RNA–Protein interactions for RNA: ENST00000359353.9

DDX42-201, Transcript of DEAD-box helicase 42, humanhuman

TSL 5 BASIC

Gene DDX42, Length 2,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-201ENST00000359353 C1orf115Q9H7X2 142 aa30.37■■■□□ 2.45
DDX42-201ENST00000359353 USP32Q8NFA0 1604 aa30.37■■■□□ 2.45
DDX42-201ENST00000359353 HDAC1Q13547 482 aaPredicted RBP30.37■■■□□ 2.45
DDX42-201ENST00000359353 LMTK2Q8IWU2 1503 aa30.36■■■□□ 2.45
DDX42-201ENST00000359353 L1TD1Q5T7N2 865 aaKnown RBP30.36■■■□□ 2.45
DDX42-201ENST00000359353 ARHGEF28Q8N1W1 1705 aaKnown RBP30.36■■■□□ 2.45
DDX42-201ENST00000359353 FYB1O15117 783 aa30.36■■■□□ 2.45
DDX42-201ENST00000359353 GOLGA6L3A6NEY3 463 aa30.35■■■□□ 2.45
DDX42-201ENST00000359353 THUMPD2Q9BTF0 503 aaKnown RBP30.34■■■□□ 2.45
DDX42-201ENST00000359353 FOXD4L1Q9NU39 408 aa30.34■■■□□ 2.45
DDX42-201ENST00000359353 CHMP5Q9NZZ3 219 aa30.34■■■□□ 2.45
DDX42-201ENST00000359353 VGFO15240 615 aaPredicted RBP30.34■■■□□ 2.45
DDX42-201ENST00000359353 RAPGEF3O95398 923 aa30.34■■■□□ 2.45
DDX42-201ENST00000359353 ZBTB40Q9NUA8 1239 aa30.34■■■□□ 2.45
DDX42-201ENST00000359353 CAMSAP1Q5T5Y3 1602 aa30.34■■■□□ 2.45
DDX42-201ENST00000359353 ZMYM3Q14202 1370 aa30.33■■■□□ 2.45
DDX42-201ENST00000359353 TRAK2O60296 914 aa30.33■■■□□ 2.45
DDX42-201ENST00000359353 HSCBQ8IWL3 235 aa30.33■■■□□ 2.45
DDX42-201ENST00000359353 SMC5Q8IY18 1101 aa30.33■■■□□ 2.45
DDX42-201ENST00000359353 FRMPD1Q5SYB0 1578 aa30.32■■■□□ 2.44
DDX42-201ENST00000359353 ELL2O00472 640 aaPredicted RBP30.32■■■□□ 2.44
DDX42-201ENST00000359353 IDI1Q13907 227 aa30.32■■■□□ 2.44
DDX42-201ENST00000359353 NSD2O96028 1365 aa30.31■■■□□ 2.44
DDX42-201ENST00000359353 RPGRIP1LQ68CZ1 1315 aa30.31■■■□□ 2.44
DDX42-201ENST00000359353 SIGLEC1Q9BZZ2 1709 aa30.31■■■□□ 2.44
DDX42-201ENST00000359353 PRAM1Q96QH2 718 aa30.3■■■□□ 2.44
DDX42-201ENST00000359353 ABCC11Q96J66 1382 aa30.3■■■□□ 2.44
DDX42-201ENST00000359353 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.29■■■□□ 2.449e-8■□□□□ 10.5
DDX42-201ENST00000359353 DIAPH1O60610 1272 aaKnown RBP30.28■■■□□ 2.44
DDX42-201ENST00000359353 CT47B1P0C2W7 299 aaPredicted RBP30.28■■■□□ 2.44
DDX42-201ENST00000359353 HMOX1P09601 288 aa30.27■■■□□ 2.44
DDX42-201ENST00000359353 COL3A1P02461 1466 aaPredicted RBP30.26■■■□□ 2.43
DDX42-201ENST00000359353 ZNF692Q9BU19 519 aaPredicted RBP30.26■■■□□ 2.43
DDX42-201ENST00000359353 ABCC3O15438 1527 aa30.25■■■□□ 2.43
DDX42-201ENST00000359353 PRKAR2BP31323 418 aa30.25■■■□□ 2.43
DDX42-201ENST00000359353 ANKRD45Q5TZF3 282 aa30.25■■■□□ 2.43
DDX42-201ENST00000359353 FSD2A1L4K1 749 aa30.24■■■□□ 2.43
DDX42-201ENST00000359353 NUCB1Q02818 461 aa30.24■■■□□ 2.43
DDX42-201ENST00000359353 CHD1LQ86WJ1 897 aa30.23■■■□□ 2.43
DDX42-201ENST00000359353 NEXMIFQ5QGS0 1516 aa30.23■■■□□ 2.43
DDX42-201ENST00000359353 CABP1Q9NZU7 370 aa30.22■■■□□ 2.43
DDX42-201ENST00000359353 CD2BP2O95400 341 aaKnown RBP30.22■■■□□ 2.43
DDX42-201ENST00000359353 TSPYL6Q8N831 410 aa30.22■■■□□ 2.43
DDX42-201ENST00000359353 KIF16BQ96L93 1317 aa30.21■■■□□ 2.43
DDX42-201ENST00000359353 RBM42Q9BTD8 480 aaKnown RBP30.21■■■□□ 2.43
DDX42-201ENST00000359353 POGZQ7Z3K3 1410 aa30.21■■■□□ 2.43
DDX42-201ENST00000359353 TERF2IPQ9NYB0 399 aa30.21■■■□□ 2.43
DDX42-201ENST00000359353 HECW2Q9P2P5 1572 aa30.21■■■□□ 2.43
DDX42-201ENST00000359353 IPO8O15397 1037 aaKnown RBP30.2■■■□□ 2.43
DDX42-201ENST00000359353 PHACTR3Q96KR7 559 aa30.2■■■□□ 2.43
DDX42-201ENST00000359353 RSPH6AQ9H0K4 717 aa30.2■■■□□ 2.43
DDX42-201ENST00000359353 HSP90AB1P08238 724 aaKnown RBP30.19■■■□□ 2.42
DDX42-201ENST00000359353 NPM1P06748 294 aaKnown RBP eCLIP30.19■■■□□ 2.42
DDX42-201ENST00000359353 NCBP3Q53F19 620 aaKnown RBP30.19■■■□□ 2.42
DDX42-201ENST00000359353 PUS7Q96PZ0 661 aaKnown RBP30.18■■■□□ 2.42
DDX42-201ENST00000359353 TNPO1Q92973 898 aaKnown RBP30.17■■■□□ 2.42
DDX42-201ENST00000359353 CDK19Q9BWU1 502 aa30.16■■■□□ 2.42
DDX42-201ENST00000359353 CD163L1Q9NR16 1453 aa30.16■■■□□ 2.42
DDX42-201ENST00000359353 MYO5BQ9ULV0 1848 aa30.15■■■□□ 2.42
DDX42-201ENST00000359353 IL16Q14005 1332 aa30.15■■■□□ 2.42
DDX42-201ENST00000359353 HSP90AA1P07900 732 aaKnown RBP30.14■■■□□ 2.42
DDX42-201ENST00000359353 RBM25P49756 843 aaKnown RBP30.14■■■□□ 2.42
DDX42-201ENST00000359353 PPIP5K1Q6PFW1 1433 aa30.13■■■□□ 2.41
DDX42-201ENST00000359353 HDGFL2Q7Z4V5 671 aaPredicted RBP30.13■■■□□ 2.41
DDX42-201ENST00000359353 KIF2CQ99661 725 aa30.13■■■□□ 2.41
DDX42-201ENST00000359353 LRRC7Q96NW7 1537 aa30.12■■■□□ 2.41
DDX42-201ENST00000359353 ZBTB7BO15156 539 aaPredicted RBP30.12■■■□□ 2.41
DDX42-201ENST00000359353 ATAD2Q6PL18 1390 aa30.12■■■□□ 2.41
DDX42-201ENST00000359353 SIRT2Q8IXJ6 389 aa30.1■■■□□ 2.41
DDX42-201ENST00000359353 MLH3Q9UHC1 1453 aa30.1■■■□□ 2.41
DDX42-201ENST00000359353 DDIT3P35638 169 aa30.1■■■□□ 2.41
DDX42-201ENST00000359353 TBC1D9Q6ZT07 1266 aa30.1■■■□□ 2.41
DDX42-201ENST00000359353 GRPEL1Q9HAV7 217 aa30.1■■■□□ 2.41
DDX42-201ENST00000359353 EMILIN1Q9Y6C2 1016 aa30.1■■■□□ 2.41
DDX42-201ENST00000359353 ALDH1L2Q3SY69 923 aa30.09■■■□□ 2.41
DDX42-201ENST00000359353 FBXO31Q5XUX0 539 aaPredicted RBP30.09■■■□□ 2.41
DDX42-201ENST00000359353 POLKQ9UBT6 870 aa30.09■■■□□ 2.41
DDX42-201ENST00000359353 DDX11L8A8MPP1 907 aa30.09■■■□□ 2.41
DDX42-201ENST00000359353 VAMP4O75379 141 aa30.09■■■□□ 2.41
DDX42-201ENST00000359353 WAPLQ7Z5K2 1190 aa30.09■■■□□ 2.41
DDX42-201ENST00000359353 GAS2L3Q86XJ1 694 aa30.09■■■□□ 2.41
DDX42-201ENST00000359353 PTPRMP28827 1452 aa30.09■■■□□ 2.41
DDX42-201ENST00000359353 ZRANB1Q9UGI0 708 aa30.08■■■□□ 2.41
DDX42-201ENST00000359353 PIK3C2BO00750 1634 aa30.08■■■□□ 2.41
DDX42-201ENST00000359353 BMP2KLQ5H9B9 411 aa30.08■■■□□ 2.41
DDX42-201ENST00000359353 NAP1L5Q96NT1 182 aaPredicted RBP30.08■■■□□ 2.41
DDX42-201ENST00000359353 FCHSD2O94868 740 aa30.07■■■□□ 2.4
DDX42-201ENST00000359353 MRPL50Q8N5N7 158 aaKnown RBP30.07■■■□□ 2.4
DDX42-201ENST00000359353 AK9Q5TCS8 1911 aa30.07■■■□□ 2.4
DDX42-201ENST00000359353 NCOA3Q9Y6Q9 1424 aa30.06■■■□□ 2.4
DDX42-201ENST00000359353 FAM83GA6ND36 823 aa30.06■■■□□ 2.4
DDX42-201ENST00000359353 MRE11P49959 708 aa30.06■■■□□ 2.4
DDX42-201ENST00000359353 DCTN1Q14203 1278 aa30.05■■■□□ 2.4
DDX42-201ENST00000359353 SNX21Q969T3 373 aa30.05■■■□□ 2.4
DDX42-201ENST00000359353 MBIPQ9NS73 344 aa30.04■■■□□ 2.4
DDX42-201ENST00000359353 YTHDC2Q9H6S0 1430 aaKnown RBP30.04■■■□□ 2.4
DDX42-201ENST00000359353 PNPLA6Q8IY17 1366 aa30.03■■■□□ 2.4
DDX42-201ENST00000359353 SSFA2P28290 1259 aa30.02■■■□□ 2.4
DDX42-201ENST00000359353 PNNQ9H307 717 aaKnown RBP30.02■■■□□ 2.4
DDX42-201ENST00000359353 NFE2L2Q16236 605 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms