RNA–Protein interactions for RNA: ENST00000360831.9

NLE1-201, Transcript of notchless homolog 1, humanhuman

TSL 5 BASIC

Gene NLE1, Length 1,726 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-201ENST00000360831 C1orf167Q5SNV9 1468 aa23.87■■□□□ 1.41
NLE1-201ENST00000360831 FMN2Q9NZ56 1722 aa23.85■■□□□ 1.41
NLE1-201ENST00000360831 EVC2Q86UK5 1308 aa23.85■■□□□ 1.41
NLE1-201ENST00000360831 SRPK2P78362 688 aaKnown RBP23.84■■□□□ 1.41
NLE1-201ENST00000360831 PUS7Q96PZ0 661 aaKnown RBP23.84■■□□□ 1.41
NLE1-201ENST00000360831 DUSP27Q5VZP5 1158 aa23.83■■□□□ 1.41
NLE1-201ENST00000360831 ESCO1Q5FWF5 840 aa23.82■■□□□ 1.4
NLE1-201ENST00000360831 BRINP3Q76B58 766 aa23.82■■□□□ 1.4
NLE1-201ENST00000360831 ORAI2Q96SN7 254 aa23.82■■□□□ 1.4
NLE1-201ENST00000360831 TULP4Q9NRJ4 1543 aa23.82■■□□□ 1.4
NLE1-201ENST00000360831 GOLGA2Q08379 1002 aa23.81■■□□□ 1.4
NLE1-201ENST00000360831 NGEFQ8N5V2 710 aa23.81■■□□□ 1.4
NLE1-201ENST00000360831 ANKARQ7Z5J8 1434 aa23.81■■□□□ 1.4
NLE1-201ENST00000360831 CABP2Q9NPB3 220 aa23.81■■□□□ 1.4
NLE1-201ENST00000360831 TRMT2AQ8IZ69 625 aaKnown RBP23.8■■□□□ 1.4
NLE1-201ENST00000360831 NUDT16Q96DE0 195 aaKnown RBP23.8■■□□□ 1.4
NLE1-201ENST00000360831 ROBO1Q9Y6N7 1651 aa23.8■■□□□ 1.4
NLE1-201ENST00000360831 PRR36Q9H6K5 1346 aa23.8■■□□□ 1.4
NLE1-201ENST00000360831 POLR3AO14802 1390 aaPredicted RBP23.8■■□□□ 1.4
NLE1-201ENST00000360831 SLFN5Q08AF3 891 aa23.79■■□□□ 1.4
NLE1-201ENST00000360831 TCERG1O14776 1098 aaKnown RBP23.78■■□□□ 1.4
NLE1-201ENST00000360831 USP32Q8NFA0 1604 aa23.77■■□□□ 1.4
NLE1-201ENST00000360831 CRBNQ96SW2 442 aa23.77■■□□□ 1.4
NLE1-201ENST00000360831 PLIN1O60240 522 aa23.76■■□□□ 1.39
NLE1-201ENST00000360831 ATP7BP35670 1465 aa23.76■■□□□ 1.39
NLE1-201ENST00000360831 CCDC61Q9Y6R9 512 aa23.76■■□□□ 1.39
NLE1-201ENST00000360831 NSD3Q9BZ95 1437 aa23.75■■□□□ 1.39
NLE1-201ENST00000360831 RGPD8O14715 1765 aaPredicted RBP23.75■■□□□ 1.39
NLE1-201ENST00000360831 PHF8Q9UPP1 1060 aa23.75■■□□□ 1.39
NLE1-201ENST00000360831 MS4A1P11836 297 aa23.73■■□□□ 1.39
NLE1-201ENST00000360831 CCDC146Q8IYE0 955 aa23.73■■□□□ 1.39
NLE1-201ENST00000360831 PMFBP1Q8TBY8 1022 aa23.73■■□□□ 1.39
NLE1-201ENST00000360831 APAF1O14727 1248 aa23.72■■□□□ 1.39
NLE1-201ENST00000360831 FOXO3O43524 673 aa23.72■■□□□ 1.39
NLE1-201ENST00000360831 ERICH6Q7L0X2 663 aa23.72■■□□□ 1.39
NLE1-201ENST00000360831 DDX17Q92841 729 aaKnown RBP23.72■■□□□ 1.39
NLE1-201ENST00000360831 SLC12A5Q9H2X9 1139 aa23.72■■□□□ 1.39
NLE1-201ENST00000360831 MORC1Q86VD1 984 aa23.71■■□□□ 1.39
NLE1-201ENST00000360831 ATAD2Q6PL18 1390 aa23.71■■□□□ 1.39
NLE1-201ENST00000360831 HSPA1LP34931 641 aa23.7■■□□□ 1.39
NLE1-201ENST00000360831 ILDR1Q86SU0 546 aaPredicted RBP23.7■■□□□ 1.39
NLE1-201ENST00000360831 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.7■■□□□ 1.38
NLE1-201ENST00000360831 PPIP5K1Q6PFW1 1433 aa23.69■■□□□ 1.38
NLE1-201ENST00000360831 NPHP3Q7Z494 1330 aa23.68■■□□□ 1.38
NLE1-201ENST00000360831 ITSN1Q15811 1721 aa23.68■■□□□ 1.38
NLE1-201ENST00000360831 E9PSI1 815 aa23.68■■□□□ 1.38
NLE1-201ENST00000360831 CABP1Q9NZU7 370 aa23.68■■□□□ 1.38
NLE1-201ENST00000360831 KIF1AQ12756 1690 aa23.68■■□□□ 1.38
NLE1-201ENST00000360831 PLEKHG3A1L390 1219 aa23.67■■□□□ 1.38
NLE1-201ENST00000360831 NGDNQ8NEJ9 315 aaKnown RBP23.67■■□□□ 1.38
NLE1-201ENST00000360831 TOPAZ1Q8N9V7 1692 aa23.67■■□□□ 1.38
NLE1-201ENST00000360831 AHDC1Q5TGY3 1603 aaPredicted RBP23.67■■□□□ 1.38
NLE1-201ENST00000360831 C20orf194Q5TEA3 1177 aa23.66■■□□□ 1.38
NLE1-201ENST00000360831 NSD2O96028 1365 aa23.66■■□□□ 1.38
NLE1-201ENST00000360831 ANKRD36BQ8N2N9 1353 aa23.65■■□□□ 1.38
NLE1-201ENST00000360831 XPCQ01831 940 aaPredicted RBP23.65■■□□□ 1.38
NLE1-201ENST00000360831 NHSL1Q5SYE7 1610 aa23.65■■□□□ 1.38
NLE1-201ENST00000360831 CGNL1Q0VF96 1302 aa23.65■■□□□ 1.38
NLE1-201ENST00000360831 PSME1Q06323 249 aa23.64■■□□□ 1.38
NLE1-201ENST00000360831 ACEP12821 1306 aa23.64■■□□□ 1.38
NLE1-201ENST00000360831 SHPRHQ149N8 1683 aa23.64■■□□□ 1.38
NLE1-201ENST00000360831 PHLPP1O60346 1717 aa23.64■■□□□ 1.37
NLE1-201ENST00000360831 ANP32AP39687 249 aaKnown RBP23.63■■□□□ 1.37
NLE1-201ENST00000360831 SPINK5Q9NQ38 1064 aaPredicted RBP23.63■■□□□ 1.37
NLE1-201ENST00000360831 SOS2Q07890 1332 aaPredicted RBP23.63■■□□□ 1.37
NLE1-201ENST00000360831 KRT28Q7Z3Y7 464 aa23.62■■□□□ 1.37
NLE1-201ENST00000360831 NINLQ9Y2I6 1382 aa23.62■■□□□ 1.37
NLE1-201ENST00000360831 NOP58Q9Y2X3 529 aaKnown RBP23.62■■□□□ 1.37
NLE1-201ENST00000360831 KDM2BQ8NHM5 1336 aa23.61■■□□□ 1.37
NLE1-201ENST00000360831 PXDNQ92626 1479 aa23.6■■□□□ 1.37
NLE1-201ENST00000360831 COL16A1Q07092 1604 aaPredicted RBP23.6■■□□□ 1.37
NLE1-201ENST00000360831 PDE4AP27815 886 aa23.59■■□□□ 1.37
NLE1-201ENST00000360831 LRRC59Q96AG4 307 aaKnown RBP23.59■■□□□ 1.37
NLE1-201ENST00000360831 RUNDC1Q96C34 613 aa23.59■■□□□ 1.37
NLE1-201ENST00000360831 IPO9Q96P70 1041 aaKnown RBP23.59■■□□□ 1.37
NLE1-201ENST00000360831 NCBP3Q53F19 620 aaKnown RBP23.59■■□□□ 1.37
NLE1-201ENST00000360831 CFAP53Q96M91 514 aa23.58■■□□□ 1.37
NLE1-201ENST00000360831 BACH2Q9BYV9 841 aa23.58■■□□□ 1.37
NLE1-201ENST00000360831 CENPQQ7L2Z9 268 aaPredicted RBP23.57■■□□□ 1.36
NLE1-201ENST00000360831 WWC1Q8IX03 1113 aa23.57■■□□□ 1.36
NLE1-201ENST00000360831 ZNF692Q9BU19 519 aaPredicted RBP23.56■■□□□ 1.36
NLE1-201ENST00000360831 PHF23Q9BUL5 403 aaPredicted RBP23.56■■□□□ 1.36
NLE1-201ENST00000360831 MTHFSP49914 203 aa23.55■■□□□ 1.36
NLE1-201ENST00000360831 TERF2IPQ9NYB0 399 aa23.55■■□□□ 1.36
NLE1-201ENST00000360831 PAK3O75914 559 aaPredicted RBP23.54■■□□□ 1.36
NLE1-201ENST00000360831 HDGFL2Q7Z4V5 671 aaPredicted RBP23.54■■□□□ 1.36
NLE1-201ENST00000360831 CPSF1Q10570 1443 aaKnown RBP23.54■■□□□ 1.36
NLE1-201ENST00000360831 SBNO1A3KN83 1393 aa23.54■■□□□ 1.36
NLE1-201ENST00000360831 SPATA31A3Q5VYP0 1347 aa23.53■■□□□ 1.36
NLE1-201ENST00000360831 TNNT2P45379 298 aaPredicted RBP23.53■■□□□ 1.36
NLE1-201ENST00000360831 CD163L1Q9NR16 1453 aa23.52■■□□□ 1.36
NLE1-201ENST00000360831 USP6P35125 1406 aa23.52■■□□□ 1.36
NLE1-201ENST00000360831 JCADQ9P266 1359 aa23.52■■□□□ 1.36
NLE1-201ENST00000360831 CCDC27Q2M243 656 aa23.52■■□□□ 1.36
NLE1-201ENST00000360831 WDR63Q8IWG1 891 aa23.52■■□□□ 1.36
NLE1-201ENST00000360831 LMOD2Q6P5Q4 547 aa23.51■■□□□ 1.35
NLE1-201ENST00000360831 A0A1W2PP64 1363 aa23.51■■□□□ 1.35
NLE1-201ENST00000360831 TNS3Q68CZ2 1445 aa23.5■■□□□ 1.35
NLE1-201ENST00000360831 TCP11L2Q8N4U5 519 aa23.5■■□□□ 1.35
NLE1-201ENST00000360831 BCAR3O75815 825 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms