RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 KIF20BQ96Q89 1820 aa18.84■□□□□ 0.61
PDLIM5-203ENST00000359265 ADGRL3Q9HAR2 1447 aa18.83■□□□□ 0.61
PDLIM5-203ENST00000359265 CCDC125Q86Z20 511 aa18.83■□□□□ 0.6
PDLIM5-203ENST00000359265 ATP7BP35670 1465 aa18.83■□□□□ 0.6
PDLIM5-203ENST00000359265 FMN2Q9NZ56 1722 aa18.83■□□□□ 0.6
PDLIM5-203ENST00000359265 MYBBP1AQ9BQG0 1328 aaKnown RBP18.82■□□□□ 0.6
PDLIM5-203ENST00000359265 ADAMTS2O95450 1211 aa18.82■□□□□ 0.6
PDLIM5-203ENST00000359265 DDX17Q92841 729 aaKnown RBP18.82■□□□□ 0.6
PDLIM5-203ENST00000359265 SLC12A5Q9H2X9 1139 aa18.82■□□□□ 0.6
PDLIM5-203ENST00000359265 NSD3Q9BZ95 1437 aa18.82■□□□□ 0.6
PDLIM5-203ENST00000359265 LRP5O75197 1615 aa18.82■□□□□ 0.6
PDLIM5-203ENST00000359265 MON2Q7Z3U7 1717 aa18.81■□□□□ 0.6
PDLIM5-203ENST00000359265 CNGB1Q14028 1251 aaPredicted RBP18.81■□□□□ 0.6
PDLIM5-203ENST00000359265 PNPLA6Q8IY17 1366 aa18.81■□□□□ 0.6
PDLIM5-203ENST00000359265 LRRC59Q96AG4 307 aaKnown RBP18.8■□□□□ 0.6
PDLIM5-203ENST00000359265 RGPD8O14715 1765 aaPredicted RBP18.79■□□□□ 0.6
PDLIM5-203ENST00000359265 AMER1Q5JTC6 1135 aaPredicted RBP18.79■□□□□ 0.6
PDLIM5-203ENST00000359265 CC2D1BQ5T0F9 858 aaKnown RBP18.79■□□□□ 0.6
PDLIM5-203ENST00000359265 YTHDC1Q96MU7 727 aaKnown RBP18.79■□□□□ 0.6
PDLIM5-203ENST00000359265 CARD14Q9BXL6 1004 aa18.78■□□□□ 0.6
PDLIM5-203ENST00000359265 TERF2IPQ9NYB0 399 aa18.78■□□□□ 0.6
PDLIM5-203ENST00000359265 USP21Q9UK80 565 aa18.78■□□□□ 0.6
PDLIM5-203ENST00000359265 A0A1W2PP64 1363 aa18.78■□□□□ 0.6
PDLIM5-203ENST00000359265 CD163L1Q9NR16 1453 aa18.77■□□□□ 0.6
PDLIM5-203ENST00000359265 PPIP5K1Q6PFW1 1433 aa18.77■□□□□ 0.6
PDLIM5-203ENST00000359265 DEFB132Q7Z7B7 95 aa18.77■□□□□ 0.6
PDLIM5-203ENST00000359265 MRS2Q9HD23 443 aa18.77■□□□□ 0.6
PDLIM5-203ENST00000359265 BRD4O60885 1362 aaPredicted RBP18.77■□□□□ 0.6
PDLIM5-203ENST00000359265 ANKARQ7Z5J8 1434 aa18.76■□□□□ 0.59
PDLIM5-203ENST00000359265 NHSL1Q5SYE7 1610 aa18.76■□□□□ 0.59
PDLIM5-203ENST00000359265 HDGFL2Q7Z4V5 671 aaPredicted RBP18.76■□□□□ 0.59
PDLIM5-203ENST00000359265 TRPC5Q9UL62 973 aaPredicted RBP18.76■□□□□ 0.59
PDLIM5-203ENST00000359265 NSD2O96028 1365 aa18.76■□□□□ 0.59
PDLIM5-203ENST00000359265 DCCP43146 1447 aa18.75■□□□□ 0.59
PDLIM5-203ENST00000359265 NLRP13Q86W25 1043 aa18.74■□□□□ 0.59
PDLIM5-203ENST00000359265 NUDT16Q96DE0 195 aaKnown RBP18.74■□□□□ 0.59
PDLIM5-203ENST00000359265 CGNL1Q0VF96 1302 aa18.74■□□□□ 0.59
PDLIM5-203ENST00000359265 CCDC61Q9Y6R9 512 aa18.73■□□□□ 0.59
PDLIM5-203ENST00000359265 ATRNO75882 1429 aa18.73■□□□□ 0.59
PDLIM5-203ENST00000359265 CCDC184Q52MB2 194 aa18.72■□□□□ 0.59
PDLIM5-203ENST00000359265 FNBP4Q8N3X1 1017 aaPredicted RBP18.72■□□□□ 0.59
PDLIM5-203ENST00000359265 CABP1Q9NZU7 370 aa18.72■□□□□ 0.59
PDLIM5-203ENST00000359265 NRKQ7Z2Y5 1582 aa18.72■□□□□ 0.59
PDLIM5-203ENST00000359265 CENPBP07199 599 aaPredicted RBP18.71■□□□□ 0.59
PDLIM5-203ENST00000359265 CPSF1Q10570 1443 aaKnown RBP18.71■□□□□ 0.59
PDLIM5-203ENST00000359265 PRR36Q9H6K5 1346 aa18.71■□□□□ 0.59
PDLIM5-203ENST00000359265 PSDA5PKW4 1024 aaPredicted RBP18.7■□□□□ 0.58
PDLIM5-203ENST00000359265 MST1RQ04912 1400 aa18.7■□□□□ 0.58
PDLIM5-203ENST00000359265 EDC4Q6P2E9 1401 aaKnown RBP18.69■□□□□ 0.58
PDLIM5-203ENST00000359265 BLMP54132 1417 aaPredicted RBP18.67■□□□□ 0.58
PDLIM5-203ENST00000359265 KIF1AQ12756 1690 aa18.66■□□□□ 0.58
PDLIM5-203ENST00000359265 NUTM2FA1L443 756 aa18.66■□□□□ 0.58
PDLIM5-203ENST00000359265 PPP2R1AP30153 589 aa18.66■□□□□ 0.58
PDLIM5-203ENST00000359265 PLEKHG3A1L390 1219 aa18.65■□□□□ 0.58
PDLIM5-203ENST00000359265 YY1P25490 414 aa18.65■□□□□ 0.58
PDLIM5-203ENST00000359265 MORC1Q86VD1 984 aa18.65■□□□□ 0.58
PDLIM5-203ENST00000359265 ZNF692Q9BU19 519 aaPredicted RBP18.65■□□□□ 0.58
PDLIM5-203ENST00000359265 BCL9LQ86UU0 1499 aa18.64■□□□□ 0.57
PDLIM5-203ENST00000359265 FAM9BQ8IZU0 186 aa18.63■□□□□ 0.57
PDLIM5-203ENST00000359265 GJD4Q96KN9 370 aaPredicted RBP18.62■□□□□ 0.57
PDLIM5-203ENST00000359265 POLR3AO14802 1390 aaPredicted RBP18.62■□□□□ 0.57
PDLIM5-203ENST00000359265 C1orf167Q5SNV9 1468 aa18.62■□□□□ 0.57
PDLIM5-203ENST00000359265 USP6P35125 1406 aa18.61■□□□□ 0.57
PDLIM5-203ENST00000359265 ACEP12821 1306 aa18.61■□□□□ 0.57
PDLIM5-203ENST00000359265 IFFO2Q5TF58 517 aa18.61■□□□□ 0.57
PDLIM5-203ENST00000359265 NGDNQ8NEJ9 315 aaKnown RBP18.6■□□□□ 0.57
PDLIM5-203ENST00000359265 PNISRQ8TF01 805 aaKnown RBP18.6■□□□□ 0.57
PDLIM5-203ENST00000359265 PHF8Q9UPP1 1060 aa18.6■□□□□ 0.57
PDLIM5-203ENST00000359265 ESCO1Q5FWF5 840 aa18.59■□□□□ 0.57
PDLIM5-203ENST00000359265 MAP2P11137 1827 aaKnown RBP18.58■□□□□ 0.57
PDLIM5-203ENST00000359265 BRWD3Q6RI45 1802 aa18.58■□□□□ 0.57
PDLIM5-203ENST00000359265 FYB1O15117 783 aa18.58■□□□□ 0.56
PDLIM5-203ENST00000359265 PMFBP1Q8TBY8 1022 aa18.58■□□□□ 0.56
PDLIM5-203ENST00000359265 GGNBP2Q9H3C7 697 aa18.58■□□□□ 0.56
PDLIM5-203ENST00000359265 USP54Q70EL1 1684 aa18.57■□□□□ 0.56
PDLIM5-203ENST00000359265 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.57■□□□□ 0.56
PDLIM5-203ENST00000359265 INSRP06213 1382 aa18.56■□□□□ 0.56
PDLIM5-203ENST00000359265 SOS2Q07890 1332 aaPredicted RBP18.55■□□□□ 0.56
PDLIM5-203ENST00000359265 HNRNPUQ00839 825 aaKnown RBP eCLIP18.55■□□□□ 0.56
PDLIM5-203ENST00000359265 TTC21AQ8NDW8 1320 aa18.54■□□□□ 0.56
PDLIM5-203ENST00000359265 PIK3C2AO00443 1686 aa18.54■□□□□ 0.56
PDLIM5-203ENST00000359265 SF3B2Q13435 895 aaKnown RBP18.54■□□□□ 0.56
PDLIM5-203ENST00000359265 SSH2Q76I76 1423 aa18.54■□□□□ 0.56
PDLIM5-203ENST00000359265 TTC21BQ7Z4L5 1316 aa18.53■□□□□ 0.56
PDLIM5-203ENST00000359265 GLI3P10071 1580 aa18.53■□□□□ 0.56
PDLIM5-203ENST00000359265 TNNT2P45379 298 aaPredicted RBP18.53■□□□□ 0.56
PDLIM5-203ENST00000359265 NME9Q86XW9 330 aa18.52■□□□□ 0.56
PDLIM5-203ENST00000359265 CFAP53Q96M91 514 aa18.52■□□□□ 0.56
PDLIM5-203ENST00000359265 ORAI2Q96SN7 254 aa18.52■□□□□ 0.56
PDLIM5-203ENST00000359265 MARF1Q9Y4F3 1742 aaKnown RBP18.52■□□□□ 0.55
PDLIM5-203ENST00000359265 OVOS2A0A0J9YW53 1432 aa18.51■□□□□ 0.55
PDLIM5-203ENST00000359265 OVOS2Q6IE36 1432 aa18.51■□□□□ 0.55
PDLIM5-203ENST00000359265 WDR43Q15061 677 aaKnown RBP eCLIP18.51■□□□□ 0.55
PDLIM5-203ENST00000359265 PSME1Q06323 249 aa18.5■□□□□ 0.55
PDLIM5-203ENST00000359265 COG3Q96JB2 828 aa18.5■□□□□ 0.55
PDLIM5-203ENST00000359265 R3HDM1Q15032 1099 aaKnown RBP18.49■□□□□ 0.55
PDLIM5-203ENST00000359265 TRPM3Q9HCF6 1732 aaPredicted RBP18.49■□□□□ 0.55
PDLIM5-203ENST00000359265 COL22A1Q8NFW1 1626 aaPredicted RBP18.49■□□□□ 0.55
PDLIM5-203ENST00000359265 NPHP3Q7Z494 1330 aa18.49■□□□□ 0.55
PDLIM5-203ENST00000359265 AATKQ6ZMQ8 1374 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms