RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 ARID3CA6NKF2 412 aa13.85□□□□□ -0.19
SEPSECS-201ENST00000358971 MMP14P50281 582 aa13.85□□□□□ -0.19
SEPSECS-201ENST00000358971 HNRNPH2P55795 449 aaKnown RBP13.85□□□□□ -0.19
SEPSECS-201ENST00000358971 MLECQ14165 292 aa13.85□□□□□ -0.19
SEPSECS-201ENST00000358971 SYAP1Q96A49 352 aaPredicted RBP13.85□□□□□ -0.19
SEPSECS-201ENST00000358971 YY1AP1Q9H869 796 aa13.85□□□□□ -0.19
SEPSECS-201ENST00000358971 CYP2E1P05181 493 aaPredicted RBP13.85□□□□□ -0.19
SEPSECS-201ENST00000358971 NAA30Q147X3 362 aaPredicted RBP13.85□□□□□ -0.19
SEPSECS-201ENST00000358971 ROCK1Q13464 1354 aa13.85□□□□□ -0.19
SEPSECS-201ENST00000358971 TMF1P82094 1093 aa13.84□□□□□ -0.19
SEPSECS-201ENST00000358971 KIAA1524Q8TCG1 905 aa13.84□□□□□ -0.19
SEPSECS-201ENST00000358971 WWC1Q8IX03 1113 aa13.84□□□□□ -0.19
SEPSECS-201ENST00000358971 PYCARDQ9ULZ3 195 aa13.84□□□□□ -0.19
SEPSECS-201ENST00000358971 GTF2A1P52655 376 aaPredicted RBP13.83□□□□□ -0.2
SEPSECS-201ENST00000358971 CDCA8Q53HL2 280 aa13.83□□□□□ -0.2
SEPSECS-201ENST00000358971 CLASP1Q7Z460 1538 aa13.83□□□□□ -0.2
SEPSECS-201ENST00000358971 NPC1L1Q9UHC9 1359 aa13.83□□□□□ -0.2
SEPSECS-201ENST00000358971 PSEN1P49768 467 aa13.83□□□□□ -0.2
SEPSECS-201ENST00000358971 RAD51AP2Q09MP3 1159 aa13.83□□□□□ -0.2
SEPSECS-201ENST00000358971 DAPK1P53355 1430 aa13.83□□□□□ -0.2
SEPSECS-201ENST00000358971 KCNG1Q9UIX4 513 aa13.82□□□□□ -0.2
SEPSECS-201ENST00000358971 GAPVD1Q14C86 1478 aa13.82□□□□□ -0.2
SEPSECS-201ENST00000358971 DZIP1LQ8IYY4 767 aaKnown RBP13.82□□□□□ -0.2
SEPSECS-201ENST00000358971 ZGPATQ8N5A5 531 aaKnown RBP13.82□□□□□ -0.2
SEPSECS-201ENST00000358971 FAM184AQ8NB25 1140 aa13.82□□□□□ -0.2
SEPSECS-201ENST00000358971 PHF14O94880 888 aa13.82□□□□□ -0.2
SEPSECS-201ENST00000358971 UVSSAQ2YD98 709 aa13.82□□□□□ -0.2
SEPSECS-201ENST00000358971 CNPY4Q8N129 248 aa13.82□□□□□ -0.2
SEPSECS-201ENST00000358971 CWC22Q9HCG8 908 aaKnown RBP13.82□□□□□ -0.2
SEPSECS-201ENST00000358971 FAM135AQ9P2D6 1515 aa13.81□□□□□ -0.2
SEPSECS-201ENST00000358971 HDAC1Q13547 482 aaPredicted RBP13.81□□□□□ -0.2
SEPSECS-201ENST00000358971 TPRNQ4KMQ1 711 aa13.81□□□□□ -0.2
SEPSECS-201ENST00000358971 ITPRIPQ8IWB1 547 aa13.81□□□□□ -0.2
SEPSECS-201ENST00000358971 RRP7AQ9Y3A4 280 aaKnown RBP13.81□□□□□ -0.2
SEPSECS-201ENST00000358971 ZKSCAN2Q63HK3 967 aa13.81□□□□□ -0.2
SEPSECS-201ENST00000358971 TBC1D9Q6ZT07 1266 aa13.81□□□□□ -0.2
SEPSECS-201ENST00000358971 ST7Q9NRC1 585 aa13.81□□□□□ -0.2
SEPSECS-201ENST00000358971 ZNF644Q9H582 1327 aaPredicted RBP13.81□□□□□ -0.2
SEPSECS-201ENST00000358971 SPC24Q8NBT2 197 aa13.8□□□□□ -0.2
SEPSECS-201ENST00000358971 LRRIQ1Q96JM4 1722 aa13.8□□□□□ -0.2
SEPSECS-201ENST00000358971 ARHGEF11O15085 1522 aa13.8□□□□□ -0.2
SEPSECS-201ENST00000358971 RABEP1Q15276 862 aa13.8□□□□□ -0.2
SEPSECS-201ENST00000358971 SYCP1Q15431 976 aa13.8□□□□□ -0.2
SEPSECS-201ENST00000358971 RASSF4Q9H2L5 321 aa13.8□□□□□ -0.2
SEPSECS-201ENST00000358971 C16orf45Q96MC5 204 aaPredicted RBP13.8□□□□□ -0.2
SEPSECS-201ENST00000358971 NOL10Q9BSC4 688 aaKnown RBP13.8□□□□□ -0.2
SEPSECS-201ENST00000358971 MAGI3Q5TCQ9 1506 aa13.8□□□□□ -0.2
SEPSECS-201ENST00000358971 NCBP3Q53F19 620 aaKnown RBP13.79□□□□□ -0.2
SEPSECS-201ENST00000358971 BMP2KLQ5H9B9 411 aa13.79□□□□□ -0.2
SEPSECS-201ENST00000358971 CCDC112Q8NEF3 446 aa13.79□□□□□ -0.2
SEPSECS-201ENST00000358971 ZDHHC9Q9Y397 364 aa13.79□□□□□ -0.2
SEPSECS-201ENST00000358971 FOXD4L6Q3SYB3 417 aaPredicted RBP13.79□□□□□ -0.2
SEPSECS-201ENST00000358971 FOXD4L3Q6VB84 417 aaPredicted RBP13.79□□□□□ -0.2
SEPSECS-201ENST00000358971 TESK2Q96S53 571 aa13.79□□□□□ -0.2
SEPSECS-201ENST00000358971 PRDM2Q13029 1718 aa13.79□□□□□ -0.2
SEPSECS-201ENST00000358971 GRIN2BQ13224 1484 aa13.79□□□□□ -0.2
SEPSECS-201ENST00000358971 COL17A1Q9UMD9 1497 aaPredicted RBP13.79□□□□□ -0.2
SEPSECS-201ENST00000358971 ABCC5O15440 1437 aa13.79□□□□□ -0.2
SEPSECS-201ENST00000358971 PRR29P0C7W0 189 aa13.79□□□□□ -0.2
SEPSECS-201ENST00000358971 RGL3Q3MIN7 710 aa13.79□□□□□ -0.2
SEPSECS-201ENST00000358971 BCCIPQ9P287 314 aaKnown RBP eCLIP13.79□□□□□ -0.2
SEPSECS-201ENST00000358971 SMTNL1A8MU46 457 aa13.78□□□□□ -0.2
SEPSECS-201ENST00000358971 HCLS1P14317 486 aaPredicted RBP13.78□□□□□ -0.2
SEPSECS-201ENST00000358971 AXDND1Q5T1B0 1012 aaPredicted RBP13.78□□□□□ -0.2
SEPSECS-201ENST00000358971 KIAA0586Q9BVV6 1533 aa13.77□□□□□ -0.2
SEPSECS-201ENST00000358971 DHX16O60231 1041 aaKnown RBP13.77□□□□□ -0.21
SEPSECS-201ENST00000358971 CYP2C19P33261 490 aa13.77□□□□□ -0.21
SEPSECS-201ENST00000358971 CHD1LQ86WJ1 897 aa13.77□□□□□ -0.21
SEPSECS-201ENST00000358971 ZNF397Q8NF99 534 aaPredicted RBP13.77□□□□□ -0.21
SEPSECS-201ENST00000358971 KCNF1Q9H3M0 494 aa13.77□□□□□ -0.21
SEPSECS-201ENST00000358971 NUCB1Q02818 461 aa13.77□□□□□ -0.21
SEPSECS-201ENST00000358971 C10orf67Q8IYJ2 551 aa13.77□□□□□ -0.21
SEPSECS-201ENST00000358971 U2SURPO15042 1029 aaKnown RBP13.76□□□□□ -0.21
SEPSECS-201ENST00000358971 LMOD3Q0VAK6 560 aa13.76□□□□□ -0.21
SEPSECS-201ENST00000358971 ZNF592Q92610 1267 aa13.76□□□□□ -0.21
SEPSECS-201ENST00000358971 ERBINQ96RT1 1412 aa13.76□□□□□ -0.21
SEPSECS-201ENST00000358971 GOLGA6L6A8MZA4 724 aa13.76□□□□□ -0.21
SEPSECS-201ENST00000358971 KMT5BQ4FZB7 885 aa13.76□□□□□ -0.21
SEPSECS-201ENST00000358971 TOMM22Q9NS69 142 aa13.76□□□□□ -0.21
SEPSECS-201ENST00000358971 IFT57Q9NWB7 429 aa13.76□□□□□ -0.21
SEPSECS-201ENST00000358971 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.76□□□□□ -0.21
SEPSECS-201ENST00000358971 DDX19BQ9UMR2 479 aa13.76□□□□□ -0.21
SEPSECS-201ENST00000358971 V9GYY5 206 aaPredicted RBP13.76□□□□□ -0.21
SEPSECS-201ENST00000358971 ARHGEF12Q9NZN5 1544 aa13.76□□□□□ -0.21
SEPSECS-201ENST00000358971 KDM4AO75164 1064 aa13.75□□□□□ -0.21
SEPSECS-201ENST00000358971 TPM3P06753 285 aa13.75□□□□□ -0.21
SEPSECS-201ENST00000358971 TNNT1P13805 278 aa13.75□□□□□ -0.21
SEPSECS-201ENST00000358971 FAM193AP78312 1265 aa13.75□□□□□ -0.21
SEPSECS-201ENST00000358971 ANKRD45Q5TZF3 282 aa13.75□□□□□ -0.21
SEPSECS-201ENST00000358971 CREBRFQ8IUR6 639 aa13.75□□□□□ -0.21
SEPSECS-201ENST00000358971 ZNF622Q969S3 477 aaKnown RBP eCLIP13.75□□□□□ -0.21
SEPSECS-201ENST00000358971 PATL2C9JE40 543 aaKnown RBP13.75□□□□□ -0.21
SEPSECS-201ENST00000358971 NOP2P46087 812 aaKnown RBP13.75□□□□□ -0.21
SEPSECS-201ENST00000358971 EP400NLQ6ZTU2 488 aa13.75□□□□□ -0.21
SEPSECS-201ENST00000358971 MYCBPQ99417 103 aaPredicted RBP13.75□□□□□ -0.21
SEPSECS-201ENST00000358971 SRPK2P78362 688 aaKnown RBP13.75□□□□□ -0.21
SEPSECS-201ENST00000358971 SAMD1Q6SPF0 538 aaPredicted RBP13.75□□□□□ -0.21
SEPSECS-201ENST00000358971 GPATCH11Q8N954 259 aa13.75□□□□□ -0.21
SEPSECS-201ENST00000358971 RTF1Q92541 710 aaKnown RBP13.75□□□□□ -0.21
SEPSECS-201ENST00000358971 ST18O60284 1047 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms