RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 POLR3AO14802 1390 aaPredicted RBP18.06■□□□□ 0.48
CCDC197-201ENST00000359253 ORAI2Q96SN7 254 aa18.06■□□□□ 0.48
CCDC197-201ENST00000359253 EDC4Q6P2E9 1401 aaKnown RBP18.06■□□□□ 0.48
CCDC197-201ENST00000359253 ANKARQ7Z5J8 1434 aa18.05■□□□□ 0.48
CCDC197-201ENST00000359253 WDR43Q15061 677 aaKnown RBP eCLIP18.03■□□□□ 0.48
CCDC197-201ENST00000359253 ROBO1Q9Y6N7 1651 aa18.03■□□□□ 0.48
CCDC197-201ENST00000359253 FYB1O15117 783 aa18.02■□□□□ 0.48
CCDC197-201ENST00000359253 LRRC59Q96AG4 307 aaKnown RBP18.02■□□□□ 0.48
CCDC197-201ENST00000359253 CFAP53Q96M91 514 aa18.02■□□□□ 0.48
CCDC197-201ENST00000359253 ANKRD26Q9UPS8 1709 aa18.02■□□□□ 0.48
CCDC197-201ENST00000359253 NPHP3Q7Z494 1330 aa18.01■□□□□ 0.47
CCDC197-201ENST00000359253 NUTM2FA1L443 756 aa18.01■□□□□ 0.47
CCDC197-201ENST00000359253 PHF8Q9UPP1 1060 aa18.01■□□□□ 0.47
CCDC197-201ENST00000359253 TOPAZ1Q8N9V7 1692 aa18.01■□□□□ 0.47
CCDC197-201ENST00000359253 ITSN1Q15811 1721 aa18.01■□□□□ 0.47
CCDC197-201ENST00000359253 PRR36Q9H6K5 1346 aa18■□□□□ 0.47
CCDC197-201ENST00000359253 NGEFQ8N5V2 710 aa18■□□□□ 0.47
CCDC197-201ENST00000359253 SOS2Q07890 1332 aaPredicted RBP17.99■□□□□ 0.47
CCDC197-201ENST00000359253 BLMP54132 1417 aaPredicted RBP17.99■□□□□ 0.47
CCDC197-201ENST00000359253 FMN2Q9NZ56 1722 aa17.99■□□□□ 0.47
CCDC197-201ENST00000359253 FOXO3O43524 673 aa17.99■□□□□ 0.47
CCDC197-201ENST00000359253 AKAP12Q02952 1782 aa17.99■□□□□ 0.47
CCDC197-201ENST00000359253 MON2Q7Z3U7 1717 aa17.98■□□□□ 0.47
CCDC197-201ENST00000359253 KIF20BQ96Q89 1820 aa17.98■□□□□ 0.47
CCDC197-201ENST00000359253 PSME1Q06323 249 aa17.98■□□□□ 0.47
CCDC197-201ENST00000359253 AHDC1Q5TGY3 1603 aaPredicted RBP17.98■□□□□ 0.47
CCDC197-201ENST00000359253 PDE3BQ13370 1112 aa17.97■□□□□ 0.47
CCDC197-201ENST00000359253 GGNBP2Q9H3C7 697 aa17.95■□□□□ 0.46
CCDC197-201ENST00000359253 ACEP12821 1306 aa17.95■□□□□ 0.46
CCDC197-201ENST00000359253 TTC21AQ8NDW8 1320 aa17.95■□□□□ 0.46
CCDC197-201ENST00000359253 JCADQ9P266 1359 aa17.94■□□□□ 0.46
CCDC197-201ENST00000359253 MTHFSP49914 203 aa17.94■□□□□ 0.46
CCDC197-201ENST00000359253 KRT28Q7Z3Y7 464 aa17.94■□□□□ 0.46
CCDC197-201ENST00000359253 ADAMTS8Q9UP79 889 aa17.94■□□□□ 0.46
CCDC197-201ENST00000359253 AATKQ6ZMQ8 1374 aa17.93■□□□□ 0.46
CCDC197-201ENST00000359253 NGDNQ8NEJ9 315 aaKnown RBP17.93■□□□□ 0.46
CCDC197-201ENST00000359253 PMFBP1Q8TBY8 1022 aa17.93■□□□□ 0.46
CCDC197-201ENST00000359253 GTF3C3Q9Y5Q9 886 aa17.93■□□□□ 0.46
CCDC197-201ENST00000359253 USP6P35125 1406 aa17.92■□□□□ 0.46
CCDC197-201ENST00000359253 COG3Q96JB2 828 aa17.92■□□□□ 0.46
CCDC197-201ENST00000359253 SPATA31A6Q5VVP1 1343 aa17.92■□□□□ 0.46
CCDC197-201ENST00000359253 TTC21BQ7Z4L5 1316 aa17.92■□□□□ 0.46
CCDC197-201ENST00000359253 KIF1AQ12756 1690 aa17.91■□□□□ 0.46
CCDC197-201ENST00000359253 NCBP3Q53F19 620 aaKnown RBP17.91■□□□□ 0.46
CCDC197-201ENST00000359253 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.91■□□□□ 0.46
CCDC197-201ENST00000359253 DDX17Q92841 729 aaKnown RBP17.91■□□□□ 0.46
CCDC197-201ENST00000359253 NUDCQ9Y266 331 aa17.91■□□□□ 0.46
CCDC197-201ENST00000359253 PHLPP1O60346 1717 aa17.91■□□□□ 0.46
CCDC197-201ENST00000359253 NHSL1Q5SYE7 1610 aa17.9■□□□□ 0.46
CCDC197-201ENST00000359253 SSH2Q76I76 1423 aa17.9■□□□□ 0.46
CCDC197-201ENST00000359253 TNNT2P45379 298 aaPredicted RBP17.9■□□□□ 0.46
CCDC197-201ENST00000359253 SBNO1A3KN83 1393 aa17.9■□□□□ 0.46
CCDC197-201ENST00000359253 PNPLA6Q8IY17 1366 aa17.9■□□□□ 0.46
CCDC197-201ENST00000359253 SMG6Q86US8 1419 aaKnown RBP17.89■□□□□ 0.46
CCDC197-201ENST00000359253 NRKQ7Z2Y5 1582 aa17.89■□□□□ 0.45
CCDC197-201ENST00000359253 COL16A1Q07092 1604 aaPredicted RBP17.88■□□□□ 0.45
CCDC197-201ENST00000359253 PNNQ9H307 717 aaKnown RBP17.88■□□□□ 0.45
CCDC197-201ENST00000359253 SPATA31A3Q5VYP0 1347 aa17.88■□□□□ 0.45
CCDC197-201ENST00000359253 RGPD8O14715 1765 aaPredicted RBP17.87■□□□□ 0.45
CCDC197-201ENST00000359253 PXDNQ92626 1479 aa17.87■□□□□ 0.45
CCDC197-201ENST00000359253 NME9Q86XW9 330 aa17.86■□□□□ 0.45
CCDC197-201ENST00000359253 USP31Q70CQ4 1352 aa17.86■□□□□ 0.45
CCDC197-201ENST00000359253 SHPRHQ149N8 1683 aa17.84■□□□□ 0.45
CCDC197-201ENST00000359253 XPCQ01831 940 aaPredicted RBP17.84■□□□□ 0.45
CCDC197-201ENST00000359253 RUNDC1Q96C34 613 aa17.84■□□□□ 0.45
CCDC197-201ENST00000359253 OVOS2A0A0J9YW53 1432 aa17.83■□□□□ 0.45
CCDC197-201ENST00000359253 OVOS2Q6IE36 1432 aa17.83■□□□□ 0.45
CCDC197-201ENST00000359253 ARHGEF10O15013 1369 aa17.83■□□□□ 0.45
CCDC197-201ENST00000359253 DIAPH1O60610 1272 aaKnown RBP17.83■□□□□ 0.44
CCDC197-201ENST00000359253 NEFLP07196 543 aa17.83■□□□□ 0.44
CCDC197-201ENST00000359253 POLKQ9UBT6 870 aa17.83■□□□□ 0.44
CCDC197-201ENST00000359253 COL3A1P02461 1466 aaPredicted RBP17.82■□□□□ 0.44
CCDC197-201ENST00000359253 CDK12Q9NYV4 1490 aaPredicted RBP17.82■□□□□ 0.44
CCDC197-201ENST00000359253 PAK3O75914 559 aaPredicted RBP17.79■□□□□ 0.44
CCDC197-201ENST00000359253 TNS3Q68CZ2 1445 aa17.79■□□□□ 0.44
CCDC197-201ENST00000359253 KIF24Q5T7B8 1368 aa17.79■□□□□ 0.44
CCDC197-201ENST00000359253 USP54Q70EL1 1684 aa17.78■□□□□ 0.44
CCDC197-201ENST00000359253 U2AF1L5P0DN76 240 aaPredicted RBP17.78■□□□□ 0.44
CCDC197-201ENST00000359253 U2AF1Q01081 240 aaKnown RBP eCLIP17.78■□□□□ 0.44
CCDC197-201ENST00000359253 MAP2P11137 1827 aaKnown RBP17.77■□□□□ 0.44
CCDC197-201ENST00000359253 ZNF521Q96K83 1311 aa17.77■□□□□ 0.44
CCDC197-201ENST00000359253 FCHSD2O94868 740 aa17.77■□□□□ 0.44
CCDC197-201ENST00000359253 CCDC27Q2M243 656 aa17.77■□□□□ 0.44
CCDC197-201ENST00000359253 ERICH6BQ5W0A0 696 aa17.77■□□□□ 0.44
CCDC197-201ENST00000359253 APAF1O14727 1248 aa17.76■□□□□ 0.43
CCDC197-201ENST00000359253 GOLGA2Q08379 1002 aa17.76■□□□□ 0.43
CCDC197-201ENST00000359253 LMOD2Q6P5Q4 547 aa17.76■□□□□ 0.43
CCDC197-201ENST00000359253 ABTB2Q8N961 1025 aa17.76■□□□□ 0.43
CCDC197-201ENST00000359253 ZRANB1Q9UGI0 708 aa17.75■□□□□ 0.43
CCDC197-201ENST00000359253 COL22A1Q8NFW1 1626 aaPredicted RBP17.74■□□□□ 0.43
CCDC197-201ENST00000359253 NUTM2BA6NNL0 878 aaPredicted RBP17.74■□□□□ 0.43
CCDC197-201ENST00000359253 NUTM2EB1AL46 878 aaPredicted RBP17.74■□□□□ 0.43
CCDC197-201ENST00000359253 NEFMP07197 916 aa17.74■□□□□ 0.43
CCDC197-201ENST00000359253 NUTM2AQ8IVF1 878 aaPredicted RBP17.74■□□□□ 0.43
CCDC197-201ENST00000359253 CCDC146Q8IYE0 955 aa17.74■□□□□ 0.43
CCDC197-201ENST00000359253 U2SURPO15042 1029 aaKnown RBP17.73■□□□□ 0.43
CCDC197-201ENST00000359253 NLRP6P59044 892 aa17.73■□□□□ 0.43
CCDC197-201ENST00000359253 MEX3CQ5U5Q3 659 aaKnown RBP17.73■□□□□ 0.43
CCDC197-201ENST00000359253 SUPT16HQ9Y5B9 1047 aaKnown RBP17.73■□□□□ 0.43
CCDC197-201ENST00000359253 PIK3C2AO00443 1686 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms