O94854 1291 aa12.59□□□□□ -0.39
HIPK1-202ENST00000361587 TTLL5Q6EMB2 1281 aa12.59□□□□□ -0.39
HIPK1-202ENST00000361587 TRIM22Q8IYM9 498 aa12.59□□□□□ -0.39
HIPK1-202ENST00000361587 PNISRQ8TF01 805 aaKnown RBP12.59□□□□□ -0.39
HIPK1-202ENST00000361587 ANKRD50Q9ULJ7 1429 aa12.59□□□□□ -0.39
HIPK1-202ENST00000361587 SERPINC1P01008 464 aa12.59□□□□□ -0.39
HIPK1-202ENST00000361587 KRT18P05783 430 aaKnown RBP12.59□□□□□ -0.39
HIPK1-202ENST00000361587 CIZ1Q9ULV3 898 aaPredicted RBP12.59□□□□□ -0.39
HIPK1-202ENST00000361587 FANCD2Q9BXW9 1451 aa12.59□□□□□ -0.39
HIPK1-202ENST00000361587 ATF3P18847 181 aa12.58□□□□□ -0.39
HIPK1-202ENST00000361587 TCP11L2Q8N4U5 519 aa12.58□□□□□ -0.39
HIPK1-202ENST00000361587 DNAJC2Q99543 621 aaKnown RBP12.58□□□□□ -0.39
HIPK1-202ENST00000361587 GGNBP2Q9H3C7 697 aa12.58□□□□□ -0.39
HIPK1-202ENST00000361587 FBXO3Q9UK99 471 aa12.58□□□□□ -0.39
HIPK1-202ENST00000361587 IKQ13123 557 aaPredicted RBP12.58□□□□□ -0.4
HIPK1-202ENST00000361587 KRT85P78386 507 aa12.58□□□□□ -0.4
HIPK1-202ENST00000361587 CCDC112Q8NEF3 446 aa12.58□□□□□ -0.4
HIPK1-202ENST00000361587 ADAMTS8Q9UP79 889 aa12.58□□□□□ -0.4
HIPK1-202ENST00000361587 GPRASP1Q5JY77 1395 aa12.58□□□□□ -0.4
HIPK1-202ENST00000361587 TNMDQ9H2S6 317 aa12.58□□□□□ -0.4
HIPK1-202ENST00000361587 K7ELQ4 463 aaPredicted RBP12.58□□□□□ -0.4
HIPK1-202ENST00000361587 TTC39AQ5SRH9 613 aa12.58□□□□□ -0.4
HIPK1-202ENST00000361587 NLRP2Q9NX02 1062 aa12.58□□□□□ -0.4
HIPK1-202ENST00000361587 FIBPO43427 364 aa12.57□□□□□ -0.4
HIPK1-202ENST00000361587 TWISTNBQ3B726 338 aaPredicted RBP12.57□□□□□ -0.4
HIPK1-202ENST00000361587 ZSCAN25Q6NSZ9 544 aa12.57□□□□□ -0.4
HIPK1-202ENST00000361587 NACAP1Q9BZK3 213 aa12.57□□□□□ -0.4
HIPK1-202ENST00000361587 CCDC181Q5TID7 509 aa12.57□□□□□ -0.4
HIPK1-202ENST00000361587 MEX3CQ5U5Q3 659 aaKnown RBP12.57□□□□□ -0.4
HIPK1-202ENST00000361587 ZSCAN31Q96LW9 406 aaPredicted RBP12.57□□□□□ -0.4
HIPK1-202ENST00000361587 NCAPD3P42695 1498 aa12.57□□□□□ -0.4
HIPK1-202ENST00000361587 CDKL5O76039 1030 aa12.57□□□□□ -0.4
HIPK1-202ENST00000361587 MTHFSP49914 203 aa12.57□□□□□ -0.4
HIPK1-202ENST00000361587 NOL7Q9UMY1 257 aaKnown RBP12.57□□□□□ -0.4
HIPK1-202ENST00000361587 PPP2R1AP30153 589 aa12.56□□□□□ -0.4
HIPK1-202ENST00000361587 USP8P40818 1118 aa12.56□□□□□ -0.4
HIPK1-202ENST00000361587 LRRCC1Q9C099 1032 aa12.56□□□□□ -0.4
HIPK1-202ENST00000361587 DEF6Q9H4E7 631 aa12.56□□□□□ -0.4
HIPK1-202ENST00000361587 HFM1A2PYH4 1435 aa12.55□□□□□ -0.4
HIPK1-202ENST00000361587 TMEM132AQ24JP5 1023 aa12.55□□□□□ -0.4
HIPK1-202ENST00000361587 WDR63Q8IWG1 891 aa12.55□□□□□ -0.4
HIPK1-202ENST00000361587 FMNL2Q96PY5 1086 aa12.55□□□□□ -0.4
HIPK1-202ENST00000361587 EXOSC9Q06265 439 aaKnown RBP12.55□□□□□ -0.4
HIPK1-202ENST00000361587 SEPT7Q16181 437 aaKnown RBP12.55□□□□□ -0.4
HIPK1-202ENST00000361587 NEFHP12036 1026 aa12.55□□□□□ -0.4
HIPK1-202ENST00000361587 BRPF1P55201 1214 aaPredicted RBP12.55□□□□□ -0.4
HIPK1-202ENST00000361587 CABP2Q9NPB3 220 aa12.55□□□□□ -0.4
HIPK1-202ENST00000361587 CCDC57Q2TAC2 916 aa12.54□□□□□ -0.4
HIPK1-202ENST00000361587 NLRP6P59044 892 aa12.54□□□□□ -0.4
HIPK1-202ENST00000361587 CFAP45Q9UL16 551 aa12.54□□□□□ -0.4
HIPK1-202ENST00000361587 LRRC9Q6ZRR7 1453 aa12.54□□□□□ -0.4
HIPK1-202ENST00000361587 GRPEL1Q9HAV7 217 aa12.54□□□□□ -0.4
HIPK1-202ENST00000361587 KRT32Q14532 448 aa12.54□□□□□ -0.4
HIPK1-202ENST00000361587 SAMD1Q6SPF0 538 aaPredicted RBP12.54□□□□□ -0.4
HIPK1-202ENST00000361587 CEP57L1Q8IYX8 460 aa12.54□□□□□ -0.4
HIPK1-202ENST00000361587 CCDC69A6NI79 296 aa12.53□□□□□ -0.4
HIPK1-202ENST00000361587 PRKAR2BP31323 418 aa12.53□□□□□ -0.4
HIPK1-202ENST00000361587 SMTNL1A8MU46 457 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms