RNA–Protein interactions for RNA: ENST00000356654.8

ATN1-201, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,351 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-201ENST00000356654 FOXO3O43524 673 aa17.24■□□□□ 0.35
ATN1-201ENST00000356654 MVPQ14764 893 aaKnown RBP17.24■□□□□ 0.35
ATN1-201ENST00000356654 DUOX2Q9NRD8 1548 aa17.24■□□□□ 0.35
ATN1-201ENST00000356654 SURF6O75683 361 aaKnown RBP17.24■□□□□ 0.35
ATN1-201ENST00000356654 TOMM22Q9NS69 142 aa17.24■□□□□ 0.35
ATN1-201ENST00000356654 GNAI3P08754 354 aa17.22■□□□□ 0.35
ATN1-201ENST00000356654 SSH1Q8WYL5 1049 aa17.22■□□□□ 0.35
ATN1-201ENST00000356654 DUSP27Q5VZP5 1158 aa17.22■□□□□ 0.35
ATN1-201ENST00000356654 PZPP20742 1482 aa17.22■□□□□ 0.35
ATN1-201ENST00000356654 CT47B1P0C2W7 299 aaPredicted RBP17.21■□□□□ 0.35
ATN1-201ENST00000356654 RARSP54136 660 aaKnown RBP17.21■□□□□ 0.35
ATN1-201ENST00000356654 RALGAPBQ86X10 1494 aa17.21■□□□□ 0.35
ATN1-201ENST00000356654 PPP6R1Q9UPN7 881 aa17.21■□□□□ 0.35
ATN1-201ENST00000356654 TMEM57Q8N5G2 664 aa17.21■□□□□ 0.34
ATN1-201ENST00000356654 TATP17735 454 aaPredicted RBP17.2■□□□□ 0.34
ATN1-201ENST00000356654 BACH2Q9BYV9 841 aa17.2■□□□□ 0.34
ATN1-201ENST00000356654 NAP1L5Q96NT1 182 aaPredicted RBP17.2■□□□□ 0.34
ATN1-201ENST00000356654 ITSN2Q9NZM3 1697 aa17.2■□□□□ 0.34
ATN1-201ENST00000356654 MAGI3Q5TCQ9 1506 aa17.2■□□□□ 0.34
ATN1-201ENST00000356654 INTS3Q68E01 1043 aaKnown RBP17.19■□□□□ 0.34
ATN1-201ENST00000356654 USHBP1Q8N6Y0 703 aa17.19■□□□□ 0.34
ATN1-201ENST00000356654 DDX54Q8TDD1 881 aaKnown RBP17.19■□□□□ 0.34
ATN1-201ENST00000356654 ZNF518AQ6AHZ1 1483 aa17.19■□□□□ 0.34
ATN1-201ENST00000356654 FYB1O15117 783 aa17.19■□□□□ 0.34
ATN1-201ENST00000356654 GOLGA6L3A6NEY3 463 aa17.18■□□□□ 0.34
ATN1-201ENST00000356654 RUFY2Q8WXA3 655 aa17.18■□□□□ 0.34
ATN1-201ENST00000356654 NEUROD6Q96NK8 337 aa17.18■□□□□ 0.34
ATN1-201ENST00000356654 PRDM11Q9NQV5 511 aa17.18■□□□□ 0.34
ATN1-201ENST00000356654 HSP90AB4PQ58FF6 505 aa17.18■□□□□ 0.34
ATN1-201ENST00000356654 TOM1L2Q6ZVM7 507 aa17.18■□□□□ 0.34
ATN1-201ENST00000356654 PHF8Q9UPP1 1060 aa17.18■□□□□ 0.34
ATN1-201ENST00000356654 GNAI2P04899 355 aa17.17■□□□□ 0.34
ATN1-201ENST00000356654 ABCC2Q92887 1545 aa17.16■□□□□ 0.34
ATN1-201ENST00000356654 CDC45O75419 566 aa17.16■□□□□ 0.34
ATN1-201ENST00000356654 PTMSP20962 102 aa17.16■□□□□ 0.34
ATN1-201ENST00000356654 DDX49Q9Y6V7 483 aaKnown RBP17.16■□□□□ 0.34
ATN1-201ENST00000356654 CARD14Q9BXL6 1004 aa17.16■□□□□ 0.34
ATN1-201ENST00000356654 ZKSCAN1P17029 563 aaPredicted RBP17.16■□□□□ 0.34
ATN1-201ENST00000356654 CLASRPQ8N2M8 674 aaKnown RBP17.15■□□□□ 0.34
ATN1-201ENST00000356654 PER1O15534 1290 aaPredicted RBP17.15■□□□□ 0.34
ATN1-201ENST00000356654 ACEP12821 1306 aa17.15■□□□□ 0.34
ATN1-201ENST00000356654 GCC1Q96CN9 775 aa17.15■□□□□ 0.34
ATN1-201ENST00000356654 SAMD9Q5K651 1589 aa17.15■□□□□ 0.34
ATN1-201ENST00000356654 DRC7Q8IY82 874 aa17.14■□□□□ 0.34
ATN1-201ENST00000356654 RBM42Q9BTD8 480 aaKnown RBP17.14■□□□□ 0.34
ATN1-201ENST00000356654 CHMP5Q9NZZ3 219 aa17.14■□□□□ 0.33
ATN1-201ENST00000356654 TARBP1Q13395 1621 aaKnown RBP17.13■□□□□ 0.33
ATN1-201ENST00000356654 FAM177BA6PVY3 158 aa17.13■□□□□ 0.33
ATN1-201ENST00000356654 MYL6BP14649 208 aa17.13■□□□□ 0.33
ATN1-201ENST00000356654 ZRANB1Q9UGI0 708 aa17.13■□□□□ 0.33
ATN1-201ENST00000356654 FAM83GA6ND36 823 aa17.13■□□□□ 0.33
ATN1-201ENST00000356654 SRCIN1Q9C0H9 1055 aa17.13■□□□□ 0.33
ATN1-201ENST00000356654 TNRQ92752 1358 aa17.13■□□□□ 0.33
ATN1-201ENST00000356654 ABCC10Q5T3U5 1492 aa17.13■□□□□ 0.33
ATN1-201ENST00000356654 PBRM1Q86U86 1689 aa17.13■□□□□ 0.33
ATN1-201ENST00000356654 GNAT3A8MTJ3 354 aa17.13■□□□□ 0.33
ATN1-201ENST00000356654 CDK11BP21127 795 aaKnown RBP17.13■□□□□ 0.33
ATN1-201ENST00000356654 SYAP1Q96A49 352 aaPredicted RBP17.13■□□□□ 0.33
ATN1-201ENST00000356654 CEP170Q5SW79 1584 aa17.13■□□□□ 0.33
ATN1-201ENST00000356654 SHANK2Q9UPX8 1470 aa17.13■□□□□ 0.33
ATN1-201ENST00000356654 ERC2O15083 957 aa17.12■□□□□ 0.33
ATN1-201ENST00000356654 MSNP26038 577 aaKnown RBP17.12■□□□□ 0.33
ATN1-201ENST00000356654 CCT4P50991 539 aaKnown RBP17.12■□□□□ 0.33
ATN1-201ENST00000356654 BTBD11A6QL63 1104 aa17.12■□□□□ 0.33
ATN1-201ENST00000356654 CABP4P57796 275 aa17.12■□□□□ 0.33
ATN1-201ENST00000356654 TMX4Q9H1E5 349 aaPredicted RBP17.11■□□□□ 0.33
ATN1-201ENST00000356654 MSH5O43196 834 aa17.11■□□□□ 0.33
ATN1-201ENST00000356654 DNMT1P26358 1616 aaKnown RBP17.11■□□□□ 0.33
ATN1-201ENST00000356654 DDX11L8A8MPP1 907 aa17.11■□□□□ 0.33
ATN1-201ENST00000356654 HTATSF1O43719 755 aaKnown RBP17.11■□□□□ 0.33
ATN1-201ENST00000356654 APPP05067 770 aa17.11■□□□□ 0.33
ATN1-201ENST00000356654 HSP90AB2PQ58FF8 381 aa17.11■□□□□ 0.33
ATN1-201ENST00000356654 KCNH5Q8NCM2 988 aa17.11■□□□□ 0.33
ATN1-201ENST00000356654 GSE1Q14687 1217 aa17.1■□□□□ 0.33
ATN1-201ENST00000356654 CHD1LQ86WJ1 897 aa17.1■□□□□ 0.33
ATN1-201ENST00000356654 PARD3Q8TEW0 1356 aa17.1■□□□□ 0.33
ATN1-201ENST00000356654 NFKBIBQ15653 356 aa17.09■□□□□ 0.33
ATN1-201ENST00000356654 NCKAP5LQ9HCH0 1330 aa17.09■□□□□ 0.33
ATN1-201ENST00000356654 G3V3G9 751 aa17.09■□□□□ 0.33
ATN1-201ENST00000356654 DCAF8Q5TAQ9 597 aa17.09■□□□□ 0.33
ATN1-201ENST00000356654 FAM184AQ8NB25 1140 aa17.09■□□□□ 0.33
ATN1-201ENST00000356654 IFT57Q9NWB7 429 aa17.09■□□□□ 0.33
ATN1-201ENST00000356654 SPG7Q9UQ90 795 aa17.09■□□□□ 0.33
ATN1-201ENST00000356654 NKTRP30414 1462 aaKnown RBP17.09■□□□□ 0.33
ATN1-201ENST00000356654 NINLQ9Y2I6 1382 aa17.08■□□□□ 0.33
ATN1-201ENST00000356654 F6X3S4 739 aa17.08■□□□□ 0.33
ATN1-201ENST00000356654 SIL1Q9H173 461 aa17.08■□□□□ 0.33
ATN1-201ENST00000356654 NUTM2BA6NNL0 878 aaPredicted RBP17.08■□□□□ 0.32
ATN1-201ENST00000356654 NUTM2EB1AL46 878 aaPredicted RBP17.08■□□□□ 0.32
ATN1-201ENST00000356654 TRIM27P14373 513 aa17.08■□□□□ 0.32
ATN1-201ENST00000356654 NUTM2AQ8IVF1 878 aaPredicted RBP17.08■□□□□ 0.32
ATN1-201ENST00000356654 H3BQV1 296 aa17.08■□□□□ 0.32
ATN1-201ENST00000356654 IFFO2Q5TF58 517 aa17.08■□□□□ 0.32
ATN1-201ENST00000356654 IL1RAPL2Q9NP60 686 aa17.08■□□□□ 0.32
ATN1-201ENST00000356654 UHRF1BP1LA0JNW5 1464 aa17.07■□□□□ 0.32
ATN1-201ENST00000356654 MPRIPQ6WCQ1 1025 aa17.07■□□□□ 0.32
ATN1-201ENST00000356654 EXOC6BQ9Y2D4 811 aa17.07■□□□□ 0.32
ATN1-201ENST00000356654 ADGRL2O95490 1459 aa17.07■□□□□ 0.32
ATN1-201ENST00000356654 GOLGA6L6A8MZA4 724 aa17.07■□□□□ 0.32
ATN1-201ENST00000356654 SRGAP3O43295 1099 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms