RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 KIF20BQ96Q89 1820 aa10.99□□□□□ -0.65
RFX3-202ENST00000358730 MED14O60244 1454 aa10.99□□□□□ -0.65
RFX3-202ENST00000358730 FYB1O15117 783 aa10.98□□□□□ -0.65
RFX3-202ENST00000358730 ALKQ9UM73 1620 aa10.98□□□□□ -0.65
RFX3-202ENST00000358730 SEC24BO95487 1268 aa10.98□□□□□ -0.65
RFX3-202ENST00000358730 CT47B1P0C2W7 299 aaPredicted RBP10.98□□□□□ -0.65
RFX3-202ENST00000358730 SMC4Q9NTJ3 1288 aa10.98□□□□□ -0.65
RFX3-202ENST00000358730 FBXO31Q5XUX0 539 aaPredicted RBP10.98□□□□□ -0.65
RFX3-202ENST00000358730 HDGFL2Q7Z4V5 671 aaPredicted RBP10.98□□□□□ -0.65
RFX3-202ENST00000358730 RWDD1Q9H446 243 aaPredicted RBP10.98□□□□□ -0.65
RFX3-202ENST00000358730 PDZRN3Q9UPQ7 1066 aa10.98□□□□□ -0.65
RFX3-202ENST00000358730 EXOSC9Q06265 439 aaKnown RBP10.97□□□□□ -0.65
RFX3-202ENST00000358730 DZIP1LQ8IYY4 767 aaKnown RBP10.97□□□□□ -0.65
RFX3-202ENST00000358730 STAG3Q9UJ98 1225 aa10.97□□□□□ -0.65
RFX3-202ENST00000358730 TRIM35Q9UPQ4 493 aa10.97□□□□□ -0.65
RFX3-202ENST00000358730 ZMYM3Q14202 1370 aa10.96□□□□□ -0.65
RFX3-202ENST00000358730 CDK19Q9BWU1 502 aa10.96□□□□□ -0.66
RFX3-202ENST00000358730 ARHGEF40Q8TER5 1519 aa10.96□□□□□ -0.66
RFX3-202ENST00000358730 DIAPH1O60610 1272 aaKnown RBP10.95□□□□□ -0.66
RFX3-202ENST00000358730 TRIM27P14373 513 aa10.95□□□□□ -0.66
RFX3-202ENST00000358730 UPF2Q9HAU5 1272 aaKnown RBP10.95□□□□□ -0.66
RFX3-202ENST00000358730 LRRC7Q96NW7 1537 aa10.95□□□□□ -0.66
RFX3-202ENST00000358730 RIPK4P57078 832 aa10.95□□□□□ -0.66
RFX3-202ENST00000358730 SSH1Q8WYL5 1049 aa10.95□□□□□ -0.66
RFX3-202ENST00000358730 CABP1Q9NZU7 370 aa10.95□□□□□ -0.66
RFX3-202ENST00000358730 ITPRIPQ8IWB1 547 aa10.94□□□□□ -0.66
RFX3-202ENST00000358730 IL16Q14005 1332 aa10.94□□□□□ -0.66
RFX3-202ENST00000358730 BECN1Q14457 450 aa10.94□□□□□ -0.66
RFX3-202ENST00000358730 GSE1Q14687 1217 aa10.94□□□□□ -0.66
RFX3-202ENST00000358730 PNPLA6Q8IY17 1366 aa10.93□□□□□ -0.66
RFX3-202ENST00000358730 FRAT2O75474 233 aaPredicted RBP10.93□□□□□ -0.66
RFX3-202ENST00000358730 CDC42BPGQ6DT37 1551 aa10.93□□□□□ -0.66
RFX3-202ENST00000358730 ATF7IPQ6VMQ6 1270 aa10.93□□□□□ -0.66
RFX3-202ENST00000358730 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.93□□□□□ -0.66
RFX3-202ENST00000358730 PNNQ9H307 717 aaKnown RBP10.93□□□□□ -0.66
RFX3-202ENST00000358730 DDX19BQ9UMR2 479 aa10.93□□□□□ -0.66
RFX3-202ENST00000358730 NOB1Q9ULX3 412 aaKnown RBP10.92□□□□□ -0.66
RFX3-202ENST00000358730 ATP7BP35670 1465 aa10.92□□□□□ -0.66
RFX3-202ENST00000358730 TSPOAP1O95153 1857 aa10.92□□□□□ -0.66
RFX3-202ENST00000358730 KIF16BQ96L93 1317 aa10.92□□□□□ -0.66
RFX3-202ENST00000358730 DLC1Q96QB1 1528 aa10.91□□□□□ -0.66
RFX3-202ENST00000358730 TBC1D32Q96NH3 1257 aa10.91□□□□□ -0.66
RFX3-202ENST00000358730 SETD1AO15047 1707 aaKnown RBP10.91□□□□□ -0.66
RFX3-202ENST00000358730 RIMBP3CA6NJZ7 1639 aa10.91□□□□□ -0.66
RFX3-202ENST00000358730 RIMBP3BA6NNM3 1639 aa10.91□□□□□ -0.66
RFX3-202ENST00000358730 RIMBP3Q9UFD9 1639 aa10.91□□□□□ -0.66
RFX3-202ENST00000358730 WAPLQ7Z5K2 1190 aa10.91□□□□□ -0.66
RFX3-202ENST00000358730 A2ML1A8K2U0 1454 aa10.91□□□□□ -0.66
RFX3-202ENST00000358730 FAM135BQ49AJ0 1406 aa10.91□□□□□ -0.66
RFX3-202ENST00000358730 PRKAR2BP31323 418 aa10.9□□□□□ -0.66
RFX3-202ENST00000358730 TMEM57Q8N5G2 664 aa10.9□□□□□ -0.66
RFX3-202ENST00000358730 MAP2P11137 1827 aaKnown RBP10.9□□□□□ -0.66
RFX3-202ENST00000358730 FCHSD2O94868 740 aa10.9□□□□□ -0.66
RFX3-202ENST00000358730 FBLN1P23142 703 aa10.9□□□□□ -0.66
RFX3-202ENST00000358730 HDAC1Q13547 482 aaPredicted RBP10.9□□□□□ -0.66
RFX3-202ENST00000358730 CYB5RLQ6IPT4 315 aa10.9□□□□□ -0.66
RFX3-202ENST00000358730 IL27Q8NEV9 243 aa10.9□□□□□ -0.66
RFX3-202ENST00000358730 SLKQ9H2G2 1235 aaPredicted RBP10.9□□□□□ -0.66
RFX3-202ENST00000358730 RIMS2Q9UQ26 1411 aa10.9□□□□□ -0.66
RFX3-202ENST00000358730 FAM69CQ0P6D2 419 aa10.89□□□□□ -0.67
RFX3-202ENST00000358730 RSPH6AQ9H0K4 717 aa10.89□□□□□ -0.67
RFX3-202ENST00000358730 DIP2BQ9P265 1576 aa10.89□□□□□ -0.67
RFX3-202ENST00000358730 REREQ9P2R6 1566 aa10.89□□□□□ -0.67
RFX3-202ENST00000358730 SPATA31D1Q6ZQQ2 1576 aa10.89□□□□□ -0.67
RFX3-202ENST00000358730 IPO8O15397 1037 aaKnown RBP10.89□□□□□ -0.67
RFX3-202ENST00000358730 POLKQ9UBT6 870 aa10.89□□□□□ -0.67
RFX3-202ENST00000358730 AGLP35573 1532 aa10.88□□□□□ -0.67
RFX3-202ENST00000358730 HMOX1P09601 288 aa10.88□□□□□ -0.67
RFX3-202ENST00000358730 ALDH1L2Q3SY69 923 aa10.87□□□□□ -0.67
RFX3-202ENST00000358730 ZBTB40Q9NUA8 1239 aa10.87□□□□□ -0.67
RFX3-202ENST00000358730 EDC4Q6P2E9 1401 aaKnown RBP10.87□□□□□ -0.67
RFX3-202ENST00000358730 PPIP5K1Q6PFW1 1433 aa10.87□□□□□ -0.67
RFX3-202ENST00000358730 MLECQ14165 292 aa10.86□□□□□ -0.67
RFX3-202ENST00000358730 SMC5Q8IY18 1101 aa10.86□□□□□ -0.67
RFX3-202ENST00000358730 TBC1D2Q9BYX2 928 aa10.86□□□□□ -0.67
RFX3-202ENST00000358730 EMILIN1Q9Y6C2 1016 aa10.86□□□□□ -0.67
RFX3-202ENST00000358730 NRXN3Q9Y4C0 1643 aa10.86□□□□□ -0.67
RFX3-202ENST00000358730 MFAP1P55081 439 aaKnown RBP10.86□□□□□ -0.67
RFX3-202ENST00000358730 THUMPD2Q9BTF0 503 aaKnown RBP10.86□□□□□ -0.67
RFX3-202ENST00000358730 NFE2L2Q16236 605 aa10.86□□□□□ -0.67
RFX3-202ENST00000358730 PHACTR3Q96KR7 559 aa10.86□□□□□ -0.67
RFX3-202ENST00000358730 PPP6R1Q9UPN7 881 aa10.86□□□□□ -0.67
RFX3-202ENST00000358730 CDK12Q9NYV4 1490 aaPredicted RBP10.85□□□□□ -0.67
RFX3-202ENST00000358730 CPSF1Q10570 1443 aaKnown RBP10.85□□□□□ -0.67
RFX3-202ENST00000358730 NME9Q86XW9 330 aa10.85□□□□□ -0.67
RFX3-202ENST00000358730 WASLO00401 505 aaPredicted RBP10.84□□□□□ -0.67
RFX3-202ENST00000358730 CALD1Q05682 793 aaKnown RBP10.84□□□□□ -0.67
RFX3-202ENST00000358730 ZNF428Q96B54 188 aa10.84□□□□□ -0.67
RFX3-202ENST00000358730 C22orf23Q9BZE7 217 aa10.84□□□□□ -0.67
RFX3-202ENST00000358730 ANTXR1Q9H6X2 564 aa10.84□□□□□ -0.67
RFX3-202ENST00000358730 RTN4Q9NQC3 1192 aaKnown RBP10.84□□□□□ -0.67
RFX3-202ENST00000358730 BRPF3Q9ULD4 1205 aa10.84□□□□□ -0.67
RFX3-202ENST00000358730 METP08581 1390 aa10.84□□□□□ -0.67
RFX3-202ENST00000358730 MON2Q7Z3U7 1717 aa10.84□□□□□ -0.67
RFX3-202ENST00000358730 DLG5Q8TDM6 1919 aa10.83□□□□□ -0.68
RFX3-202ENST00000358730 ZRANB1Q9UGI0 708 aa10.83□□□□□ -0.68
RFX3-202ENST00000358730 ITSN1Q15811 1721 aa10.83□□□□□ -0.68
RFX3-202ENST00000358730 IL13P35225 146 aa10.83□□□□□ -0.68
RFX3-202ENST00000358730 NUCB1Q02818 461 aa10.83□□□□□ -0.68
RFX3-202ENST00000358730 TXNDC2Q86VQ3 553 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms