RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 MED14O60244 1454 aa11.93□□□□□ -0.5
GTF3C2-202ENST00000359541 PPM1GO15355 546 aaPredicted RBP11.93□□□□□ -0.5
GTF3C2-202ENST00000359541 RARSP54136 660 aaKnown RBP11.93□□□□□ -0.5
GTF3C2-202ENST00000359541 PTPRMP28827 1452 aa11.93□□□□□ -0.5
GTF3C2-202ENST00000359541 CALD1Q05682 793 aaKnown RBP11.92□□□□□ -0.5
GTF3C2-202ENST00000359541 CABP1Q9NZU7 370 aa11.92□□□□□ -0.5
GTF3C2-202ENST00000359541 IQSEC2Q5JU85 1478 aa11.92□□□□□ -0.5
GTF3C2-202ENST00000359541 ALKQ9UM73 1620 aa11.92□□□□□ -0.5
GTF3C2-202ENST00000359541 FYB1O15117 783 aa11.92□□□□□ -0.5
GTF3C2-202ENST00000359541 TPRNQ4KMQ1 711 aa11.92□□□□□ -0.5
GTF3C2-202ENST00000359541 ZKSCAN2Q63HK3 967 aa11.92□□□□□ -0.5
GTF3C2-202ENST00000359541 PAK3O75914 559 aaPredicted RBP11.91□□□□□ -0.5
GTF3C2-202ENST00000359541 RWDD1Q9H446 243 aaPredicted RBP11.91□□□□□ -0.5
GTF3C2-202ENST00000359541 DMRT2Q9Y5R5 561 aa11.91□□□□□ -0.5
GTF3C2-202ENST00000359541 PANK1Q8TE04 598 aa11.91□□□□□ -0.5
GTF3C2-202ENST00000359541 UPF2Q9HAU5 1272 aaKnown RBP11.9□□□□□ -0.5
GTF3C2-202ENST00000359541 IL16Q14005 1332 aa11.9□□□□□ -0.5
GTF3C2-202ENST00000359541 SHPRHQ149N8 1683 aa11.9□□□□□ -0.5
GTF3C2-202ENST00000359541 TMPOP42166 694 aaKnown RBP11.9□□□□□ -0.5
GTF3C2-202ENST00000359541 SMC4Q9NTJ3 1288 aa11.9□□□□□ -0.5
GTF3C2-202ENST00000359541 DLC1Q96QB1 1528 aa11.9□□□□□ -0.51
GTF3C2-202ENST00000359541 IPO8O15397 1037 aaKnown RBP11.89□□□□□ -0.51
GTF3C2-202ENST00000359541 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.89□□□□□ -0.51
GTF3C2-202ENST00000359541 A2ML1A8K2U0 1454 aa11.89□□□□□ -0.51
GTF3C2-202ENST00000359541 RIPK4P57078 832 aa11.89□□□□□ -0.51
GTF3C2-202ENST00000359541 ATP7BP35670 1465 aa11.89□□□□□ -0.51
GTF3C2-202ENST00000359541 FCHSD2O94868 740 aa11.88□□□□□ -0.51
GTF3C2-202ENST00000359541 CHMP4BQ9H444 224 aaKnown RBP11.88□□□□□ -0.51
GTF3C2-202ENST00000359541 DZIP1LQ8IYY4 767 aaKnown RBP11.88□□□□□ -0.51
GTF3C2-202ENST00000359541 SPATA31D1Q6ZQQ2 1576 aa11.88□□□□□ -0.51
GTF3C2-202ENST00000359541 TSPOAP1O95153 1857 aa11.88□□□□□ -0.51
GTF3C2-202ENST00000359541 BCL2L13Q9BXK5 485 aa11.87□□□□□ -0.51
GTF3C2-202ENST00000359541 PODXL2Q9NZ53 605 aa11.87□□□□□ -0.51
GTF3C2-202ENST00000359541 CLTCQ00610 1675 aaKnown RBP11.87□□□□□ -0.51
GTF3C2-202ENST00000359541 KIF16BQ96L93 1317 aa11.87□□□□□ -0.51
GTF3C2-202ENST00000359541 ARHGEF40Q8TER5 1519 aa11.87□□□□□ -0.51
GTF3C2-202ENST00000359541 MYO5BQ9ULV0 1848 aa11.87□□□□□ -0.51
GTF3C2-202ENST00000359541 WASLO00401 505 aaPredicted RBP11.86□□□□□ -0.51
GTF3C2-202ENST00000359541 LMOD3Q0VAK6 560 aa11.86□□□□□ -0.51
GTF3C2-202ENST00000359541 COG3Q96JB2 828 aa11.86□□□□□ -0.51
GTF3C2-202ENST00000359541 USP35Q9P2H5 1018 aa11.86□□□□□ -0.51
GTF3C2-202ENST00000359541 WAPLQ7Z5K2 1190 aa11.86□□□□□ -0.51
GTF3C2-202ENST00000359541 DDX19BQ9UMR2 479 aa11.86□□□□□ -0.51
GTF3C2-202ENST00000359541 EXOSC9Q06265 439 aaKnown RBP11.85□□□□□ -0.51
GTF3C2-202ENST00000359541 MVPQ14764 893 aaKnown RBP11.85□□□□□ -0.51
GTF3C2-202ENST00000359541 ZNF428Q96B54 188 aa11.85□□□□□ -0.51
GTF3C2-202ENST00000359541 ZMYM3Q14202 1370 aa11.85□□□□□ -0.51
GTF3C2-202ENST00000359541 TNRQ92752 1358 aa11.85□□□□□ -0.51
GTF3C2-202ENST00000359541 SIRT1Q96EB6 747 aa11.85□□□□□ -0.51
GTF3C2-202ENST00000359541 ZNF692Q9BU19 519 aaPredicted RBP11.85□□□□□ -0.51
GTF3C2-202ENST00000359541 EDC4Q6P2E9 1401 aaKnown RBP11.84□□□□□ -0.51
GTF3C2-202ENST00000359541 SKAP1Q86WV1 359 aa11.84□□□□□ -0.51
GTF3C2-202ENST00000359541 CCDC61Q9Y6R9 512 aa11.84□□□□□ -0.51
GTF3C2-202ENST00000359541 ADGRB2O60241 1585 aa11.84□□□□□ -0.51
GTF3C2-202ENST00000359541 BECN1Q14457 450 aa11.84□□□□□ -0.51
GTF3C2-202ENST00000359541 TSR2Q969E8 191 aaKnown RBP11.84□□□□□ -0.51
GTF3C2-202ENST00000359541 PLEKHF1Q96S99 279 aa11.84□□□□□ -0.51
GTF3C2-202ENST00000359541 PPIP5K1Q6PFW1 1433 aa11.83□□□□□ -0.52
GTF3C2-202ENST00000359541 ITPRIPQ8IWB1 547 aa11.83□□□□□ -0.52
GTF3C2-202ENST00000359541 IGHDP01880 384 aa11.83□□□□□ -0.52
GTF3C2-202ENST00000359541 PRKAR2BP31323 418 aa11.83□□□□□ -0.52
GTF3C2-202ENST00000359541 ANKRD26Q9UPS8 1709 aa11.83□□□□□ -0.52
GTF3C2-202ENST00000359541 C8orf34Q49A92 452 aa11.83□□□□□ -0.52
GTF3C2-202ENST00000359541 TXNDC2Q86VQ3 553 aa11.83□□□□□ -0.52
GTF3C2-202ENST00000359541 NUDT16Q96DE0 195 aaKnown RBP11.83□□□□□ -0.52
GTF3C2-202ENST00000359541 LAS1LQ9Y4W2 734 aaKnown RBP11.83□□□□□ -0.52
GTF3C2-202ENST00000359541 PNPLA6Q8IY17 1366 aa11.83□□□□□ -0.52
GTF3C2-202ENST00000359541 FAM135BQ49AJ0 1406 aa11.82□□□□□ -0.52
GTF3C2-202ENST00000359541 HAP1P54257 671 aaPredicted RBP11.82□□□□□ -0.52
GTF3C2-202ENST00000359541 ATF7IPQ6VMQ6 1270 aa11.82□□□□□ -0.52
GTF3C2-202ENST00000359541 EID1Q9Y6B2 187 aa11.82□□□□□ -0.52
GTF3C2-202ENST00000359541 CD163L1Q9NR16 1453 aa11.82□□□□□ -0.52
GTF3C2-202ENST00000359541 DEKP35659 375 aaKnown RBP11.82□□□□□ -0.52
GTF3C2-202ENST00000359541 ALDH1L2Q3SY69 923 aa11.82□□□□□ -0.52
GTF3C2-202ENST00000359541 GNAI1P63096 354 aa11.81□□□□□ -0.52
GTF3C2-202ENST00000359541 COL3A1P02461 1466 aaPredicted RBP11.81□□□□□ -0.52
GTF3C2-202ENST00000359541 NFE2L2Q16236 605 aa11.81□□□□□ -0.52
GTF3C2-202ENST00000359541 POLKQ9UBT6 870 aa11.81□□□□□ -0.52
GTF3C2-202ENST00000359541 TRIM35Q9UPQ4 493 aa11.81□□□□□ -0.52
GTF3C2-202ENST00000359541 NLRP1Q9C000 1473 aa11.8□□□□□ -0.52
GTF3C2-202ENST00000359541 SSH1Q8WYL5 1049 aa11.79□□□□□ -0.52
GTF3C2-202ENST00000359541 KIF20BQ96Q89 1820 aa11.79□□□□□ -0.52
GTF3C2-202ENST00000359541 RLBP1P12271 317 aa11.79□□□□□ -0.52
GTF3C2-202ENST00000359541 AATKQ6ZMQ8 1374 aa11.79□□□□□ -0.52
GTF3C2-202ENST00000359541 RSPH6AQ9H0K4 717 aa11.78□□□□□ -0.52
GTF3C2-202ENST00000359541 PDZRN3Q9UPQ7 1066 aa11.78□□□□□ -0.52
GTF3C2-202ENST00000359541 HMOX1P09601 288 aa11.78□□□□□ -0.52
GTF3C2-202ENST00000359541 TMEM2Q9UHN6 1383 aa11.78□□□□□ -0.52
GTF3C2-202ENST00000359541 METP08581 1390 aa11.78□□□□□ -0.52
GTF3C2-202ENST00000359541 NME9Q86XW9 330 aa11.78□□□□□ -0.52
GTF3C2-202ENST00000359541 NOB1Q9ULX3 412 aaKnown RBP11.78□□□□□ -0.52
GTF3C2-202ENST00000359541 PCDHB15Q9Y5E8 787 aa11.78□□□□□ -0.52
GTF3C2-202ENST00000359541 TRIM27P14373 513 aa11.77□□□□□ -0.52
GTF3C2-202ENST00000359541 IFT57Q9NWB7 429 aa11.77□□□□□ -0.52
GTF3C2-202ENST00000359541 CDK12Q9NYV4 1490 aaPredicted RBP11.77□□□□□ -0.53
GTF3C2-202ENST00000359541 TECPR2O15040 1411 aa11.77□□□□□ -0.53
GTF3C2-202ENST00000359541 CPSF1Q10570 1443 aaKnown RBP11.77□□□□□ -0.53
GTF3C2-202ENST00000359541 EMILIN1Q9Y6C2 1016 aa11.77□□□□□ -0.53
GTF3C2-202ENST00000359541 VIRMAQ69YN4 1812 aaKnown RBP11.76□□□□□ -0.53
GTF3C2-202ENST00000359541 HDAC1Q13547 482 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms