RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 ILDR1Q86SU0 546 aaPredicted RBP19.11■□□□□ 0.65
NSMCE1-201ENST00000361439 XPCQ01831 940 aaPredicted RBP19.1■□□□□ 0.65
NSMCE1-201ENST00000361439 POLR3GLQ9BT43 218 aa19.1■□□□□ 0.65
NSMCE1-201ENST00000361439 AKAP12Q02952 1782 aa19.1■□□□□ 0.65
NSMCE1-201ENST00000361439 MYOM1P52179 1685 aa19.1■□□□□ 0.65
NSMCE1-201ENST00000361439 TRPM3Q9HCF6 1732 aaPredicted RBP19.08■□□□□ 0.65
NSMCE1-201ENST00000361439 TTC21BQ7Z4L5 1316 aa19.08■□□□□ 0.65
NSMCE1-201ENST00000361439 PAK3O75914 559 aaPredicted RBP19.07■□□□□ 0.64
NSMCE1-201ENST00000361439 MON2Q7Z3U7 1717 aa19.07■□□□□ 0.64
NSMCE1-201ENST00000361439 PNPLA6Q8IY17 1366 aa19.06■□□□□ 0.64
NSMCE1-201ENST00000361439 SPATA31A6Q5VVP1 1343 aa19.06■□□□□ 0.64
NSMCE1-201ENST00000361439 SHPRHQ149N8 1683 aa19.05■□□□□ 0.64
NSMCE1-201ENST00000361439 PANK3Q9H999 370 aa19.05■□□□□ 0.64
NSMCE1-201ENST00000361439 NRKQ7Z2Y5 1582 aa19.05■□□□□ 0.64
NSMCE1-201ENST00000361439 ALS2Q96Q42 1657 aa19.05■□□□□ 0.64
NSMCE1-201ENST00000361439 ABTB2Q8N961 1025 aa19.04■□□□□ 0.64
NSMCE1-201ENST00000361439 COL22A1Q8NFW1 1626 aaPredicted RBP19.03■□□□□ 0.64
NSMCE1-201ENST00000361439 NLRP13Q86W25 1043 aa19.03■□□□□ 0.64
NSMCE1-201ENST00000361439 ZNF316A6NFI3 1004 aaPredicted RBP19.02■□□□□ 0.64
NSMCE1-201ENST00000361439 LMOD2Q6P5Q4 547 aa19.02■□□□□ 0.64
NSMCE1-201ENST00000361439 CARD14Q9BXL6 1004 aa19.02■□□□□ 0.64
NSMCE1-201ENST00000361439 USP31Q70CQ4 1352 aa19.02■□□□□ 0.64
NSMCE1-201ENST00000361439 MED1Q15648 1581 aaPredicted RBP19.02■□□□□ 0.63
NSMCE1-201ENST00000361439 CGNL1Q0VF96 1302 aa19■□□□□ 0.63
NSMCE1-201ENST00000361439 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19■□□□□ 0.63
NSMCE1-201ENST00000361439 NSD3Q9BZ95 1437 aa19■□□□□ 0.63
NSMCE1-201ENST00000361439 USP19O94966 1318 aa19■□□□□ 0.63
NSMCE1-201ENST00000361439 NLRP6P59044 892 aa18.99■□□□□ 0.63
NSMCE1-201ENST00000361439 KNSTRNQ9Y448 316 aa18.99■□□□□ 0.63
NSMCE1-201ENST00000361439 PER1O15534 1290 aaPredicted RBP18.98■□□□□ 0.63
NSMCE1-201ENST00000361439 NSD2O96028 1365 aa18.97■□□□□ 0.63
NSMCE1-201ENST00000361439 FYB1O15117 783 aa18.97■□□□□ 0.63
NSMCE1-201ENST00000361439 PIK3C2AO00443 1686 aa18.97■□□□□ 0.63
NSMCE1-201ENST00000361439 USP54Q70EL1 1684 aa18.96■□□□□ 0.63
NSMCE1-201ENST00000361439 KCNH5Q8NCM2 988 aa18.96■□□□□ 0.63
NSMCE1-201ENST00000361439 NME9Q86XW9 330 aa18.95■□□□□ 0.62
NSMCE1-201ENST00000361439 COG3Q96JB2 828 aa18.95■□□□□ 0.62
NSMCE1-201ENST00000361439 NPC1L1Q9UHC9 1359 aa18.94■□□□□ 0.62
NSMCE1-201ENST00000361439 OVOS2A0A0J9YW53 1432 aa18.94■□□□□ 0.62
NSMCE1-201ENST00000361439 OVOS2Q6IE36 1432 aa18.94■□□□□ 0.62
NSMCE1-201ENST00000361439 GCP02774 474 aa18.93■□□□□ 0.62
NSMCE1-201ENST00000361439 HAP1P54257 671 aaPredicted RBP18.93■□□□□ 0.62
NSMCE1-201ENST00000361439 NUTM2GQ5VZR2 741 aa18.93■□□□□ 0.62
NSMCE1-201ENST00000361439 SLIT3O75094 1523 aa18.93■□□□□ 0.62
NSMCE1-201ENST00000361439 AMER1Q5JTC6 1135 aaPredicted RBP18.92■□□□□ 0.62
NSMCE1-201ENST00000361439 CABLES1Q8TDN4 633 aa18.91■□□□□ 0.62
NSMCE1-201ENST00000361439 CPDO75976 1380 aa18.91■□□□□ 0.62
NSMCE1-201ENST00000361439 CRYBG1Q9Y4K1 1723 aa18.91■□□□□ 0.62
NSMCE1-201ENST00000361439 NUTM2BA6NNL0 878 aaPredicted RBP18.9■□□□□ 0.62
NSMCE1-201ENST00000361439 NUTM2EB1AL46 878 aaPredicted RBP18.9■□□□□ 0.62
NSMCE1-201ENST00000361439 NUTM2AQ8IVF1 878 aaPredicted RBP18.9■□□□□ 0.62
NSMCE1-201ENST00000361439 DDX10Q13206 875 aaKnown RBP18.89■□□□□ 0.61
NSMCE1-201ENST00000361439 GGNBP2Q9H3C7 697 aa18.89■□□□□ 0.61
NSMCE1-201ENST00000361439 ABCA3Q99758 1704 aa18.88■□□□□ 0.61
NSMCE1-201ENST00000361439 KIF20BQ96Q89 1820 aa18.88■□□□□ 0.61
NSMCE1-201ENST00000361439 ZRANB1Q9UGI0 708 aa18.88■□□□□ 0.61
NSMCE1-201ENST00000361439 LRP6O75581 1613 aa18.88■□□□□ 0.61
NSMCE1-201ENST00000361439 PHRF1Q9P1Y6 1649 aaKnown RBP18.88■□□□□ 0.61
NSMCE1-201ENST00000361439 MARF1Q9Y4F3 1742 aaKnown RBP18.87■□□□□ 0.61
NSMCE1-201ENST00000361439 MEX3CQ5U5Q3 659 aaKnown RBP18.86■□□□□ 0.61
NSMCE1-201ENST00000361439 NFAT5O94916 1531 aa18.85■□□□□ 0.61
NSMCE1-201ENST00000361439 AATKQ6ZMQ8 1374 aa18.85■□□□□ 0.61
NSMCE1-201ENST00000361439 ADAMTS2O95450 1211 aa18.85■□□□□ 0.61
NSMCE1-201ENST00000361439 ARHGEF25Q86VW2 580 aa18.85■□□□□ 0.61
NSMCE1-201ENST00000361439 MORC1Q86VD1 984 aa18.84■□□□□ 0.61
NSMCE1-201ENST00000361439 PRDM11Q9NQV5 511 aa18.84■□□□□ 0.61
NSMCE1-201ENST00000361439 ABCC6O95255 1503 aa18.84■□□□□ 0.61
NSMCE1-201ENST00000361439 ANKRD26Q9UPS8 1709 aa18.83■□□□□ 0.61
NSMCE1-201ENST00000361439 KIF24Q5T7B8 1368 aa18.83■□□□□ 0.61
NSMCE1-201ENST00000361439 KIAA0232Q92628 1395 aa18.83■□□□□ 0.61
NSMCE1-201ENST00000361439 ZC3H6P61129 1189 aaKnown RBP18.83■□□□□ 0.6
NSMCE1-201ENST00000361439 FNBP4Q8N3X1 1017 aaPredicted RBP18.83■□□□□ 0.6
NSMCE1-201ENST00000361439 FAM83GA6ND36 823 aa18.82■□□□□ 0.6
NSMCE1-201ENST00000361439 PLEKHG5O94827 1062 aa18.82■□□□□ 0.6
NSMCE1-201ENST00000361439 NGLY1Q96IV0 654 aa18.82■□□□□ 0.6
NSMCE1-201ENST00000361439 C8orf37Q96NL8 207 aa18.81■□□□□ 0.6
NSMCE1-201ENST00000361439 COL14A1Q05707 1796 aaKnown RBP18.81■□□□□ 0.6
NSMCE1-201ENST00000361439 SLIT2O94813 1529 aa18.8■□□□□ 0.6
NSMCE1-201ENST00000361439 CC2D1BQ5T0F9 858 aaKnown RBP18.8■□□□□ 0.6
NSMCE1-201ENST00000361439 RTL1A6NKG5 1358 aa18.8■□□□□ 0.6
NSMCE1-201ENST00000361439 SOX12O15370 315 aa18.78■□□□□ 0.6
NSMCE1-201ENST00000361439 ZNF772Q68DY9 489 aaPredicted RBP18.78■□□□□ 0.6
NSMCE1-201ENST00000361439 IP6K1Q92551 441 aa18.77■□□□□ 0.6
NSMCE1-201ENST00000361439 AFF2P51816 1311 aa18.76■□□□□ 0.59
NSMCE1-201ENST00000361439 MAP3K19Q56UN5 1328 aa18.76■□□□□ 0.59
NSMCE1-201ENST00000361439 BLMP54132 1417 aaPredicted RBP18.76■□□□□ 0.59
NSMCE1-201ENST00000361439 RALBP1Q15311 655 aa18.76■□□□□ 0.59
NSMCE1-201ENST00000361439 UNC5CLQ8IV45 518 aa18.76■□□□□ 0.59
NSMCE1-201ENST00000361439 BTG4Q9NY30 223 aa18.76■□□□□ 0.59
NSMCE1-201ENST00000361439 NWD2Q9ULI1 1742 aa18.76■□□□□ 0.59
NSMCE1-201ENST00000361439 AMPHP49418 695 aa18.75■□□□□ 0.59
NSMCE1-201ENST00000361439 RRS1Q15050 365 aaKnown RBP18.75■□□□□ 0.59
NSMCE1-201ENST00000361439 CHRNA2Q15822 529 aa18.75■□□□□ 0.59
NSMCE1-201ENST00000361439 POLKQ9UBT6 870 aa18.75■□□□□ 0.59
NSMCE1-201ENST00000361439 FLT4P35916 1363 aa18.75■□□□□ 0.59
NSMCE1-201ENST00000361439 BCL9LQ86UU0 1499 aa18.75■□□□□ 0.59
NSMCE1-201ENST00000361439 LMO7Q8WWI1 1683 aa18.75■□□□□ 0.59
NSMCE1-201ENST00000361439 SMG6Q86US8 1419 aaKnown RBP18.74■□□□□ 0.59
NSMCE1-201ENST00000361439 PARD3Q8TEW0 1356 aa18.74■□□□□ 0.59
NSMCE1-201ENST00000361439 PHF23Q9BUL5 403 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms