RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 CFAP53Q96M91 514 aa18.23■□□□□ 0.51
LSS-201ENST00000356396 PPP4R2Q9NY27 417 aa18.23■□□□□ 0.51
LSS-201ENST00000356396 ORAI2Q96SN7 254 aa18.22■□□□□ 0.51
LSS-201ENST00000356396 ATAD2Q6PL18 1390 aa18.22■□□□□ 0.51
LSS-201ENST00000356396 PANK1Q8TE04 598 aa18.21■□□□□ 0.51
LSS-201ENST00000356396 FOXO3O43524 673 aa18.21■□□□□ 0.51
LSS-201ENST00000356396 CPS1P31327 1500 aa18.21■□□□□ 0.51
LSS-201ENST00000356396 RIMS1Q86UR5 1692 aaKnown RBP18.21■□□□□ 0.51
LSS-201ENST00000356396 DIAPH1O60610 1272 aaKnown RBP18.21■□□□□ 0.5
LSS-201ENST00000356396 ESCO1Q5FWF5 840 aa18.21■□□□□ 0.5
LSS-201ENST00000356396 USHBP1Q8N6Y0 703 aa18.21■□□□□ 0.5
LSS-201ENST00000356396 COG3Q96JB2 828 aa18.21■□□□□ 0.5
LSS-201ENST00000356396 BLMP54132 1417 aaPredicted RBP18.2■□□□□ 0.5
LSS-201ENST00000356396 UBR1Q8IWV7 1749 aa18.2■□□□□ 0.5
LSS-201ENST00000356396 SLFN5Q08AF3 891 aa18.2■□□□□ 0.5
LSS-201ENST00000356396 NEURL4Q96JN8 1562 aa18.2■□□□□ 0.5
LSS-201ENST00000356396 FER1L4A9Z1Z3 1794 aa18.19■□□□□ 0.5
LSS-201ENST00000356396 REREQ9P2R6 1566 aa18.19■□□□□ 0.5
LSS-201ENST00000356396 SLC24A1O60721 1099 aa18.19■□□□□ 0.5
LSS-201ENST00000356396 RIPK4P57078 832 aa18.19■□□□□ 0.5
LSS-201ENST00000356396 ANKLE2Q86XL3 938 aa18.19■□□□□ 0.5
LSS-201ENST00000356396 MYO3AQ8NEV4 1616 aa18.19■□□□□ 0.5
LSS-201ENST00000356396 SETD1BQ9UPS6 1966 aaKnown RBP18.19■□□□□ 0.5
LSS-201ENST00000356396 RUNDC1Q96C34 613 aa18.18■□□□□ 0.5
LSS-201ENST00000356396 MIS18AQ9NYP9 233 aa18.18■□□□□ 0.5
LSS-201ENST00000356396 NLRP6P59044 892 aa18.18■□□□□ 0.5
LSS-201ENST00000356396 CANXP27824 592 aaKnown RBP18.17■□□□□ 0.5
LSS-201ENST00000356396 KRT24Q2M2I5 525 aa18.17■□□□□ 0.5
LSS-201ENST00000356396 COG6Q9Y2V7 657 aa18.16■□□□□ 0.5
LSS-201ENST00000356396 ZNF521Q96K83 1311 aa18.15■□□□□ 0.5
LSS-201ENST00000356396 ZNF428Q96B54 188 aa18.15■□□□□ 0.5
LSS-201ENST00000356396 MAPK8IP3Q9UPT6 1336 aa18.15■□□□□ 0.5
LSS-201ENST00000356396 GOLGB1Q14789 3259 aaKnown RBP18.15■□□□□ 0.5
LSS-201ENST00000356396 TTC21BQ7Z4L5 1316 aa18.15■□□□□ 0.5
LSS-201ENST00000356396 SULT6B1Q6IMI4 303 aa18.14■□□□□ 0.49
LSS-201ENST00000356396 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.14■□□□□ 0.49
LSS-201ENST00000356396 ABTB2Q8N961 1025 aa18.14■□□□□ 0.49
LSS-201ENST00000356396 RBM19Q9Y4C8 960 aaKnown RBP18.14■□□□□ 0.49
LSS-201ENST00000356396 POLR3AO14802 1390 aaPredicted RBP18.13■□□□□ 0.49
LSS-201ENST00000356396 PLEKHG1Q9ULL1 1385 aa18.13■□□□□ 0.49
LSS-201ENST00000356396 TMPOP42166 694 aaKnown RBP18.13■□□□□ 0.49
LSS-201ENST00000356396 NKTRP30414 1462 aaKnown RBP18.13■□□□□ 0.49
LSS-201ENST00000356396 EXOSC9Q06265 439 aaKnown RBP18.12■□□□□ 0.49
LSS-201ENST00000356396 TRIM35Q9UPQ4 493 aa18.12■□□□□ 0.49
LSS-201ENST00000356396 TBX22Q9Y458 520 aa18.12■□□□□ 0.49
LSS-201ENST00000356396 NPC1L1Q9UHC9 1359 aa18.11■□□□□ 0.49
LSS-201ENST00000356396 SETD1AO15047 1707 aaKnown RBP18.11■□□□□ 0.49
LSS-201ENST00000356396 NLRP1Q9C000 1473 aa18.11■□□□□ 0.49
LSS-201ENST00000356396 MCM10Q7L590 875 aa18.11■□□□□ 0.49
LSS-201ENST00000356396 RLBP1P12271 317 aa18.11■□□□□ 0.49
LSS-201ENST00000356396 CABLES1Q8TDN4 633 aa18.11■□□□□ 0.49
LSS-201ENST00000356396 PROSER2Q86WR7 435 aaPredicted RBP18.1■□□□□ 0.49
LSS-201ENST00000356396 PLEKHF1Q96S99 279 aa18.1■□□□□ 0.49
LSS-201ENST00000356396 ATP7BP35670 1465 aa18.1■□□□□ 0.49
LSS-201ENST00000356396 RGPD8O14715 1765 aaPredicted RBP18.09■□□□□ 0.49
LSS-201ENST00000356396 NPM2Q86SE8 214 aaKnown RBP18.09■□□□□ 0.49
LSS-201ENST00000356396 NECTIN2Q92692 538 aa18.09■□□□□ 0.49
LSS-201ENST00000356396 EIF4A2Q14240 407 aaKnown RBP18.08■□□□□ 0.49
LSS-201ENST00000356396 TSPYL6Q8N831 410 aa18.08■□□□□ 0.49
LSS-201ENST00000356396 RGS3P49796 1198 aa18.08■□□□□ 0.48
LSS-201ENST00000356396 AMPHP49418 695 aa18.07■□□□□ 0.48
LSS-201ENST00000356396 PDE3BQ13370 1112 aa18.07■□□□□ 0.48
LSS-201ENST00000356396 MAP3K19Q56UN5 1328 aa18.06■□□□□ 0.48
LSS-201ENST00000356396 PSME1Q06323 249 aa18.06■□□□□ 0.48
LSS-201ENST00000356396 RNF123Q5XPI4 1314 aa18.05■□□□□ 0.48
LSS-201ENST00000356396 IL13P35225 146 aa18.05■□□□□ 0.48
LSS-201ENST00000356396 ZC3H6P61129 1189 aaKnown RBP18.05■□□□□ 0.48
LSS-201ENST00000356396 RSPH6AQ9H0K4 717 aa18.05■□□□□ 0.48
LSS-201ENST00000356396 E9PSI1 815 aa18.05■□□□□ 0.48
LSS-201ENST00000356396 LRRC59Q96AG4 307 aaKnown RBP18.05■□□□□ 0.48
LSS-201ENST00000356396 SHPRHQ149N8 1683 aa18.04■□□□□ 0.48
LSS-201ENST00000356396 FANCIQ9NVI1 1328 aa18.03■□□□□ 0.48
LSS-201ENST00000356396 CPSF1Q10570 1443 aaKnown RBP18.03■□□□□ 0.48
LSS-201ENST00000356396 MAP2P11137 1827 aaKnown RBP18.03■□□□□ 0.48
LSS-201ENST00000356396 PHF8Q9UPP1 1060 aa18.02■□□□□ 0.48
LSS-201ENST00000356396 CEP170BQ9Y4F5 1589 aaPredicted RBP18.01■□□□□ 0.47
LSS-201ENST00000356396 DLC1Q96QB1 1528 aa18.01■□□□□ 0.47
LSS-201ENST00000356396 RARSP54136 660 aaKnown RBP18■□□□□ 0.47
LSS-201ENST00000356396 SMC4Q9NTJ3 1288 aa18■□□□□ 0.47
LSS-201ENST00000356396 KDM4FA0A1W2PPD8 638 aa18■□□□□ 0.47
LSS-201ENST00000356396 EDC4Q6P2E9 1401 aaKnown RBP17.99■□□□□ 0.47
LSS-201ENST00000356396 SSH1Q8WYL5 1049 aa17.99■□□□□ 0.47
LSS-201ENST00000356396 TRMT2AQ8IZ69 625 aaKnown RBP17.99■□□□□ 0.47
LSS-201ENST00000356396 PUS7Q96PZ0 661 aaKnown RBP17.99■□□□□ 0.47
LSS-201ENST00000356396 IGHDP01880 384 aa17.98■□□□□ 0.47
LSS-201ENST00000356396 ZNF692Q9BU19 519 aaPredicted RBP17.98■□□□□ 0.47
LSS-201ENST00000356396 C1orf115Q9H7X2 142 aa17.98■□□□□ 0.47
LSS-201ENST00000356396 USP6P35125 1406 aa17.98■□□□□ 0.47
LSS-201ENST00000356396 INSRP06213 1382 aa17.97■□□□□ 0.47
LSS-201ENST00000356396 CHRNA2Q15822 529 aa17.97■□□□□ 0.47
LSS-201ENST00000356396 FAM135BQ49AJ0 1406 aa17.97■□□□□ 0.47
LSS-201ENST00000356396 PLEKHG3A1L390 1219 aa17.97■□□□□ 0.47
LSS-201ENST00000356396 EYA1Q99502 592 aa17.97■□□□□ 0.47
LSS-201ENST00000356396 NEFMP07197 916 aa17.97■□□□□ 0.47
LSS-201ENST00000356396 MED14O60244 1454 aa17.96■□□□□ 0.47
LSS-201ENST00000356396 C8orf58Q8NAV2 365 aa17.96■□□□□ 0.47
LSS-201ENST00000356396 ARHGAP23Q9P227 1491 aa17.95■□□□□ 0.46
LSS-201ENST00000356396 COL3A1P02461 1466 aaPredicted RBP17.95■□□□□ 0.46
LSS-201ENST00000356396 NOB1Q9ULX3 412 aaKnown RBP17.95■□□□□ 0.46
LSS-201ENST00000356396 NSD2O96028 1365 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms