RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 NLRP6P59044 892 aa14.18□□□□□ -0.14
COL9A1-202ENST00000357250 RABEP1Q15276 862 aa14.18□□□□□ -0.14
COL9A1-202ENST00000357250 PDCP20941 246 aa14.18□□□□□ -0.14
COL9A1-202ENST00000357250 ZNF692Q9BU19 519 aaPredicted RBP14.18□□□□□ -0.14
COL9A1-202ENST00000357250 CDK19Q9BWU1 502 aa14.18□□□□□ -0.14
COL9A1-202ENST00000357250 ATP10BO94823 1461 aa14.18□□□□□ -0.14
COL9A1-202ENST00000357250 WAPLQ7Z5K2 1190 aa14.18□□□□□ -0.14
COL9A1-202ENST00000357250 RALYLQ86SE5 291 aaKnown RBP14.18□□□□□ -0.14
COL9A1-202ENST00000357250 APPP05067 770 aa14.17□□□□□ -0.14
COL9A1-202ENST00000357250 ERC1Q8IUD2 1116 aa14.17□□□□□ -0.14
COL9A1-202ENST00000357250 VPS37CA5D8V6 355 aaPredicted RBP14.17□□□□□ -0.14
COL9A1-202ENST00000357250 NFKBIBQ15653 356 aa14.17□□□□□ -0.14
COL9A1-202ENST00000357250 TSR2Q969E8 191 aaKnown RBP14.17□□□□□ -0.14
COL9A1-202ENST00000357250 SMG6Q86US8 1419 aaKnown RBP14.17□□□□□ -0.14
COL9A1-202ENST00000357250 RIC3Q7Z5B4 369 aa14.17□□□□□ -0.14
COL9A1-202ENST00000357250 GPRASP1Q5JY77 1395 aa14.16□□□□□ -0.14
COL9A1-202ENST00000357250 NAT10Q9H0A0 1025 aaKnown RBP14.16□□□□□ -0.14
COL9A1-202ENST00000357250 BCAR3O75815 825 aa14.16□□□□□ -0.14
COL9A1-202ENST00000357250 PRKAR2BP31323 418 aa14.16□□□□□ -0.14
COL9A1-202ENST00000357250 ADGRL1O94910 1474 aa14.16□□□□□ -0.14
COL9A1-202ENST00000357250 RBM33Q96EV2 1170 aaKnown RBP14.15□□□□□ -0.14
COL9A1-202ENST00000357250 CEBPAP49715 358 aaPredicted RBP14.15□□□□□ -0.14
COL9A1-202ENST00000357250 IDI1Q13907 227 aa14.15□□□□□ -0.14
COL9A1-202ENST00000357250 VPS53Q5VIR6 699 aa14.15□□□□□ -0.14
COL9A1-202ENST00000357250 VPS37DQ86XT2 251 aa14.15□□□□□ -0.14
COL9A1-202ENST00000357250 FAM43AQ8N2R8 423 aa14.15□□□□□ -0.14
COL9A1-202ENST00000357250 MAPKBP1O60336 1514 aa14.14□□□□□ -0.15
COL9A1-202ENST00000357250 PLEKHO1Q53GL0 409 aaPredicted RBP14.14□□□□□ -0.15
COL9A1-202ENST00000357250 KIF14Q15058 1648 aa14.14□□□□□ -0.15
COL9A1-202ENST00000357250 ATF3P18847 181 aa14.14□□□□□ -0.15
COL9A1-202ENST00000357250 DHX8Q14562 1220 aaKnown RBP14.14□□□□□ -0.15
COL9A1-202ENST00000357250 FOXD4L6Q3SYB3 417 aaPredicted RBP14.14□□□□□ -0.15
COL9A1-202ENST00000357250 FOXD4L3Q6VB84 417 aaPredicted RBP14.14□□□□□ -0.15
COL9A1-202ENST00000357250 NFXL1Q6ZNB6 911 aa14.14□□□□□ -0.15
COL9A1-202ENST00000357250 MTERF4Q7Z6M4 381 aaKnown RBP14.14□□□□□ -0.15
COL9A1-202ENST00000357250 CCDC39Q9UFE4 941 aa14.14□□□□□ -0.15
COL9A1-202ENST00000357250 XBP1P17861 261 aa14.13□□□□□ -0.15
COL9A1-202ENST00000357250 TWISTNBQ3B726 338 aaPredicted RBP14.13□□□□□ -0.15
COL9A1-202ENST00000357250 ATAD2Q6PL18 1390 aa14.13□□□□□ -0.15
COL9A1-202ENST00000357250 CCT4P50991 539 aaKnown RBP14.13□□□□□ -0.15
COL9A1-202ENST00000357250 TRIM34Q9BYJ4 488 aa14.13□□□□□ -0.15
COL9A1-202ENST00000357250 CWC22Q9HCG8 908 aaKnown RBP14.13□□□□□ -0.15
COL9A1-202ENST00000357250 EXOSC9Q06265 439 aaKnown RBP14.13□□□□□ -0.15
COL9A1-202ENST00000357250 ARID3AQ99856 593 aa14.13□□□□□ -0.15
COL9A1-202ENST00000357250 RRS1Q15050 365 aaKnown RBP14.13□□□□□ -0.15
COL9A1-202ENST00000357250 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.13□□□□□ -0.15
COL9A1-202ENST00000357250 PDZRN3Q9UPQ7 1066 aa14.13□□□□□ -0.15
COL9A1-202ENST00000357250 GNAI2P04899 355 aa14.12□□□□□ -0.15
COL9A1-202ENST00000357250 PDIA4P13667 645 aaKnown RBP14.12□□□□□ -0.15
COL9A1-202ENST00000357250 BRMS1Q9HCU9 246 aa14.12□□□□□ -0.15
COL9A1-202ENST00000357250 TEX35Q5T0J7 233 aa14.11□□□□□ -0.15
COL9A1-202ENST00000357250 ARGLU1Q9NWB6 273 aaPredicted RBP14.11□□□□□ -0.15
COL9A1-202ENST00000357250 HOMER1Q86YM7 354 aa14.11□□□□□ -0.15
COL9A1-202ENST00000357250 MAP7D2Q96T17 732 aa14.11□□□□□ -0.15
COL9A1-202ENST00000357250 RPRD2Q5VT52 1461 aaKnown RBP14.11□□□□□ -0.15
COL9A1-202ENST00000357250 ABTB2Q8N961 1025 aa14.11□□□□□ -0.15
COL9A1-202ENST00000357250 DHX16O60231 1041 aaKnown RBP14.11□□□□□ -0.15
COL9A1-202ENST00000357250 SETQ01105 290 aaPredicted RBP14.11□□□□□ -0.15
COL9A1-202ENST00000357250 SURF6O75683 361 aaKnown RBP14.1□□□□□ -0.15
COL9A1-202ENST00000357250 ESCO1Q5FWF5 840 aa14.1□□□□□ -0.15
COL9A1-202ENST00000357250 CCAR2Q8N163 923 aaKnown RBP14.1□□□□□ -0.15
COL9A1-202ENST00000357250 KIF21AQ7Z4S6 1674 aa14.1□□□□□ -0.15
COL9A1-202ENST00000357250 NASPP49321 788 aaPredicted RBP14.1□□□□□ -0.15
COL9A1-202ENST00000357250 ACBD3Q9H3P7 528 aa14.1□□□□□ -0.15
COL9A1-202ENST00000357250 ANO8Q9HCE9 1232 aaPredicted RBP14.1□□□□□ -0.15
COL9A1-202ENST00000357250 XPCQ01831 940 aaPredicted RBP14.1□□□□□ -0.15
COL9A1-202ENST00000357250 SART3Q15020 963 aaKnown RBP14.1□□□□□ -0.15
COL9A1-202ENST00000357250 SRCIN1Q9C0H9 1055 aa14.1□□□□□ -0.15
COL9A1-202ENST00000357250 NLRP2Q9NX02 1062 aa14.1□□□□□ -0.15
COL9A1-202ENST00000357250 FSD1Q9BTV5 496 aa14.1□□□□□ -0.15
COL9A1-202ENST00000357250 UGGT2Q9NYU1 1516 aa14.1□□□□□ -0.15
COL9A1-202ENST00000357250 FANCAO15360 1455 aa14.09□□□□□ -0.15
COL9A1-202ENST00000357250 TRAK2O60296 914 aa14.09□□□□□ -0.15
COL9A1-202ENST00000357250 SKAP1Q86WV1 359 aa14.09□□□□□ -0.15
COL9A1-202ENST00000357250 TBC1D2BQ9UPU7 963 aa14.09□□□□□ -0.15
COL9A1-202ENST00000357250 OLFM4Q6UX06 510 aa14.09□□□□□ -0.15
COL9A1-202ENST00000357250 PCMTD1Q96MG8 357 aaPredicted RBP14.09□□□□□ -0.15
COL9A1-202ENST00000357250 NEUROD6Q96NK8 337 aa14.09□□□□□ -0.15
COL9A1-202ENST00000357250 CIZ1Q9ULV3 898 aaPredicted RBP14.09□□□□□ -0.15
COL9A1-202ENST00000357250 ATF7IPQ6VMQ6 1270 aa14.09□□□□□ -0.15
COL9A1-202ENST00000357250 BACH2Q9BYV9 841 aa14.09□□□□□ -0.15
COL9A1-202ENST00000357250 TCEAL9Q9UHQ7 104 aa14.09□□□□□ -0.15
COL9A1-202ENST00000357250 ANKRD1Q15327 319 aa14.08□□□□□ -0.16
COL9A1-202ENST00000357250 WASHC4Q2M389 1173 aa14.08□□□□□ -0.16
COL9A1-202ENST00000357250 FBLN1P23142 703 aa14.08□□□□□ -0.16
COL9A1-202ENST00000357250 SULT6B1Q6IMI4 303 aa14.08□□□□□ -0.16
COL9A1-202ENST00000357250 RAPGEF6Q8TEU7 1601 aa14.08□□□□□ -0.16
COL9A1-202ENST00000357250 ZNF592Q92610 1267 aa14.07□□□□□ -0.16
COL9A1-202ENST00000357250 MVPQ14764 893 aaKnown RBP14.07□□□□□ -0.16
COL9A1-202ENST00000357250 NEK4P51957 841 aa14.07□□□□□ -0.16
COL9A1-202ENST00000357250 AEBP1Q8IUX7 1158 aa14.07□□□□□ -0.16
COL9A1-202ENST00000357250 SDF4Q9BRK5 362 aa14.07□□□□□ -0.16
COL9A1-202ENST00000357250 THUMPD2Q9BTF0 503 aaKnown RBP14.07□□□□□ -0.16
COL9A1-202ENST00000357250 CCP110O43303 1012 aa14.07□□□□□ -0.16
COL9A1-202ENST00000357250 FCHSD2O94868 740 aa14.07□□□□□ -0.16
COL9A1-202ENST00000357250 CDR1P51861 262 aa14.07□□□□□ -0.16
COL9A1-202ENST00000357250 CTDP1Q9Y5B0 961 aaPredicted RBP14.07□□□□□ -0.16
COL9A1-202ENST00000357250 THEMISQ8N1K5 641 aaPredicted RBP14.06□□□□□ -0.16
COL9A1-202ENST00000357250 ZNF396Q96N95 335 aaPredicted RBP14.06□□□□□ -0.16
COL9A1-202ENST00000357250 C1orf115Q9H7X2 142 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms