RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 PLEKHF1Q96S99 279 aa20.47■□□□□ 0.87
PHTF1-201ENST00000357783 METP08581 1390 aa20.47■□□□□ 0.87
PHTF1-201ENST00000357783 MAPK8IP3Q9UPT6 1336 aa20.46■□□□□ 0.87
PHTF1-201ENST00000357783 NCBP3Q53F19 620 aaKnown RBP20.46■□□□□ 0.87
PHTF1-201ENST00000357783 DIAPH1O60610 1272 aaKnown RBP20.45■□□□□ 0.86
PHTF1-201ENST00000357783 RGS3P49796 1198 aa20.45■□□□□ 0.86
PHTF1-201ENST00000357783 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.45■□□□□ 0.86
PHTF1-201ENST00000357783 ATP7BP35670 1465 aa20.45■□□□□ 0.86
PHTF1-201ENST00000357783 TMPOP42166 694 aaKnown RBP20.45■□□□□ 0.86
PHTF1-201ENST00000357783 TXNDC2Q86VQ3 553 aa20.45■□□□□ 0.86
PHTF1-201ENST00000357783 TSR2Q969E8 191 aaKnown RBP20.44■□□□□ 0.86
PHTF1-201ENST00000357783 TNNQ9UQP3 1299 aa20.44■□□□□ 0.86
PHTF1-201ENST00000357783 FBLN1P23142 703 aa20.44■□□□□ 0.86
PHTF1-201ENST00000357783 CLUAP1Q96AJ1 413 aa20.44■□□□□ 0.86
PHTF1-201ENST00000357783 IGHDP01880 384 aa20.43■□□□□ 0.86
PHTF1-201ENST00000357783 PPM1GO15355 546 aaPredicted RBP20.43■□□□□ 0.86
PHTF1-201ENST00000357783 WASLO00401 505 aaPredicted RBP20.42■□□□□ 0.86
PHTF1-201ENST00000357783 TRIM35Q9UPQ4 493 aa20.42■□□□□ 0.86
PHTF1-201ENST00000357783 PNPLA6Q8IY17 1366 aa20.42■□□□□ 0.86
PHTF1-201ENST00000357783 TNRQ92752 1358 aa20.42■□□□□ 0.86
PHTF1-201ENST00000357783 RLBP1P12271 317 aa20.41■□□□□ 0.86
PHTF1-201ENST00000357783 PPIP5K1Q6PFW1 1433 aa20.41■□□□□ 0.86
PHTF1-201ENST00000357783 MAP2P11137 1827 aaKnown RBP20.39■□□□□ 0.85
PHTF1-201ENST00000357783 POLKQ9UBT6 870 aa20.39■□□□□ 0.85
PHTF1-201ENST00000357783 RIPK4P57078 832 aa20.39■□□□□ 0.85
PHTF1-201ENST00000357783 NBR1Q14596 966 aa20.39■□□□□ 0.85
PHTF1-201ENST00000357783 FAM161AQ3B820 660 aa20.39■□□□□ 0.85
PHTF1-201ENST00000357783 EXOSC9Q06265 439 aaKnown RBP20.38■□□□□ 0.85
PHTF1-201ENST00000357783 NCKAP5LQ9HCH0 1330 aa20.37■□□□□ 0.85
PHTF1-201ENST00000357783 KNDC1Q76NI1 1749 aa20.37■□□□□ 0.85
PHTF1-201ENST00000357783 HDGFP51858 240 aaKnown RBP20.37■□□□□ 0.85
PHTF1-201ENST00000357783 LRRC7Q96NW7 1537 aa20.37■□□□□ 0.85
PHTF1-201ENST00000357783 C8orf34Q49A92 452 aa20.37■□□□□ 0.85
PHTF1-201ENST00000357783 NME9Q86XW9 330 aa20.37■□□□□ 0.85
PHTF1-201ENST00000357783 CPSF1Q10570 1443 aaKnown RBP20.37■□□□□ 0.85
PHTF1-201ENST00000357783 EDC4Q6P2E9 1401 aaKnown RBP20.37■□□□□ 0.85
PHTF1-201ENST00000357783 NUDT16Q96DE0 195 aaKnown RBP20.36■□□□□ 0.85
PHTF1-201ENST00000357783 UBR1Q8IWV7 1749 aa20.36■□□□□ 0.85
PHTF1-201ENST00000357783 PNNQ9H307 717 aaKnown RBP20.35■□□□□ 0.85
PHTF1-201ENST00000357783 ZRANB1Q9UGI0 708 aa20.35■□□□□ 0.85
PHTF1-201ENST00000357783 CDC42BPGQ6DT37 1551 aa20.35■□□□□ 0.85
PHTF1-201ENST00000357783 TMEM2Q9UHN6 1383 aa20.35■□□□□ 0.85
PHTF1-201ENST00000357783 FAM135BQ49AJ0 1406 aa20.34■□□□□ 0.85
PHTF1-201ENST00000357783 PRKAR2BP31323 418 aa20.34■□□□□ 0.85
PHTF1-201ENST00000357783 SMC4Q9NTJ3 1288 aa20.34■□□□□ 0.85
PHTF1-201ENST00000357783 EMILIN1Q9Y6C2 1016 aa20.34■□□□□ 0.85
PHTF1-201ENST00000357783 TECPR2O15040 1411 aa20.34■□□□□ 0.85
PHTF1-201ENST00000357783 FCHSD2O94868 740 aa20.33■□□□□ 0.85
PHTF1-201ENST00000357783 CPS1P31327 1500 aa20.33■□□□□ 0.85
PHTF1-201ENST00000357783 CT47B1P0C2W7 299 aaPredicted RBP20.33■□□□□ 0.85
PHTF1-201ENST00000357783 ZKSCAN2Q63HK3 967 aa20.33■□□□□ 0.85
PHTF1-201ENST00000357783 PCDHB15Q9Y5E8 787 aa20.33■□□□□ 0.85
PHTF1-201ENST00000357783 RSPH6AQ9H0K4 717 aa20.33■□□□□ 0.84
PHTF1-201ENST00000357783 IL16Q14005 1332 aa20.32■□□□□ 0.84
PHTF1-201ENST00000357783 CCDC61Q9Y6R9 512 aa20.32■□□□□ 0.84
PHTF1-201ENST00000357783 HMOX1P09601 288 aa20.32■□□□□ 0.84
PHTF1-201ENST00000357783 FTSJ3Q8IY81 847 aaKnown RBP20.32■□□□□ 0.84
PHTF1-201ENST00000357783 MON2Q7Z3U7 1717 aa20.31■□□□□ 0.84
PHTF1-201ENST00000357783 PMFBP1Q8TBY8 1022 aa20.31■□□□□ 0.84
PHTF1-201ENST00000357783 SSH1Q8WYL5 1049 aa20.31■□□□□ 0.84
PHTF1-201ENST00000357783 AAMPQ13685 434 aa20.3■□□□□ 0.84
PHTF1-201ENST00000357783 MVPQ14764 893 aaKnown RBP20.3■□□□□ 0.84
PHTF1-201ENST00000357783 SIRT1Q96EB6 747 aa20.3■□□□□ 0.84
PHTF1-201ENST00000357783 ROBO2Q9HCK4 1378 aa20.3■□□□□ 0.84
PHTF1-201ENST00000357783 NEFMP07197 916 aa20.3■□□□□ 0.84
PHTF1-201ENST00000357783 DZIP1LQ8IYY4 767 aaKnown RBP20.3■□□□□ 0.84
PHTF1-201ENST00000357783 ITSN1Q15811 1721 aa20.3■□□□□ 0.84
PHTF1-201ENST00000357783 DDRGK1Q96HY6 314 aa20.29■□□□□ 0.84
PHTF1-201ENST00000357783 PRR36Q9H6K5 1346 aa20.29■□□□□ 0.84
PHTF1-201ENST00000357783 AKAP12Q02952 1782 aa20.28■□□□□ 0.84
PHTF1-201ENST00000357783 ADAMTS13Q76LX8 1427 aa20.28■□□□□ 0.84
PHTF1-201ENST00000357783 COG3Q96JB2 828 aa20.28■□□□□ 0.84
PHTF1-201ENST00000357783 PHACTR3Q96KR7 559 aa20.28■□□□□ 0.84
PHTF1-201ENST00000357783 CDK12Q9NYV4 1490 aaPredicted RBP20.27■□□□□ 0.84
PHTF1-201ENST00000357783 CEBPAP49715 358 aaPredicted RBP20.27■□□□□ 0.84
PHTF1-201ENST00000357783 RRS1Q15050 365 aaKnown RBP20.27■□□□□ 0.84
PHTF1-201ENST00000357783 TRIM27P14373 513 aa20.26■□□□□ 0.83
PHTF1-201ENST00000357783 LTKP29376 864 aa20.26■□□□□ 0.83
PHTF1-201ENST00000357783 LAS1LQ9Y4W2 734 aaKnown RBP20.26■□□□□ 0.83
PHTF1-201ENST00000357783 VIRMAQ69YN4 1812 aaKnown RBP20.26■□□□□ 0.83
PHTF1-201ENST00000357783 IL13P35225 146 aa20.26■□□□□ 0.83
PHTF1-201ENST00000357783 C3P01024 1663 aa20.26■□□□□ 0.83
PHTF1-201ENST00000357783 PLPPR3Q6T4P5 718 aa20.25■□□□□ 0.83
PHTF1-201ENST00000357783 AATKQ6ZMQ8 1374 aa20.25■□□□□ 0.83
PHTF1-201ENST00000357783 NFE2L2Q16236 605 aa20.25■□□□□ 0.83
PHTF1-201ENST00000357783 THUMPD2Q9BTF0 503 aaKnown RBP20.25■□□□□ 0.83
PHTF1-201ENST00000357783 NOB1Q9ULX3 412 aaKnown RBP20.25■□□□□ 0.83
PHTF1-201ENST00000357783 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.24■□□□□ 0.83
PHTF1-201ENST00000357783 NUTM2FA1L443 756 aa20.24■□□□□ 0.83
PHTF1-201ENST00000357783 ATF7IPQ6VMQ6 1270 aa20.24■□□□□ 0.83
PHTF1-201ENST00000357783 RWDD1Q9H446 243 aaPredicted RBP20.24■□□□□ 0.83
PHTF1-201ENST00000357783 PLEKHG1Q9ULL1 1385 aa20.23■□□□□ 0.83
PHTF1-201ENST00000357783 ITPRIPQ8IWB1 547 aa20.23■□□□□ 0.83
PHTF1-201ENST00000357783 SLC26A8Q96RN1 970 aa20.22■□□□□ 0.83
PHTF1-201ENST00000357783 ZNF692Q9BU19 519 aaPredicted RBP20.22■□□□□ 0.83
PHTF1-201ENST00000357783 PDZRN3Q9UPQ7 1066 aa20.22■□□□□ 0.83
PHTF1-201ENST00000357783 SLC4A3P48751 1232 aa20.2■□□□□ 0.82
PHTF1-201ENST00000357783 RTL5Q5HYW3 569 aaPredicted RBP20.19■□□□□ 0.82
PHTF1-201ENST00000357783 DDX19BQ9UMR2 479 aa20.19■□□□□ 0.82
PHTF1-201ENST00000357783 KIF16BQ96L93 1317 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms