RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 MYO5BQ9ULV0 1848 aa19.47■□□□□ 0.71
PTBP1-203ENST00000356948 NLRP1Q9C000 1473 aa19.46■□□□□ 0.71
PTBP1-203ENST00000356948 MYH16Q9H6N6 1097 aa19.46■□□□□ 0.71
PTBP1-203ENST00000356948 ZKSCAN2Q63HK3 967 aa19.46■□□□□ 0.71
PTBP1-203ENST00000356948 TMEM57Q8N5G2 664 aa19.45■□□□□ 0.7
PTBP1-203ENST00000356948 PHACTR3Q96KR7 559 aa19.45■□□□□ 0.7
PTBP1-203ENST00000356948 CYB5RLQ6IPT4 315 aa19.45■□□□□ 0.7
PTBP1-203ENST00000356948 CCDC27Q2M243 656 aa19.45■□□□□ 0.7
PTBP1-203ENST00000356948 NGEFQ8N5V2 710 aa19.44■□□□□ 0.7
PTBP1-203ENST00000356948 C1orf115Q9H7X2 142 aa19.44■□□□□ 0.7
PTBP1-203ENST00000356948 CD163L1Q9NR16 1453 aa19.43■□□□□ 0.7
PTBP1-203ENST00000356948 PMFBP1Q8TBY8 1022 aa19.43■□□□□ 0.7
PTBP1-203ENST00000356948 PIK3C2BO00750 1634 aa19.43■□□□□ 0.7
PTBP1-203ENST00000356948 MAPK8IP3Q9UPT6 1336 aa19.43■□□□□ 0.7
PTBP1-203ENST00000356948 ABCC11Q96J66 1382 aa19.43■□□□□ 0.7
PTBP1-203ENST00000356948 STAG3Q9UJ98 1225 aa19.43■□□□□ 0.7
PTBP1-203ENST00000356948 MFAP1P55081 439 aaKnown RBP19.42■□□□□ 0.7
PTBP1-203ENST00000356948 UBE2Q2Q8WVN8 375 aa19.42■□□□□ 0.7
PTBP1-203ENST00000356948 EMILIN1Q9Y6C2 1016 aa19.42■□□□□ 0.7
PTBP1-203ENST00000356948 TSPYL6Q8N831 410 aa19.41■□□□□ 0.7
PTBP1-203ENST00000356948 TBC1D2Q9BYX2 928 aa19.41■□□□□ 0.7
PTBP1-203ENST00000356948 PRKAR2BP31323 418 aa19.41■□□□□ 0.7
PTBP1-203ENST00000356948 RWDD1Q9H446 243 aaPredicted RBP19.41■□□□□ 0.7
PTBP1-203ENST00000356948 DIP2CQ9Y2E4 1556 aa19.4■□□□□ 0.7
PTBP1-203ENST00000356948 PTPRMP28827 1452 aa19.4■□□□□ 0.7
PTBP1-203ENST00000356948 DIAPH1O60610 1272 aaKnown RBP19.4■□□□□ 0.7
PTBP1-203ENST00000356948 ATF7IPQ6VMQ6 1270 aa19.39■□□□□ 0.69
PTBP1-203ENST00000356948 TBC1D32Q96NH3 1257 aa19.38■□□□□ 0.69
PTBP1-203ENST00000356948 YTHDC2Q9H6S0 1430 aaKnown RBP19.38■□□□□ 0.69
PTBP1-203ENST00000356948 COL3A1P02461 1466 aaPredicted RBP19.38■□□□□ 0.69
PTBP1-203ENST00000356948 LNPKQ9C0E8 428 aa19.38■□□□□ 0.69
PTBP1-203ENST00000356948 POLKQ9UBT6 870 aa19.38■□□□□ 0.69
PTBP1-203ENST00000356948 FAM83GA6ND36 823 aa19.37■□□□□ 0.69
PTBP1-203ENST00000356948 DCTN1Q14203 1278 aa19.37■□□□□ 0.69
PTBP1-203ENST00000356948 NME9Q86XW9 330 aa19.37■□□□□ 0.69
PTBP1-203ENST00000356948 NUTM2FA1L443 756 aa19.37■□□□□ 0.69
PTBP1-203ENST00000356948 TERF2IPQ9NYB0 399 aa19.37■□□□□ 0.69
PTBP1-203ENST00000356948 RRS1Q15050 365 aaKnown RBP19.37■□□□□ 0.69
PTBP1-203ENST00000356948 VSIG10Q8N0Z9 540 aa19.37■□□□□ 0.69
PTBP1-203ENST00000356948 NINLQ9Y2I6 1382 aa19.36■□□□□ 0.69
PTBP1-203ENST00000356948 SLC52A1Q9NWF4 448 aa19.36■□□□□ 0.69
PTBP1-203ENST00000356948 ANTXR1Q9H6X2 564 aa19.35■□□□□ 0.69
PTBP1-203ENST00000356948 ATAD2Q6PL18 1390 aa19.35■□□□□ 0.69
PTBP1-203ENST00000356948 ADGRB2O60241 1585 aa19.34■□□□□ 0.69
PTBP1-203ENST00000356948 TXNDC2Q86VQ3 553 aa19.34■□□□□ 0.69
PTBP1-203ENST00000356948 USP32Q8NFA0 1604 aa19.33■□□□□ 0.69
PTBP1-203ENST00000356948 GLIPR1L2Q4G1C9 344 aa19.33■□□□□ 0.68
PTBP1-203ENST00000356948 NAP1L5Q96NT1 182 aaPredicted RBP19.33■□□□□ 0.68
PTBP1-203ENST00000356948 RSPH6AQ9H0K4 717 aa19.33■□□□□ 0.68
PTBP1-203ENST00000356948 HDGFL2Q7Z4V5 671 aaPredicted RBP19.32■□□□□ 0.68
PTBP1-203ENST00000356948 ZBTB40Q9NUA8 1239 aa19.32■□□□□ 0.68
PTBP1-203ENST00000356948 NSD2O96028 1365 aa19.32■□□□□ 0.68
PTBP1-203ENST00000356948 VIRMAQ69YN4 1812 aaKnown RBP19.32■□□□□ 0.68
PTBP1-203ENST00000356948 PKNOX2Q96KN3 472 aa19.32■□□□□ 0.68
PTBP1-203ENST00000356948 FAM69CQ0P6D2 419 aa19.31■□□□□ 0.68
PTBP1-203ENST00000356948 KRT24Q2M2I5 525 aa19.31■□□□□ 0.68
PTBP1-203ENST00000356948 GZF1Q9H116 711 aaPredicted RBP19.31■□□□□ 0.68
PTBP1-203ENST00000356948 SOX12O15370 315 aa19.31■□□□□ 0.68
PTBP1-203ENST00000356948 TMEM131LA2VDJ0 1609 aa19.3■□□□□ 0.68
PTBP1-203ENST00000356948 C22orf23Q9BZE7 217 aa19.29■□□□□ 0.68
PTBP1-203ENST00000356948 PUS7Q96PZ0 661 aaKnown RBP19.29■□□□□ 0.68
PTBP1-203ENST00000356948 DDX19BQ9UMR2 479 aa19.29■□□□□ 0.68
PTBP1-203ENST00000356948 UPF2Q9HAU5 1272 aaKnown RBP19.28■□□□□ 0.68
PTBP1-203ENST00000356948 BECN1Q14457 450 aa19.27■□□□□ 0.68
PTBP1-203ENST00000356948 LRRC7Q96NW7 1537 aa19.27■□□□□ 0.68
PTBP1-203ENST00000356948 C8orf58Q8NAV2 365 aa19.27■□□□□ 0.68
PTBP1-203ENST00000356948 FOXD4L1Q9NU39 408 aa19.27■□□□□ 0.68
PTBP1-203ENST00000356948 ALKQ9UM73 1620 aa19.27■□□□□ 0.68
PTBP1-203ENST00000356948 ARHGEF40Q8TER5 1519 aa19.27■□□□□ 0.67
PTBP1-203ENST00000356948 RICTORQ6R327 1708 aa19.26■□□□□ 0.67
PTBP1-203ENST00000356948 AEBP1Q8IUX7 1158 aa19.26■□□□□ 0.67
PTBP1-203ENST00000356948 VAMP4O75379 141 aa19.26■□□□□ 0.67
PTBP1-203ENST00000356948 HDAC1Q13547 482 aaPredicted RBP19.26■□□□□ 0.67
PTBP1-203ENST00000356948 SIRT2Q8IXJ6 389 aa19.26■□□□□ 0.67
PTBP1-203ENST00000356948 MBIPQ9NS73 344 aa19.26■□□□□ 0.67
PTBP1-203ENST00000356948 ARHGAP31Q2M1Z3 1444 aa19.25■□□□□ 0.67
PTBP1-203ENST00000356948 PREX1Q8TCU6 1659 aa19.25■□□□□ 0.67
PTBP1-203ENST00000356948 NEO1Q92859 1461 aa19.25■□□□□ 0.67
PTBP1-203ENST00000356948 SMC5Q8IY18 1101 aa19.25■□□□□ 0.67
PTBP1-203ENST00000356948 PNPLA6Q8IY17 1366 aa19.25■□□□□ 0.67
PTBP1-203ENST00000356948 ANKRD45Q5TZF3 282 aa19.25■□□□□ 0.67
PTBP1-203ENST00000356948 CFAP74Q9C0B2 1584 aa19.24■□□□□ 0.67
PTBP1-203ENST00000356948 PLPPR3Q6T4P5 718 aa19.24■□□□□ 0.67
PTBP1-203ENST00000356948 METP08581 1390 aa19.24■□□□□ 0.67
PTBP1-203ENST00000356948 FCHSD2O94868 740 aa19.23■□□□□ 0.67
PTBP1-203ENST00000356948 RBM42Q9BTD8 480 aaKnown RBP19.23■□□□□ 0.67
PTBP1-203ENST00000356948 ZBTB7BO15156 539 aaPredicted RBP19.22■□□□□ 0.67
PTBP1-203ENST00000356948 CD2BP2O95400 341 aaKnown RBP19.22■□□□□ 0.67
PTBP1-203ENST00000356948 ZFYVE9O95405 1425 aa19.22■□□□□ 0.67
PTBP1-203ENST00000356948 IL13P35225 146 aa19.22■□□□□ 0.67
PTBP1-203ENST00000356948 TSPOAP1O95153 1857 aa19.21■□□□□ 0.67
PTBP1-203ENST00000356948 MRPL50Q8N5N7 158 aaKnown RBP19.21■□□□□ 0.67
PTBP1-203ENST00000356948 NUCB1Q02818 461 aa19.21■□□□□ 0.66
PTBP1-203ENST00000356948 NFE2L2Q16236 605 aa19.21■□□□□ 0.66
PTBP1-203ENST00000356948 PPIP5K1Q6PFW1 1433 aa19.2■□□□□ 0.66
PTBP1-203ENST00000356948 CHD1LQ86WJ1 897 aa19.2■□□□□ 0.66
PTBP1-203ENST00000356948 APBB1O00213 710 aa19.2■□□□□ 0.66
PTBP1-203ENST00000356948 MIS18AQ9NYP9 233 aa19.2■□□□□ 0.66
PTBP1-203ENST00000356948 C16orf71Q8IYS4 520 aaPredicted RBP19.19■□□□□ 0.66
PTBP1-203ENST00000356948 FAM135BQ49AJ0 1406 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms