RNA–Protein interactions for RNA: ENST00000359276.8

CTPS2-201, Transcript of CTP synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-201ENST00000359276 SRPK2P78362 688 aaKnown RBP20.17■□□□□ 0.82
CTPS2-201ENST00000359276 THUMPD2Q9BTF0 503 aaKnown RBP20.17■□□□□ 0.82
CTPS2-201ENST00000359276 GDPD2Q9HCC8 539 aa20.17■□□□□ 0.82
CTPS2-201ENST00000359276 LMBRD1Q9NUN5 540 aa20.17■□□□□ 0.82
CTPS2-201ENST00000359276 ADGRF5Q8IZF2 1346 aa20.17■□□□□ 0.82
CTPS2-201ENST00000359276 C17orf53Q8N3J3 647 aaPredicted RBP20.16■□□□□ 0.82
CTPS2-201ENST00000359276 CCDC141Q6ZP82 1450 aa20.16■□□□□ 0.82
CTPS2-201ENST00000359276 ITSN2Q9NZM3 1697 aa20.16■□□□□ 0.82
CTPS2-201ENST00000359276 POLR3AO14802 1390 aaPredicted RBP20.16■□□□□ 0.82
CTPS2-201ENST00000359276 KIF2CQ99661 725 aa20.16■□□□□ 0.82
CTPS2-201ENST00000359276 PRDM4Q9UKN5 801 aa20.16■□□□□ 0.82
CTPS2-201ENST00000359276 DDIT3P35638 169 aa20.15■□□□□ 0.82
CTPS2-201ENST00000359276 PRDM15P57071 1507 aaPredicted RBP20.15■□□□□ 0.82
CTPS2-201ENST00000359276 NEK4P51957 841 aa20.15■□□□□ 0.82
CTPS2-201ENST00000359276 ZNF445P59923 1031 aa20.15■□□□□ 0.82
CTPS2-201ENST00000359276 C16orf71Q8IYS4 520 aaPredicted RBP20.14■□□□□ 0.82
CTPS2-201ENST00000359276 CABP2Q9NPB3 220 aa20.14■□□□□ 0.82
CTPS2-201ENST00000359276 KIAA0556O60303 1618 aa20.14■□□□□ 0.81
CTPS2-201ENST00000359276 AFAP1Q8N556 730 aa20.14■□□□□ 0.81
CTPS2-201ENST00000359276 GCC1Q96CN9 775 aa20.14■□□□□ 0.81
CTPS2-201ENST00000359276 TMEM63CQ9P1W3 806 aa20.13■□□□□ 0.81
CTPS2-201ENST00000359276 CHMP4BQ9H444 224 aaKnown RBP20.13■□□□□ 0.81
CTPS2-201ENST00000359276 PTPRGP23470 1445 aa20.13■□□□□ 0.81
CTPS2-201ENST00000359276 ZNF500O60304 480 aaPredicted RBP20.13■□□□□ 0.81
CTPS2-201ENST00000359276 TSPY26PQ9H489 355 aa20.13■□□□□ 0.81
CTPS2-201ENST00000359276 EIF4G3O43432 1585 aaKnown RBP20.12■□□□□ 0.81
CTPS2-201ENST00000359276 ABCC2Q92887 1545 aa20.12■□□□□ 0.81
CTPS2-201ENST00000359276 SMAP1Q8IYB5 467 aaPredicted RBP20.12■□□□□ 0.81
CTPS2-201ENST00000359276 CHAF1AQ13111 956 aaPredicted RBP20.12■□□□□ 0.81
CTPS2-201ENST00000359276 PPP4R3BQ5MIZ7 849 aa20.12■□□□□ 0.81
CTPS2-201ENST00000359276 GPT2Q8TD30 523 aa20.12■□□□□ 0.81
CTPS2-201ENST00000359276 LRSAM1Q6UWE0 723 aa20.12■□□□□ 0.81
CTPS2-201ENST00000359276 TTC12Q9H892 705 aaPredicted RBP20.12■□□□□ 0.81
CTPS2-201ENST00000359276 HMOX1P09601 288 aa20.11■□□□□ 0.81
CTPS2-201ENST00000359276 HS1BP3Q53T59 392 aa20.11■□□□□ 0.81
CTPS2-201ENST00000359276 USP25Q9UHP3 1055 aa20.11■□□□□ 0.81
CTPS2-201ENST00000359276 TERF1P54274 439 aa20.11■□□□□ 0.81
CTPS2-201ENST00000359276 INTS3Q68E01 1043 aaKnown RBP20.11■□□□□ 0.81
CTPS2-201ENST00000359276 SYAP1Q96A49 352 aaPredicted RBP20.11■□□□□ 0.81
CTPS2-201ENST00000359276 NSFL1CQ9UNZ2 370 aaKnown RBP20.11■□□□□ 0.81
CTPS2-201ENST00000359276 RTEL1-TNFRSF6BF6WH68 1400 aa20.11■□□□□ 0.81
CTPS2-201ENST00000359276 SMARCA5O60264 1052 aaPredicted RBP20.1■□□□□ 0.81
CTPS2-201ENST00000359276 SPAG9O60271 1321 aaKnown RBP20.1■□□□□ 0.81
CTPS2-201ENST00000359276 ZMYM3Q14202 1370 aa20.1■□□□□ 0.81
CTPS2-201ENST00000359276 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.1■□□□□ 0.81
CTPS2-201ENST00000359276 NPC1L1Q9UHC9 1359 aa20.1■□□□□ 0.81
CTPS2-201ENST00000359276 NUP160Q12769 1436 aa20.1■□□□□ 0.81
CTPS2-201ENST00000359276 CT47B1P0C2W7 299 aaPredicted RBP20.09■□□□□ 0.81
CTPS2-201ENST00000359276 CCDC94Q9BW85 323 aaPredicted RBP20.09■□□□□ 0.81
CTPS2-201ENST00000359276 CCDC27Q2M243 656 aa20.08■□□□□ 0.81
CTPS2-201ENST00000359276 EFCAB2Q5VUJ9 269 aa20.08■□□□□ 0.81
CTPS2-201ENST00000359276 ATP10BO94823 1461 aa20.08■□□□□ 0.8
CTPS2-201ENST00000359276 ZNF771Q7L3S4 317 aaPredicted RBP20.07■□□□□ 0.8
CTPS2-201ENST00000359276 CWC22Q9HCG8 908 aaKnown RBP20.07■□□□□ 0.8
CTPS2-201ENST00000359276 ARHGAP5Q13017 1502 aa20.07■□□□□ 0.8
CTPS2-201ENST00000359276 SCAPERQ9BY12 1400 aa20.07■□□□□ 0.8
CTPS2-201ENST00000359276 SHANK2Q9UPX8 1470 aa20.07■□□□□ 0.8
CTPS2-201ENST00000359276 SPC24Q8NBT2 197 aa20.07■□□□□ 0.8
CTPS2-201ENST00000359276 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.06■□□□□ 0.8
CTPS2-201ENST00000359276 KIF3AQ9Y496 699 aa20.06■□□□□ 0.8
CTPS2-201ENST00000359276 AK9Q5TCS8 1911 aa20.06■□□□□ 0.8
CTPS2-201ENST00000359276 MBD3O95983 291 aa20.06■□□□□ 0.8
CTPS2-201ENST00000359276 FBLN1P23142 703 aa20.06■□□□□ 0.8
CTPS2-201ENST00000359276 DIAPH1O60610 1272 aaKnown RBP20.06■□□□□ 0.8
CTPS2-201ENST00000359276 OTUD7AQ8TE49 926 aaPredicted RBP20.06■□□□□ 0.8
CTPS2-201ENST00000359276 CHMP3Q9Y3E7 222 aa20.05■□□□□ 0.8
CTPS2-201ENST00000359276 ATAD2Q6PL18 1390 aa20.05■□□□□ 0.8
CTPS2-201ENST00000359276 MAPK8IP2Q13387 824 aaPredicted RBP20.05■□□□□ 0.8
CTPS2-201ENST00000359276 TRIM35Q9UPQ4 493 aa20.05■□□□□ 0.8
CTPS2-201ENST00000359276 REC8O95072 547 aa20.04■□□□□ 0.8
CTPS2-201ENST00000359276 MCM5P33992 734 aa20.04■□□□□ 0.8
CTPS2-201ENST00000359276 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.04■□□□□ 0.8
CTPS2-201ENST00000359276 TRIM6-TRIM34B2RNG4 842 aa20.04■□□□□ 0.8
CTPS2-201ENST00000359276 PRKAR2BP31323 418 aa20.04■□□□□ 0.8
CTPS2-201ENST00000359276 ADAMTS12P58397 1594 aa20.04■□□□□ 0.8
CTPS2-201ENST00000359276 HMGN5P82970 282 aaKnown RBP20.03■□□□□ 0.8
CTPS2-201ENST00000359276 NOLC1Q14978 699 aaKnown RBP eCLIP20.03■□□□□ 0.8
CTPS2-201ENST00000359276 RILPL2Q969X0 211 aa20.03■□□□□ 0.8
CTPS2-201ENST00000359276 EIF2AK4Q9P2K8 1649 aaKnown RBP20.03■□□□□ 0.8
CTPS2-201ENST00000359276 DRC7Q8IY82 874 aa20.03■□□□□ 0.8
CTPS2-201ENST00000359276 KANK1Q14678 1352 aa20.03■□□□□ 0.8
CTPS2-201ENST00000359276 ZBTB7BO15156 539 aaPredicted RBP20.02■□□□□ 0.8
CTPS2-201ENST00000359276 PDCL2Q8N4E4 241 aa20.02■□□□□ 0.8
CTPS2-201ENST00000359276 TSPYL6Q8N831 410 aa20.02■□□□□ 0.8
CTPS2-201ENST00000359276 ANO2Q9NQ90 1003 aa20.02■□□□□ 0.8
CTPS2-201ENST00000359276 CLASP1Q7Z460 1538 aa20.02■□□□□ 0.8
CTPS2-201ENST00000359276 PHF14O94880 888 aa20.02■□□□□ 0.8
CTPS2-201ENST00000359276 GSPT1P15170 499 aaKnown RBP20.02■□□□□ 0.8
CTPS2-201ENST00000359276 SLC4A10Q6U841 1118 aa20.02■□□□□ 0.8
CTPS2-201ENST00000359276 NCOA3Q9Y6Q9 1424 aa20.02■□□□□ 0.8
CTPS2-201ENST00000359276 UPF3BQ9BZI7 483 aaKnown RBP20.02■□□□□ 0.79
CTPS2-201ENST00000359276 GRIN2AQ12879 1464 aa20.01■□□□□ 0.79
CTPS2-201ENST00000359276 CDK11BP21127 795 aaKnown RBP20.01■□□□□ 0.79
CTPS2-201ENST00000359276 PDLIM2Q96JY6 352 aa20.01■□□□□ 0.79
CTPS2-201ENST00000359276 USP26Q9BXU7 913 aa20.01■□□□□ 0.79
CTPS2-201ENST00000359276 STAC3Q96MF2 364 aa20.01■□□□□ 0.79
CTPS2-201ENST00000359276 PHF23Q9BUL5 403 aaPredicted RBP20.01■□□□□ 0.79
CTPS2-201ENST00000359276 TSHZ3Q63HK5 1081 aa20■□□□□ 0.79
CTPS2-201ENST00000359276 PLEKHM2Q8IWE5 1019 aa20■□□□□ 0.79
CTPS2-201ENST00000359276 ADCY10Q96PN6 1610 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms