RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 TTC21AQ8NDW8 1320 aa17.59■□□□□ 0.41
NFIX-201ENST00000358552 PRR36Q9H6K5 1346 aa17.59■□□□□ 0.41
NFIX-201ENST00000358552 ADGRL3Q9HAR2 1447 aa17.58■□□□□ 0.41
NFIX-201ENST00000358552 NCOA3Q9Y6Q9 1424 aa17.58■□□□□ 0.41
NFIX-201ENST00000358552 COG3Q96JB2 828 aa17.58■□□□□ 0.41
NFIX-201ENST00000358552 KIF20BQ96Q89 1820 aa17.58■□□□□ 0.4
NFIX-201ENST00000358552 MON2Q7Z3U7 1717 aa17.57■□□□□ 0.4
NFIX-201ENST00000358552 FMN2Q9NZ56 1722 aa17.57■□□□□ 0.4
NFIX-201ENST00000358552 ZNF335Q9H4Z2 1342 aaPredicted RBP17.57■□□□□ 0.4
NFIX-201ENST00000358552 TOPAZ1Q8N9V7 1692 aa17.57■□□□□ 0.4
NFIX-201ENST00000358552 FKBP8Q14318 412 aa17.57■□□□□ 0.4
NFIX-201ENST00000358552 RBM33Q96EV2 1170 aaKnown RBP17.57■□□□□ 0.4
NFIX-201ENST00000358552 AKAP12Q02952 1782 aa17.57■□□□□ 0.4
NFIX-201ENST00000358552 ACEP12821 1306 aa17.57■□□□□ 0.4
NFIX-201ENST00000358552 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.55■□□□□ 0.4
NFIX-201ENST00000358552 TMEM94Q12767 1356 aa17.55■□□□□ 0.4
NFIX-201ENST00000358552 PNPLA6Q8IY17 1366 aa17.55■□□□□ 0.4
NFIX-201ENST00000358552 TNNT2P45379 298 aaPredicted RBP17.55■□□□□ 0.4
NFIX-201ENST00000358552 USP6P35125 1406 aa17.55■□□□□ 0.4
NFIX-201ENST00000358552 C14orf37Q86TY3 774 aa17.54■□□□□ 0.4
NFIX-201ENST00000358552 C19orf44Q9H6X5 657 aa17.54■□□□□ 0.4
NFIX-201ENST00000358552 TTC21BQ7Z4L5 1316 aa17.54■□□□□ 0.4
NFIX-201ENST00000358552 NGDNQ8NEJ9 315 aaKnown RBP17.53■□□□□ 0.4
NFIX-201ENST00000358552 RUNDC1Q96C34 613 aa17.53■□□□□ 0.4
NFIX-201ENST00000358552 LRRC7Q96NW7 1537 aa17.53■□□□□ 0.4
NFIX-201ENST00000358552 DCCP43146 1447 aa17.51■□□□□ 0.39
NFIX-201ENST00000358552 DIAPH1O60610 1272 aaKnown RBP17.5■□□□□ 0.39
NFIX-201ENST00000358552 SSH2Q76I76 1423 aa17.5■□□□□ 0.39
NFIX-201ENST00000358552 NUTM2FA1L443 756 aa17.5■□□□□ 0.39
NFIX-201ENST00000358552 USP31Q70CQ4 1352 aa17.49■□□□□ 0.39
NFIX-201ENST00000358552 GOLGA2Q08379 1002 aa17.48■□□□□ 0.39
NFIX-201ENST00000358552 CCDC27Q2M243 656 aa17.48■□□□□ 0.39
NFIX-201ENST00000358552 NME9Q86XW9 330 aa17.48■□□□□ 0.39
NFIX-201ENST00000358552 TSHZ2Q9NRE2 1034 aa17.48■□□□□ 0.39
NFIX-201ENST00000358552 POLKQ9UBT6 870 aa17.48■□□□□ 0.39
NFIX-201ENST00000358552 MSH6P52701 1360 aa17.48■□□□□ 0.39
NFIX-201ENST00000358552 NEFMP07197 916 aa17.47■□□□□ 0.39
NFIX-201ENST00000358552 U2AF1L5P0DN76 240 aaPredicted RBP17.47■□□□□ 0.39
NFIX-201ENST00000358552 U2AF1Q01081 240 aaKnown RBP eCLIP17.47■□□□□ 0.39
NFIX-201ENST00000358552 ZNF521Q96K83 1311 aa17.47■□□□□ 0.39
NFIX-201ENST00000358552 LTBP4Q8N2S1 1624 aa17.47■□□□□ 0.39
NFIX-201ENST00000358552 ATF3P18847 181 aa17.47■□□□□ 0.39
NFIX-201ENST00000358552 NRKQ7Z2Y5 1582 aa17.46■□□□□ 0.39
NFIX-201ENST00000358552 FCHSD2O94868 740 aa17.46■□□□□ 0.39
NFIX-201ENST00000358552 CADPS2Q86UW7 1296 aa17.46■□□□□ 0.39
NFIX-201ENST00000358552 PHF8Q9UPP1 1060 aa17.46■□□□□ 0.39
NFIX-201ENST00000358552 CDK12Q9NYV4 1490 aaPredicted RBP17.46■□□□□ 0.38
NFIX-201ENST00000358552 SHPRHQ149N8 1683 aa17.45■□□□□ 0.38
NFIX-201ENST00000358552 APAF1O14727 1248 aa17.45■□□□□ 0.38
NFIX-201ENST00000358552 OVOS2A0A0J9YW53 1432 aa17.45■□□□□ 0.38
NFIX-201ENST00000358552 OVOS2Q6IE36 1432 aa17.45■□□□□ 0.38
NFIX-201ENST00000358552 E9PSI1 815 aa17.44■□□□□ 0.38
NFIX-201ENST00000358552 PMFBP1Q8TBY8 1022 aa17.44■□□□□ 0.38
NFIX-201ENST00000358552 KIF24Q5T7B8 1368 aa17.44■□□□□ 0.38
NFIX-201ENST00000358552 COL3A1P02461 1466 aaPredicted RBP17.44■□□□□ 0.38
NFIX-201ENST00000358552 WDR63Q8IWG1 891 aa17.43■□□□□ 0.38
NFIX-201ENST00000358552 RNF123Q5XPI4 1314 aa17.43■□□□□ 0.38
NFIX-201ENST00000358552 MAPK8IP3Q9UPT6 1336 aa17.42■□□□□ 0.38
NFIX-201ENST00000358552 MAP2P11137 1827 aaKnown RBP17.42■□□□□ 0.38
NFIX-201ENST00000358552 U2SURPO15042 1029 aaKnown RBP17.41■□□□□ 0.38
NFIX-201ENST00000358552 SALL2Q9Y467 1007 aaPredicted RBP17.41■□□□□ 0.38
NFIX-201ENST00000358552 MST1RQ04912 1400 aa17.41■□□□□ 0.38
NFIX-201ENST00000358552 C1orf167Q5SNV9 1468 aa17.41■□□□□ 0.38
NFIX-201ENST00000358552 ESCO1Q5FWF5 840 aa17.41■□□□□ 0.38
NFIX-201ENST00000358552 CCDC146Q8IYE0 955 aa17.41■□□□□ 0.38
NFIX-201ENST00000358552 TCP11L2Q8N4U5 519 aa17.41■□□□□ 0.38
NFIX-201ENST00000358552 PHF23Q9BUL5 403 aaPredicted RBP17.4■□□□□ 0.38
NFIX-201ENST00000358552 KIF1AQ12756 1690 aa17.4■□□□□ 0.38
NFIX-201ENST00000358552 PSME1Q06323 249 aa17.39■□□□□ 0.37
NFIX-201ENST00000358552 SLFN5Q08AF3 891 aa17.39■□□□□ 0.37
NFIX-201ENST00000358552 TRMT2AQ8IZ69 625 aaKnown RBP17.39■□□□□ 0.37
NFIX-201ENST00000358552 RCAN3Q9UKA8 241 aa17.39■□□□□ 0.37
NFIX-201ENST00000358552 PPM1GO15355 546 aaPredicted RBP17.38■□□□□ 0.37
NFIX-201ENST00000358552 WWC1Q8IX03 1113 aa17.38■□□□□ 0.37
NFIX-201ENST00000358552 PLEKHF1Q96S99 279 aa17.38■□□□□ 0.37
NFIX-201ENST00000358552 ORAI2Q96SN7 254 aa17.38■□□□□ 0.37
NFIX-201ENST00000358552 IL13P35225 146 aa17.37■□□□□ 0.37
NFIX-201ENST00000358552 NLRP6P59044 892 aa17.37■□□□□ 0.37
NFIX-201ENST00000358552 USP54Q70EL1 1684 aa17.36■□□□□ 0.37
NFIX-201ENST00000358552 ABTB2Q8N961 1025 aa17.36■□□□□ 0.37
NFIX-201ENST00000358552 KCNH5Q8NCM2 988 aa17.36■□□□□ 0.37
NFIX-201ENST00000358552 IQSEC2Q5JU85 1478 aa17.36■□□□□ 0.37
NFIX-201ENST00000358552 DUSP27Q5VZP5 1158 aa17.35■□□□□ 0.37
NFIX-201ENST00000358552 SLAIN2Q9P270 581 aa17.35■□□□□ 0.37
NFIX-201ENST00000358552 EMILIN1Q9Y6C2 1016 aa17.35■□□□□ 0.37
NFIX-201ENST00000358552 SBNO1A3KN83 1393 aa17.35■□□□□ 0.37
NFIX-201ENST00000358552 CALD1Q05682 793 aaKnown RBP17.35■□□□□ 0.37
NFIX-201ENST00000358552 CDCA7LQ96GN5 454 aa17.35■□□□□ 0.37
NFIX-201ENST00000358552 ZRANB1Q9UGI0 708 aa17.35■□□□□ 0.37
NFIX-201ENST00000358552 FLT4P35916 1363 aa17.34■□□□□ 0.37
NFIX-201ENST00000358552 IL16Q14005 1332 aa17.34■□□□□ 0.37
NFIX-201ENST00000358552 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.34■□□□□ 0.37
NFIX-201ENST00000358552 MYH16Q9H6N6 1097 aa17.34■□□□□ 0.37
NFIX-201ENST00000358552 CT47B1P0C2W7 299 aaPredicted RBP17.33■□□□□ 0.36
NFIX-201ENST00000358552 TMPOP42166 694 aaKnown RBP17.33■□□□□ 0.36
NFIX-201ENST00000358552 LMOD3Q0VAK6 560 aa17.33■□□□□ 0.36
NFIX-201ENST00000358552 RRS1Q15050 365 aaKnown RBP17.33■□□□□ 0.36
NFIX-201ENST00000358552 FOXO3O43524 673 aa17.32■□□□□ 0.36
NFIX-201ENST00000358552 PAK3O75914 559 aaPredicted RBP17.32■□□□□ 0.36
NFIX-201ENST00000358552 RSPH6AQ9H0K4 717 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms