RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 DNTTIP2Q5QJE6 756 aaKnown RBP9.45□□□□□ -0.9
CCR9-201ENST00000355983 CAVIN1Q6NZI2 390 aaKnown RBP9.45□□□□□ -0.9
CCR9-201ENST00000355983 FAM184AQ8NB25 1140 aa9.45□□□□□ -0.9
CCR9-201ENST00000355983 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.45□□□□□ -0.9
CCR9-201ENST00000355983 FANCD2Q9BXW9 1451 aa9.45□□□□□ -0.9
CCR9-201ENST00000355983 IRX5P78411 483 aaPredicted RBP9.45□□□□□ -0.9
CCR9-201ENST00000355983 POLR3AO14802 1390 aaPredicted RBP9.44□□□□□ -0.9
CCR9-201ENST00000355983 A2MP01023 1474 aa9.44□□□□□ -0.9
CCR9-201ENST00000355983 CCDC27Q2M243 656 aa9.44□□□□□ -0.9
CCR9-201ENST00000355983 WWC1Q8IX03 1113 aa9.44□□□□□ -0.9
CCR9-201ENST00000355983 CDC42BPAQ5VT25 1732 aa9.44□□□□□ -0.9
CCR9-201ENST00000355983 TPM3P06753 285 aa9.44□□□□□ -0.9
CCR9-201ENST00000355983 NUP155O75694 1391 aa9.44□□□□□ -0.9
CCR9-201ENST00000355983 RLBP1P12271 317 aa9.43□□□□□ -0.9
CCR9-201ENST00000355983 TIGD1Q96MW7 591 aa9.43□□□□□ -0.9
CCR9-201ENST00000355983 YY1AP1Q9H869 796 aa9.43□□□□□ -0.9
CCR9-201ENST00000355983 CALCOCO1Q9P1Z2 691 aa9.43□□□□□ -0.9
CCR9-201ENST00000355983 CGNQ9P2M7 1197 aaKnown RBP9.43□□□□□ -0.9
CCR9-201ENST00000355983 ATP10AO60312 1499 aa9.43□□□□□ -0.9
CCR9-201ENST00000355983 SHPRHQ149N8 1683 aa9.43□□□□□ -0.9
CCR9-201ENST00000355983 SLFN14P0C7P3 912 aa9.43□□□□□ -0.9
CCR9-201ENST00000355983 ZNF771Q7L3S4 317 aaPredicted RBP9.43□□□□□ -0.9
CCR9-201ENST00000355983 GAS2L2Q8NHY3 880 aa9.43□□□□□ -0.9
CCR9-201ENST00000355983 PLB1Q6P1J6 1458 aa9.43□□□□□ -0.9
CCR9-201ENST00000355983 RABEP1Q15276 862 aa9.42□□□□□ -0.9
CCR9-201ENST00000355983 TROQ12816 1431 aaPredicted RBP9.42□□□□□ -0.9
CCR9-201ENST00000355983 GPATCH8Q9UKJ3 1502 aaKnown RBP9.42□□□□□ -0.9
CCR9-201ENST00000355983 ADGRL1O94910 1474 aa9.42□□□□□ -0.9
CCR9-201ENST00000355983 NUCB1Q02818 461 aa9.42□□□□□ -0.9
CCR9-201ENST00000355983 ARID3AQ99856 593 aa9.42□□□□□ -0.9
CCR9-201ENST00000355983 MORC2Q9Y6X9 1032 aaPredicted RBP9.42□□□□□ -0.9
CCR9-201ENST00000355983 ARHGEF5Q12774 1597 aa9.41□□□□□ -0.9
CCR9-201ENST00000355983 CHAF1AQ13111 956 aaPredicted RBP9.41□□□□□ -0.9
CCR9-201ENST00000355983 MCTP1Q6DN14 999 aa9.41□□□□□ -0.9
CCR9-201ENST00000355983 PAXIP1Q6ZW49 1069 aaPredicted RBP9.41□□□□□ -0.9
CCR9-201ENST00000355983 GPT2Q8TD30 523 aa9.41□□□□□ -0.9
CCR9-201ENST00000355983 SYAP1Q96A49 352 aaPredicted RBP9.41□□□□□ -0.9
CCR9-201ENST00000355983 RAPGEF6Q8TEU7 1601 aa9.41□□□□□ -0.9
CCR9-201ENST00000355983 UNC13BO14795 1591 aa9.41□□□□□ -0.9
CCR9-201ENST00000355983 PHF14O94880 888 aa9.41□□□□□ -0.9
CCR9-201ENST00000355983 PTMAP06454 111 aaKnown RBP9.41□□□□□ -0.9
CCR9-201ENST00000355983 IRX3P78415 501 aaPredicted RBP9.41□□□□□ -0.9
CCR9-201ENST00000355983 TSPY26PQ9H489 355 aa9.41□□□□□ -0.9
CCR9-201ENST00000355983 DDX19BQ9UMR2 479 aa9.41□□□□□ -0.9
CCR9-201ENST00000355983 KDM5AP29375 1690 aaKnown RBP9.41□□□□□ -0.9
CCR9-201ENST00000355983 ZKSCAN2Q63HK3 967 aa9.4□□□□□ -0.9
CCR9-201ENST00000355983 DDX41Q9UJV9 622 aaKnown RBP9.4□□□□□ -0.9
CCR9-201ENST00000355983 KDM2AQ9Y2K7 1162 aa9.4□□□□□ -0.9
CCR9-201ENST00000355983 ZNF644Q9H582 1327 aaPredicted RBP9.4□□□□□ -0.9
CCR9-201ENST00000355983 AK9Q5TCS8 1911 aa9.4□□□□□ -0.9
CCR9-201ENST00000355983 ANKRD36BQ8N2N9 1353 aa9.4□□□□□ -0.9
CCR9-201ENST00000355983 BRD2P25440 801 aaKnown RBP9.4□□□□□ -0.9
CCR9-201ENST00000355983 CTNNA3Q9UI47 895 aa9.4□□□□□ -0.9
CCR9-201ENST00000355983 DMRT2Q9Y5R5 561 aa9.4□□□□□ -0.9
CCR9-201ENST00000355983 DZIP1LQ8IYY4 767 aaKnown RBP9.39□□□□□ -0.91
CCR9-201ENST00000355983 TMEM63CQ9P1W3 806 aa9.39□□□□□ -0.91
CCR9-201ENST00000355983 NUP153P49790 1475 aaKnown RBP9.39□□□□□ -0.91
CCR9-201ENST00000355983 TULP1O00294 542 aaPredicted RBP9.39□□□□□ -0.91
CCR9-201ENST00000355983 CD2BP2O95400 341 aaKnown RBP9.39□□□□□ -0.91
CCR9-201ENST00000355983 TERF2Q15554 542 aa9.39□□□□□ -0.91
CCR9-201ENST00000355983 EFCC1Q9HA90 598 aa9.39□□□□□ -0.91
CCR9-201ENST00000355983 FAM53CQ9NYF3 392 aa9.39□□□□□ -0.91
CCR9-201ENST00000355983 CEP152O94986 1710 aa9.39□□□□□ -0.91
CCR9-201ENST00000355983 C9orf84Q5VXU9 1444 aa9.39□□□□□ -0.91
CCR9-201ENST00000355983 KIAA1210Q9ULL0 1709 aa9.39□□□□□ -0.91
CCR9-201ENST00000355983 KCNJ4P48050 445 aa9.38□□□□□ -0.91
CCR9-201ENST00000355983 MMP14P50281 582 aa9.38□□□□□ -0.91
CCR9-201ENST00000355983 CCDC146Q8IYE0 955 aa9.38□□□□□ -0.91
CCR9-201ENST00000355983 VGLL3A8MV65 326 aa9.38□□□□□ -0.91
CCR9-201ENST00000355983 U2AF2P26368 475 aaKnown RBP eCLIP9.38□□□□□ -0.91
CCR9-201ENST00000355983 RGS22Q8NE09 1264 aa9.38□□□□□ -0.91
CCR9-201ENST00000355983 ADGRB2O60241 1585 aa9.38□□□□□ -0.91
CCR9-201ENST00000355983 ATAD2Q6PL18 1390 aa9.38□□□□□ -0.91
CCR9-201ENST00000355983 TTC37Q6PGP7 1564 aa9.37□□□□□ -0.91
CCR9-201ENST00000355983 MADDQ8WXG6 1647 aa9.37□□□□□ -0.91
CCR9-201ENST00000355983 SPDYE4A6NLX3 237 aa9.37□□□□□ -0.91
CCR9-201ENST00000355983 KIAA1524Q8TCG1 905 aa9.37□□□□□ -0.91
CCR9-201ENST00000355983 DUOX2Q9NRD8 1548 aa9.37□□□□□ -0.91
CCR9-201ENST00000355983 IQGAP3Q86VI3 1631 aa9.37□□□□□ -0.91
CCR9-201ENST00000355983 PPRC1Q5VV67 1664 aaKnown RBP9.37□□□□□ -0.91
CCR9-201ENST00000355983 SYCE3A1L190 88 aa9.37□□□□□ -0.91
CCR9-201ENST00000355983 RUNDC1Q96C34 613 aa9.37□□□□□ -0.91
CCR9-201ENST00000355983 RIOK3O14730 519 aaKnown RBP9.36□□□□□ -0.91
CCR9-201ENST00000355983 PRPF40AO75400 957 aaKnown RBP9.36□□□□□ -0.91
CCR9-201ENST00000355983 GEMIN8Q9NWZ8 242 aaKnown RBP9.36□□□□□ -0.91
CCR9-201ENST00000355983 USP25Q9UHP3 1055 aa9.36□□□□□ -0.91
CCR9-201ENST00000355983 PLA2R1Q13018 1463 aa9.36□□□□□ -0.91
CCR9-201ENST00000355983 KIAA0556O60303 1618 aa9.36□□□□□ -0.91
CCR9-201ENST00000355983 USP32Q8NFA0 1604 aa9.36□□□□□ -0.91
CCR9-201ENST00000355983 MYOM2P54296 1465 aa9.36□□□□□ -0.91
CCR9-201ENST00000355983 CHD1LQ86WJ1 897 aa9.36□□□□□ -0.91
CCR9-201ENST00000355983 KRT222Q8N1A0 295 aa9.36□□□□□ -0.91
CCR9-201ENST00000355983 GCC1Q96CN9 775 aa9.36□□□□□ -0.91
CCR9-201ENST00000355983 CFDP1Q9UEE9 299 aaPredicted RBP9.36□□□□□ -0.91
CCR9-201ENST00000355983 MED14O60244 1454 aa9.35□□□□□ -0.91
CCR9-201ENST00000355983 NCBP1Q09161 790 aaKnown RBP9.35□□□□□ -0.91
CCR9-201ENST00000355983 TSC1Q92574 1164 aa9.35□□□□□ -0.91
CCR9-201ENST00000355983 ZBTB40Q9NUA8 1239 aa9.35□□□□□ -0.91
CCR9-201ENST00000355983 SMTNL1A8MU46 457 aa9.35□□□□□ -0.91
CCR9-201ENST00000355983 RAD50Q92878 1312 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms