RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 EVC2Q86UK5 1308 aa15.35■□□□□ 0.05
BDNF-202ENST00000356660 ADGRF5Q8IZF2 1346 aa15.35■□□□□ 0.05
BDNF-202ENST00000356660 ERBB4Q15303 1308 aa15.35■□□□□ 0.05
BDNF-202ENST00000356660 CCDC141Q6ZP82 1450 aa15.35■□□□□ 0.05
BDNF-202ENST00000356660 MAGI2Q86UL8 1455 aa15.35■□□□□ 0.05
BDNF-202ENST00000356660 DRC7Q8IY82 874 aa15.34■□□□□ 0.05
BDNF-202ENST00000356660 CFAP44Q96MT7 982 aa15.34■□□□□ 0.05
BDNF-202ENST00000356660 FAM135AQ9P2D6 1515 aa15.34■□□□□ 0.05
BDNF-202ENST00000356660 ZNF608Q9ULD9 1512 aaPredicted RBP15.34■□□□□ 0.05
BDNF-202ENST00000356660 NEK4P51957 841 aa15.34■□□□□ 0.05
BDNF-202ENST00000356660 RABEP1Q15276 862 aa15.33■□□□□ 0.05
BDNF-202ENST00000356660 INTS3Q68E01 1043 aaKnown RBP15.33■□□□□ 0.05
BDNF-202ENST00000356660 NECTIN2Q92692 538 aa15.33■□□□□ 0.04
BDNF-202ENST00000356660 MAP7D2Q96T17 732 aa15.33■□□□□ 0.04
BDNF-202ENST00000356660 RAB3GAP1Q15042 981 aa15.33■□□□□ 0.04
BDNF-202ENST00000356660 OSCARQ8IYS5 282 aa15.33■□□□□ 0.04
BDNF-202ENST00000356660 PRKAR2BP31323 418 aa15.33■□□□□ 0.04
BDNF-202ENST00000356660 CCDC39Q9UFE4 941 aa15.32■□□□□ 0.04
BDNF-202ENST00000356660 PIK3C2GO75747 1445 aa15.32■□□□□ 0.04
BDNF-202ENST00000356660 GCC1Q96CN9 775 aa15.32■□□□□ 0.04
BDNF-202ENST00000356660 LRRIQ1Q96JM4 1722 aa15.32■□□□□ 0.04
BDNF-202ENST00000356660 KLHL34Q8N239 644 aa15.32■□□□□ 0.04
BDNF-202ENST00000356660 STK31Q9BXU1 1019 aa15.32■□□□□ 0.04
BDNF-202ENST00000356660 CHMP3Q9Y3E7 222 aa15.32■□□□□ 0.04
BDNF-202ENST00000356660 RAPGEF6Q8TEU7 1601 aa15.32■□□□□ 0.04
BDNF-202ENST00000356660 REC8O95072 547 aa15.31■□□□□ 0.04
BDNF-202ENST00000356660 KLHL40Q2TBA0 621 aa15.31■□□□□ 0.04
BDNF-202ENST00000356660 STAC3Q96MF2 364 aa15.31■□□□□ 0.04
BDNF-202ENST00000356660 ZHX1Q9UKY1 873 aaPredicted RBP15.31■□□□□ 0.04
BDNF-202ENST00000356660 HDAC1Q13547 482 aaPredicted RBP15.31■□□□□ 0.04
BDNF-202ENST00000356660 ANO2Q9NQ90 1003 aa15.31■□□□□ 0.04
BDNF-202ENST00000356660 SCAF11Q99590 1463 aaKnown RBP15.31■□□□□ 0.04
BDNF-202ENST00000356660 SMC5Q8IY18 1101 aa15.31■□□□□ 0.04
BDNF-202ENST00000356660 INSRP06213 1382 aa15.3■□□□□ 0.04
BDNF-202ENST00000356660 CSB-PGBD3P0DP91 1061 aa15.3■□□□□ 0.04
BDNF-202ENST00000356660 ZSCAN23Q3MJ62 389 aa15.3■□□□□ 0.04
BDNF-202ENST00000356660 PRIM1P49642 420 aaKnown RBP15.29■□□□□ 0.04
BDNF-202ENST00000356660 NUCB1Q02818 461 aa15.29■□□□□ 0.04
BDNF-202ENST00000356660 BMP2KLQ5H9B9 411 aa15.29■□□□□ 0.04
BDNF-202ENST00000356660 SCAPERQ9BY12 1400 aa15.29■□□□□ 0.04
BDNF-202ENST00000356660 ADGRL2O95490 1459 aa15.29■□□□□ 0.04
BDNF-202ENST00000356660 SYNJ2O15056 1496 aa15.28■□□□□ 0.04
BDNF-202ENST00000356660 SNX21Q969T3 373 aa15.28■□□□□ 0.04
BDNF-202ENST00000356660 OFD1O75665 1012 aa15.28■□□□□ 0.04
BDNF-202ENST00000356660 CT47B1P0C2W7 299 aaPredicted RBP15.28■□□□□ 0.04
BDNF-202ENST00000356660 GOLGA6L4A6NEF3 574 aa15.28■□□□□ 0.04
BDNF-202ENST00000356660 SMARCA5O60264 1052 aaPredicted RBP15.27■□□□□ 0.04
BDNF-202ENST00000356660 PHF14O94880 888 aa15.27■□□□□ 0.04
BDNF-202ENST00000356660 COG3Q96JB2 828 aa15.27■□□□□ 0.04
BDNF-202ENST00000356660 API5Q9BZZ5 524 aaKnown RBP15.27■□□□□ 0.04
BDNF-202ENST00000356660 FAM69CQ0P6D2 419 aa15.27■□□□□ 0.04
BDNF-202ENST00000356660 GDPD2Q9HCC8 539 aa15.27■□□□□ 0.04
BDNF-202ENST00000356660 CD2BP2O95400 341 aaKnown RBP15.27■□□□□ 0.03
BDNF-202ENST00000356660 EID1Q9Y6B2 187 aa15.27■□□□□ 0.03
BDNF-202ENST00000356660 FBLN1P23142 703 aa15.26■□□□□ 0.03
BDNF-202ENST00000356660 TWISTNBQ3B726 338 aaPredicted RBP15.26■□□□□ 0.03
BDNF-202ENST00000356660 HMMRO75330 724 aa15.26■□□□□ 0.03
BDNF-202ENST00000356660 TSPY26PQ9H489 355 aa15.26■□□□□ 0.03
BDNF-202ENST00000356660 RAPGEF3O95398 923 aa15.25■□□□□ 0.03
BDNF-202ENST00000356660 ZBTB40Q9NUA8 1239 aa15.25■□□□□ 0.03
BDNF-202ENST00000356660 DISP1Q96F81 1524 aa15.25■□□□□ 0.03
BDNF-202ENST00000356660 NUTM2GQ5VZR2 741 aa15.25■□□□□ 0.03
BDNF-202ENST00000356660 CHAMP1Q96JM3 812 aa15.25■□□□□ 0.03
BDNF-202ENST00000356660 ZNF830Q96NB3 372 aaPredicted RBP15.25■□□□□ 0.03
BDNF-202ENST00000356660 RBSNQ9H1K0 784 aa15.25■□□□□ 0.03
BDNF-202ENST00000356660 GRIN2AQ12879 1464 aa15.25■□□□□ 0.03
BDNF-202ENST00000356660 RBM25P49756 843 aaKnown RBP15.25■□□□□ 0.03
BDNF-202ENST00000356660 CBX1P83916 185 aa15.25■□□□□ 0.03
BDNF-202ENST00000356660 ZGPATQ8N5A5 531 aaKnown RBP15.25■□□□□ 0.03
BDNF-202ENST00000356660 MBD3O95983 291 aa15.24■□□□□ 0.03
BDNF-202ENST00000356660 ZRSR1Q15695 479 aaKnown RBP15.24■□□□□ 0.03
BDNF-202ENST00000356660 ATP10BO94823 1461 aa15.24■□□□□ 0.03
BDNF-202ENST00000356660 GNAI1P63096 354 aa15.24■□□□□ 0.03
BDNF-202ENST00000356660 CCDC27Q2M243 656 aa15.24■□□□□ 0.03
BDNF-202ENST00000356660 C16orf71Q8IYS4 520 aaPredicted RBP15.24■□□□□ 0.03
BDNF-202ENST00000356660 POLR3AO14802 1390 aaPredicted RBP15.24■□□□□ 0.03
BDNF-202ENST00000356660 MTERF4Q7Z6M4 381 aaKnown RBP15.24■□□□□ 0.03
BDNF-202ENST00000356660 ITSN2Q9NZM3 1697 aa15.23■□□□□ 0.03
BDNF-202ENST00000356660 CCDC9Q9Y3X0 531 aaKnown RBP15.23■□□□□ 0.03
BDNF-202ENST00000356660 CWC22Q9HCG8 908 aaKnown RBP15.23■□□□□ 0.03
BDNF-202ENST00000356660 MAPK8IP2Q13387 824 aaPredicted RBP15.23■□□□□ 0.03
BDNF-202ENST00000356660 SPC24Q8NBT2 197 aa15.23■□□□□ 0.03
BDNF-202ENST00000356660 KIAA0556O60303 1618 aa15.22■□□□□ 0.03
BDNF-202ENST00000356660 POLR1AO95602 1720 aaPredicted RBP15.22■□□□□ 0.03
BDNF-202ENST00000356660 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.22■□□□□ 0.03
BDNF-202ENST00000356660 FAM177BA6PVY3 158 aa15.22■□□□□ 0.03
BDNF-202ENST00000356660 EIF2S2P20042 333 aaKnown RBP15.22■□□□□ 0.03
BDNF-202ENST00000356660 WDR7Q9Y4E6 1490 aa15.22■□□□□ 0.03
BDNF-202ENST00000356660 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.22■□□□□ 0.03
BDNF-202ENST00000356660 UPF3BQ9BZI7 483 aaKnown RBP15.22■□□□□ 0.03
BDNF-202ENST00000356660 PKP1Q13835 747 aa15.21■□□□□ 0.03
BDNF-202ENST00000356660 DCTN1Q14203 1278 aa15.21■□□□□ 0.03
BDNF-202ENST00000356660 PLCD3Q8N3E9 789 aa15.21■□□□□ 0.03
BDNF-202ENST00000356660 FIBPO43427 364 aa15.21■□□□□ 0.03
BDNF-202ENST00000356660 SASS6Q6UVJ0 657 aa15.21■□□□□ 0.03
BDNF-202ENST00000356660 ZNF771Q7L3S4 317 aaPredicted RBP15.21■□□□□ 0.02
BDNF-202ENST00000356660 ZNF592Q92610 1267 aa15.21■□□□□ 0.02
BDNF-202ENST00000356660 USP25Q9UHP3 1055 aa15.21■□□□□ 0.02
BDNF-202ENST00000356660 ZKSCAN5Q9Y2L8 839 aa15.21■□□□□ 0.02
BDNF-202ENST00000356660 APPP05067 770 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms