RNA–Protein interactions for RNA: ENST00000356175.7

NF1-201, Transcript of neurofibromin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NF1, Length 12,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-201ENST00000356175 CCDC97Q96F63 343 aaPredicted RBP8.12□□□□□ -1.11
NF1-201ENST00000356175 TPX2Q9ULW0 747 aaKnown RBP8.12□□□□□ -1.11
NF1-201ENST00000356175 WASHC2CQ9Y4E1 1318 aa8.12□□□□□ -1.11
NF1-201ENST00000356175 USP25Q9UHP3 1055 aa8.12□□□□□ -1.11
NF1-201ENST00000356175 MYH13Q9UKX3 1938 aa8.12□□□□□ -1.11
NF1-201ENST00000356175 MYH3P11055 1940 aa8.12□□□□□ -1.11
NF1-201ENST00000356175 CCP110O43303 1012 aa8.11□□□□□ -1.11
NF1-201ENST00000356175 EIF3JO75822 258 aaKnown RBP8.11□□□□□ -1.11
NF1-201ENST00000356175 IRAK4Q9NWZ3 460 aa8.11□□□□□ -1.11
NF1-201ENST00000356175 VPS8Q8N3P4 1428 aa8.11□□□□□ -1.11
NF1-201ENST00000356175 RNF216Q9NWF9 866 aaPredicted RBP8.11□□□□□ -1.11
NF1-201ENST00000356175 PAIP2Q9BPZ3 127 aaKnown RBP8.11□□□□□ -1.11
NF1-201ENST00000356175 ANO2Q9NQ90 1003 aa8.11□□□□□ -1.11
NF1-201ENST00000356175 G3BP2Q9UN86 482 aaKnown RBP8.11□□□□□ -1.11
NF1-201ENST00000356175 DIDO1Q9BTC0 2240 aaKnown RBP8.11□□□□□ -1.11
NF1-201ENST00000356175 SHTN1A0MZ66 631 aa8.11□□□□□ -1.11
NF1-201ENST00000356175 DZIP1Q86YF9 867 aaKnown RBP8.11□□□□□ -1.11
NF1-201ENST00000356175 LNPKQ9C0E8 428 aa8.11□□□□□ -1.11
NF1-201ENST00000356175 SSFA2P28290 1259 aa8.11□□□□□ -1.11
NF1-201ENST00000356175 CCDC88BA6NC98 1476 aa8.11□□□□□ -1.11
NF1-201ENST00000356175 CFAP53Q96M91 514 aa8.11□□□□□ -1.11
NF1-201ENST00000356175 SETD5Q9C0A6 1442 aa8.11□□□□□ -1.11
NF1-201ENST00000356175 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.11□□□□□ -1.11
NF1-201ENST00000356175 OFD1O75665 1012 aa8.11□□□□□ -1.11
NF1-201ENST00000356175 CALR3Q96L12 384 aaKnown RBP8.11□□□□□ -1.11
NF1-201ENST00000356175 CFAP45Q9UL16 551 aa8.1□□□□□ -1.11
NF1-201ENST00000356175 FILIP1Q7Z7B0 1213 aa8.1□□□□□ -1.11
NF1-201ENST00000356175 UBXN4Q92575 508 aa8.1□□□□□ -1.11
NF1-201ENST00000356175 NEK11Q8NG66 645 aa8.1□□□□□ -1.11
NF1-201ENST00000356175 POLD1P28340 1107 aa8.1□□□□□ -1.11
NF1-201ENST00000356175 CCDC160A6NGH7 325 aa8.1□□□□□ -1.11
NF1-201ENST00000356175 CGNL1Q0VF96 1302 aa8.1□□□□□ -1.11
NF1-201ENST00000356175 PHACTR2O75167 634 aa8.1□□□□□ -1.11
NF1-201ENST00000356175 CA8P35219 290 aa8.09□□□□□ -1.11
NF1-201ENST00000356175 MCM6Q14566 821 aa8.09□□□□□ -1.11
NF1-201ENST00000356175 PLEKHA4Q9H4M7 779 aa8.09□□□□□ -1.11
NF1-201ENST00000356175 GCKP35557 465 aa8.09□□□□□ -1.11
NF1-201ENST00000356175 SEPT14Q6ZU15 432 aa8.09□□□□□ -1.11
NF1-201ENST00000356175 FAM212AQ96EL1 285 aa8.09□□□□□ -1.11
NF1-201ENST00000356175 HYPKQ9NX55 129 aa8.09□□□□□ -1.11
NF1-201ENST00000356175 DIXDC1Q155Q3 683 aa8.09□□□□□ -1.11
NF1-201ENST00000356175 CCDC184Q52MB2 194 aa8.09□□□□□ -1.11
NF1-201ENST00000356175 RSF1Q96T23 1441 aaPredicted RBP8.09□□□□□ -1.11
NF1-201ENST00000356175 FLIIQ13045 1269 aa8.09□□□□□ -1.11
NF1-201ENST00000356175 PDE1CQ14123 709 aaPredicted RBP8.09□□□□□ -1.11
NF1-201ENST00000356175 CCDC181Q5TID7 509 aa8.09□□□□□ -1.11
NF1-201ENST00000356175 VPS18Q9P253 973 aa8.09□□□□□ -1.11
NF1-201ENST00000356175 ARMCX6Q7L4S7 300 aa8.09□□□□□ -1.11
NF1-201ENST00000356175 KIF20AO95235 890 aa8.09□□□□□ -1.11
NF1-201ENST00000356175 NUCB2P80303 420 aa8.08□□□□□ -1.12
NF1-201ENST00000356175 ZRSR2Q15696 482 aaKnown RBP8.08□□□□□ -1.12
NF1-201ENST00000356175 CEP135Q66GS9 1140 aa8.08□□□□□ -1.12
NF1-201ENST00000356175 ADCY5O95622 1261 aa8.08□□□□□ -1.12
NF1-201ENST00000356175 CTR9Q6PD62 1173 aa8.08□□□□□ -1.12
NF1-201ENST00000356175 TNPO1Q92973 898 aaKnown RBP8.08□□□□□ -1.12
NF1-201ENST00000356175 CAPN2P17655 700 aa8.08□□□□□ -1.12
NF1-201ENST00000356175 ATP2B2Q01814 1243 aa8.08□□□□□ -1.12
NF1-201ENST00000356175 EP400NLQ6ZTU2 488 aa8.08□□□□□ -1.12
NF1-201ENST00000356175 RAI14Q9P0K7 980 aa8.08□□□□□ -1.12
NF1-201ENST00000356175 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.08□□□□□ -1.12
NF1-201ENST00000356175 ERCC4Q92889 916 aaPredicted RBP8.08□□□□□ -1.12
NF1-201ENST00000356175 TNMDQ9H2S6 317 aa8.08□□□□□ -1.12
NF1-201ENST00000356175 MORC4Q8TE76 937 aa8.08□□□□□ -1.12
NF1-201ENST00000356175 USH1CQ9Y6N9 552 aa8.07□□□□□ -1.12
NF1-201ENST00000356175 PTPN14Q15678 1187 aa8.07□□□□□ -1.12
NF1-201ENST00000356175 WDR66Q8TBY9 1149 aa8.07□□□□□ -1.12
NF1-201ENST00000356175 GOLGA6L7A0A1B0GV03 622 aa8.07□□□□□ -1.12
NF1-201ENST00000356175 ZNF622Q969S3 477 aaKnown RBP eCLIP8.07□□□□□ -1.126e-7■□□□□ 8.1
NF1-201ENST00000356175 TTC12Q9H892 705 aaPredicted RBP8.07□□□□□ -1.12
NF1-201ENST00000356175 TSPY4P0CV99 314 aa8.07□□□□□ -1.12
NF1-201ENST00000356175 TSPY10P0CW01 314 aa8.07□□□□□ -1.12
NF1-201ENST00000356175 SETSIPP0DME0 302 aa8.07□□□□□ -1.12
NF1-201ENST00000356175 SF3A3Q12874 501 aaKnown RBP eCLIP8.07□□□□□ -1.124e-6■■■■□ 22.2
NF1-201ENST00000356175 MYO6Q9UM54 1294 aa8.07□□□□□ -1.12
NF1-201ENST00000356175 ERLIN1O75477 346 aa8.06□□□□□ -1.12
NF1-201ENST00000356175 CDCA7LQ96GN5 454 aa8.06□□□□□ -1.12
NF1-201ENST00000356175 JAKMIP3Q5VZ66 844 aa8.06□□□□□ -1.12
NF1-201ENST00000356175 HOOK1Q9UJC3 728 aaKnown RBP8.06□□□□□ -1.12
NF1-201ENST00000356175 ZSCAN23Q3MJ62 389 aa8.06□□□□□ -1.12
NF1-201ENST00000356175 SLC4A10Q6U841 1118 aa8.06□□□□□ -1.12
NF1-201ENST00000356175 KIAA1328Q86T90 577 aa8.06□□□□□ -1.12
NF1-201ENST00000356175 ANKRD18AQ8IVF6 992 aa8.06□□□□□ -1.12
NF1-201ENST00000356175 EZRP15311 586 aaKnown RBP8.06□□□□□ -1.12
NF1-201ENST00000356175 DNA2P51530 1060 aa8.06□□□□□ -1.12
NF1-201ENST00000356175 NGEFQ8N5V2 710 aa8.06□□□□□ -1.12
NF1-201ENST00000356175 MYH7P12883 1935 aa8.06□□□□□ -1.12
NF1-201ENST00000356175 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.06□□□□□ -1.123e-7■□□□□ 10
NF1-201ENST00000356175 ECM2O94769 699 aaPredicted RBP8.06□□□□□ -1.12
NF1-201ENST00000356175 INF2Q27J81 1249 aa8.06□□□□□ -1.12
NF1-201ENST00000356175 PAF1Q8N7H5 531 aa8.06□□□□□ -1.12
NF1-201ENST00000356175 RBM28Q9NW13 759 aaKnown RBP8.06□□□□□ -1.12
NF1-201ENST00000356175 MSL1Q68DK7 614 aa8.06□□□□□ -1.12
NF1-201ENST00000356175 ATP6V1DQ9Y5K8 247 aa8.06□□□□□ -1.12
NF1-201ENST00000356175 IRX5P78411 483 aaPredicted RBP8.06□□□□□ -1.12
NF1-201ENST00000356175 OGFRQ9NZT2 677 aa8.06□□□□□ -1.12
NF1-201ENST00000356175 ZNF513Q8N8E2 541 aaPredicted RBP8.05□□□□□ -1.12
NF1-201ENST00000356175 SMC3Q9UQE7 1217 aa8.05□□□□□ -1.12
NF1-201ENST00000356175 AP1ARQ63HQ0 302 aa8.05□□□□□ -1.12
NF1-201ENST00000356175 CASQ1P31415 396 aa8.05□□□□□ -1.12
NF1-201ENST00000356175 MYH15Q9Y2K3 1946 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms