RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 WDR97A6NE52 1622 aa19.74■□□□□ 0.75
SHTN1-202ENST00000355371 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.73■□□□□ 0.75
SHTN1-202ENST00000355371 RABEP1Q15276 862 aa19.73■□□□□ 0.75
SHTN1-202ENST00000355371 SULT6B1Q6IMI4 303 aa19.72■□□□□ 0.75
SHTN1-202ENST00000355371 TSR2Q969E8 191 aaKnown RBP19.72■□□□□ 0.75
SHTN1-202ENST00000355371 PCF11O94913 1555 aaKnown RBP19.72■□□□□ 0.75
SHTN1-202ENST00000355371 IPO7O95373 1038 aaKnown RBP19.72■□□□□ 0.75
SHTN1-202ENST00000355371 MAGI1Q96QZ7 1491 aaPredicted RBP19.72■□□□□ 0.75
SHTN1-202ENST00000355371 BCAR3O75815 825 aa19.71■□□□□ 0.75
SHTN1-202ENST00000355371 CCDC70Q6NSX1 233 aa19.71■□□□□ 0.75
SHTN1-202ENST00000355371 PROSER2Q86WR7 435 aaPredicted RBP19.71■□□□□ 0.75
SHTN1-202ENST00000355371 ZNF428Q96B54 188 aa19.71■□□□□ 0.75
SHTN1-202ENST00000355371 AKNAQ7Z591 1439 aa19.71■□□□□ 0.75
SHTN1-202ENST00000355371 DHX16O60231 1041 aaKnown RBP19.71■□□□□ 0.75
SHTN1-202ENST00000355371 NCBP3Q53F19 620 aaKnown RBP19.71■□□□□ 0.75
SHTN1-202ENST00000355371 RBM33Q96EV2 1170 aaKnown RBP19.71■□□□□ 0.75
SHTN1-202ENST00000355371 SLC4A2P04920 1241 aa19.7■□□□□ 0.74
SHTN1-202ENST00000355371 TATP17735 454 aaPredicted RBP19.7■□□□□ 0.74
SHTN1-202ENST00000355371 MEX3CQ5U5Q3 659 aaKnown RBP19.7■□□□□ 0.74
SHTN1-202ENST00000355371 ATF7IPQ6VMQ6 1270 aa19.7■□□□□ 0.74
SHTN1-202ENST00000355371 LAMC3Q9Y6N6 1575 aa19.7■□□□□ 0.74
SHTN1-202ENST00000355371 HDGFL1Q5TGJ6 251 aa19.69■□□□□ 0.74
SHTN1-202ENST00000355371 HSP90AA2PQ14568 343 aaPredicted RBP19.69■□□□□ 0.74
SHTN1-202ENST00000355371 MVPQ14764 893 aaKnown RBP19.69■□□□□ 0.74
SHTN1-202ENST00000355371 FCHSD2O94868 740 aa19.69■□□□□ 0.74
SHTN1-202ENST00000355371 TCEAL9Q9UHQ7 104 aa19.69■□□□□ 0.74
SHTN1-202ENST00000355371 TBC1D2BQ9UPU7 963 aa19.69■□□□□ 0.74
SHTN1-202ENST00000355371 CTDP1Q9Y5B0 961 aaPredicted RBP19.69■□□□□ 0.74
SHTN1-202ENST00000355371 MRE11P49959 708 aa19.68■□□□□ 0.74
SHTN1-202ENST00000355371 CAMSAP2Q08AD1 1489 aa19.68■□□□□ 0.74
SHTN1-202ENST00000355371 KIF6Q6ZMV9 814 aa19.68■□□□□ 0.74
SHTN1-202ENST00000355371 RAD21O60216 631 aa19.68■□□□□ 0.74
SHTN1-202ENST00000355371 LETM1O95202 739 aaPredicted RBP19.67■□□□□ 0.74
SHTN1-202ENST00000355371 GPS2Q13227 327 aa19.67■□□□□ 0.74
SHTN1-202ENST00000355371 XBP1P17861 261 aa19.67■□□□□ 0.74
SHTN1-202ENST00000355371 PCMTD1Q96MG8 357 aaPredicted RBP19.67■□□□□ 0.74
SHTN1-202ENST00000355371 BRMS1Q9HCU9 246 aa19.67■□□□□ 0.74
SHTN1-202ENST00000355371 MBD3O95983 291 aa19.67■□□□□ 0.74
SHTN1-202ENST00000355371 PDCP20941 246 aa19.67■□□□□ 0.74
SHTN1-202ENST00000355371 PTPN23Q9H3S7 1636 aa19.67■□□□□ 0.74
SHTN1-202ENST00000355371 CCAR2Q8N163 923 aaKnown RBP19.66■□□□□ 0.74
SHTN1-202ENST00000355371 ARHGEF11O15085 1522 aa19.66■□□□□ 0.74
SHTN1-202ENST00000355371 NEK4P51957 841 aa19.66■□□□□ 0.74
SHTN1-202ENST00000355371 NAT10Q9H0A0 1025 aaKnown RBP19.66■□□□□ 0.74
SHTN1-202ENST00000355371 C1orf115Q9H7X2 142 aa19.66■□□□□ 0.74
SHTN1-202ENST00000355371 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.66■□□□□ 0.74
SHTN1-202ENST00000355371 RAPGEF3O95398 923 aa19.65■□□□□ 0.74
SHTN1-202ENST00000355371 POGZQ7Z3K3 1410 aa19.65■□□□□ 0.74
SHTN1-202ENST00000355371 SART3Q15020 963 aaKnown RBP19.65■□□□□ 0.74
SHTN1-202ENST00000355371 SRCIN1Q9C0H9 1055 aa19.65■□□□□ 0.74
SHTN1-202ENST00000355371 ZNF592Q92610 1267 aa19.65■□□□□ 0.74
SHTN1-202ENST00000355371 LRRCC1Q9C099 1032 aa19.65■□□□□ 0.74
SHTN1-202ENST00000355371 NSD3Q9BZ95 1437 aa19.64■□□□□ 0.73
SHTN1-202ENST00000355371 ABCC5O15440 1437 aa19.64■□□□□ 0.73
SHTN1-202ENST00000355371 FBXW7Q969H0 707 aa19.64■□□□□ 0.73
SHTN1-202ENST00000355371 TNNT3P45378 269 aaPredicted RBP19.63■□□□□ 0.73
SHTN1-202ENST00000355371 BACH2Q9BYV9 841 aa19.63■□□□□ 0.73
SHTN1-202ENST00000355371 SPG7Q9UQ90 795 aa19.63■□□□□ 0.73
SHTN1-202ENST00000355371 CCDC27Q2M243 656 aa19.63■□□□□ 0.73
SHTN1-202ENST00000355371 ZNF530Q6P9A1 599 aaPredicted RBP19.63■□□□□ 0.73
SHTN1-202ENST00000355371 DNAJC2Q99543 621 aaKnown RBP19.63■□□□□ 0.73
SHTN1-202ENST00000355371 KIF14Q15058 1648 aa19.63■□□□□ 0.73
SHTN1-202ENST00000355371 HOMER1Q86YM7 354 aa19.62■□□□□ 0.73
SHTN1-202ENST00000355371 TRAK2O60296 914 aa19.62■□□□□ 0.73
SHTN1-202ENST00000355371 CWC22Q9HCG8 908 aaKnown RBP19.62■□□□□ 0.73
SHTN1-202ENST00000355371 FOSBP53539 338 aa19.62■□□□□ 0.73
SHTN1-202ENST00000355371 SLFN5Q08AF3 891 aa19.62■□□□□ 0.73
SHTN1-202ENST00000355371 ANKLE2Q86XL3 938 aa19.61■□□□□ 0.73
SHTN1-202ENST00000355371 NASPP49321 788 aaPredicted RBP19.61■□□□□ 0.73
SHTN1-202ENST00000355371 NFE2L2Q16236 605 aa19.61■□□□□ 0.73
SHTN1-202ENST00000355371 PDE4CQ08493 712 aa19.61■□□□□ 0.73
SHTN1-202ENST00000355371 OLFM4Q6UX06 510 aa19.61■□□□□ 0.73
SHTN1-202ENST00000355371 CCDC39Q9UFE4 941 aa19.61■□□□□ 0.73
SHTN1-202ENST00000355371 CCDC158Q5M9N0 1113 aa19.6■□□□□ 0.73
SHTN1-202ENST00000355371 FAM43AQ8N2R8 423 aa19.6■□□□□ 0.73
SHTN1-202ENST00000355371 AMER1Q5JTC6 1135 aaPredicted RBP19.6■□□□□ 0.73
SHTN1-202ENST00000355371 CHD1LQ86WJ1 897 aa19.6■□□□□ 0.73
SHTN1-202ENST00000355371 CABP4P57796 275 aa19.6■□□□□ 0.73
SHTN1-202ENST00000355371 CCDC184Q52MB2 194 aa19.59■□□□□ 0.73
SHTN1-202ENST00000355371 SDF4Q9BRK5 362 aa19.59■□□□□ 0.73
SHTN1-202ENST00000355371 CCDC61Q9Y6R9 512 aa19.59■□□□□ 0.73
SHTN1-202ENST00000355371 ANKRD1Q15327 319 aa19.58■□□□□ 0.73
SHTN1-202ENST00000355371 RBM42Q9BTD8 480 aaKnown RBP19.58■□□□□ 0.73
SHTN1-202ENST00000355371 RPAP2Q8IXW5 612 aaPredicted RBP19.58■□□□□ 0.72
SHTN1-202ENST00000355371 TMPOP42166 694 aaKnown RBP19.58■□□□□ 0.72
SHTN1-202ENST00000355371 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.57■□□□□ 0.723e-7■■□□□ 13.3
SHTN1-202ENST00000355371 TTC39AQ5SRH9 613 aa19.57■□□□□ 0.72
SHTN1-202ENST00000355371 GRIN2AQ12879 1464 aa19.57■□□□□ 0.72
SHTN1-202ENST00000355371 NUDT16Q96DE0 195 aaKnown RBP19.57■□□□□ 0.72
SHTN1-202ENST00000355371 CYP46A1Q9Y6A2 500 aa19.57■□□□□ 0.72
SHTN1-202ENST00000355371 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.57■□□□□ 0.72
SHTN1-202ENST00000355371 SLC3A2P08195 630 aaKnown RBP19.57■□□□□ 0.72
SHTN1-202ENST00000355371 ZNF396Q96N95 335 aaPredicted RBP19.57■□□□□ 0.72
SHTN1-202ENST00000355371 FYB1O15117 783 aa19.56■□□□□ 0.72
SHTN1-202ENST00000355371 PLB1Q6P1J6 1458 aa19.56■□□□□ 0.72
SHTN1-202ENST00000355371 AEBP1Q8IUX7 1158 aa19.56■□□□□ 0.72
SHTN1-202ENST00000355371 RRS1Q15050 365 aaKnown RBP19.55■□□□□ 0.72
SHTN1-202ENST00000355371 GNL3LQ9NVN8 582 aaKnown RBP19.55■□□□□ 0.72
SHTN1-202ENST00000355371 IFT57Q9NWB7 429 aa19.55■□□□□ 0.72
SHTN1-202ENST00000355371 CNNM1Q9NRU3 951 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms