RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 DNAJC2Q99543 621 aaKnown RBP6.88□□□□□ -1.31
SRGAP1-201ENST00000355086 HIP1O00291 1037 aa6.88□□□□□ -1.31
SRGAP1-201ENST00000355086 SERPINC1P01008 464 aa6.88□□□□□ -1.31
SRGAP1-201ENST00000355086 SEPT11Q9NVA2 429 aaKnown RBP6.88□□□□□ -1.31
SRGAP1-201ENST00000355086 HMOX1P09601 288 aa6.88□□□□□ -1.31
SRGAP1-201ENST00000355086 PPFIBP1Q86W92 1011 aa6.87□□□□□ -1.31
SRGAP1-201ENST00000355086 GNL3LQ9NVN8 582 aaKnown RBP6.87□□□□□ -1.31
SRGAP1-201ENST00000355086 SF3B2Q13435 895 aaKnown RBP6.87□□□□□ -1.31
SRGAP1-201ENST00000355086 RABEP1Q15276 862 aa6.87□□□□□ -1.31
SRGAP1-201ENST00000355086 ZNF396Q96N95 335 aaPredicted RBP6.87□□□□□ -1.31
SRGAP1-201ENST00000355086 CEBPZQ03701 1054 aaKnown RBP6.87□□□□□ -1.31
SRGAP1-201ENST00000355086 NLRP2Q9NX02 1062 aa6.87□□□□□ -1.31
SRGAP1-201ENST00000355086 JMYQ8N9B5 988 aa6.87□□□□□ -1.31
SRGAP1-201ENST00000355086 TRIM21P19474 475 aaKnown RBP6.87□□□□□ -1.31
SRGAP1-201ENST00000355086 HMGN5P82970 282 aaKnown RBP6.87□□□□□ -1.31
SRGAP1-201ENST00000355086 CAVIN1Q6NZI2 390 aaKnown RBP6.87□□□□□ -1.31
SRGAP1-201ENST00000355086 STK38Q15208 465 aa6.87□□□□□ -1.31
SRGAP1-201ENST00000355086 CNNM1Q9NRU3 951 aa6.87□□□□□ -1.31
SRGAP1-201ENST00000355086 GNAI1P63096 354 aa6.87□□□□□ -1.31
SRGAP1-201ENST00000355086 SPC24Q8NBT2 197 aa6.87□□□□□ -1.31
SRGAP1-201ENST00000355086 KANK4Q5T7N3 995 aaPredicted RBP6.87□□□□□ -1.31
SRGAP1-201ENST00000355086 IBSPP21815 317 aaPredicted RBP6.87□□□□□ -1.31
SRGAP1-201ENST00000355086 ERC1Q8IUD2 1116 aa6.86□□□□□ -1.31
SRGAP1-201ENST00000355086 RUNDC1Q96C34 613 aa6.86□□□□□ -1.31
SRGAP1-201ENST00000355086 TSPY26PQ9H489 355 aa6.86□□□□□ -1.31
SRGAP1-201ENST00000355086 STK11IPQ8N1F8 1099 aa6.86□□□□□ -1.31
SRGAP1-201ENST00000355086 INCENPQ9NQS7 918 aa6.86□□□□□ -1.31
SRGAP1-201ENST00000355086 DHX37Q8IY37 1157 aaKnown RBP6.86□□□□□ -1.31
SRGAP1-201ENST00000355086 DACH1Q9UI36 760 aa6.86□□□□□ -1.31
SRGAP1-201ENST00000355086 CCDC158Q5M9N0 1113 aa6.86□□□□□ -1.31
SRGAP1-201ENST00000355086 SSR1P43307 286 aaKnown RBP6.86□□□□□ -1.31
SRGAP1-201ENST00000355086 SOGA3Q5TF21 947 aa6.86□□□□□ -1.31
SRGAP1-201ENST00000355086 CDC45O75419 566 aa6.86□□□□□ -1.31
SRGAP1-201ENST00000355086 RBM5P52756 815 aaKnown RBP eCLIP6.86□□□□□ -1.31
SRGAP1-201ENST00000355086 CCDC112Q8NEF3 446 aa6.86□□□□□ -1.31
SRGAP1-201ENST00000355086 DYDC1Q8WWB3 177 aa6.86□□□□□ -1.31
SRGAP1-201ENST00000355086 MCM2P49736 904 aa6.86□□□□□ -1.31
SRGAP1-201ENST00000355086 BMP2KQ9NSY1 1161 aaPredicted RBP6.86□□□□□ -1.31
SRGAP1-201ENST00000355086 ZBED9Q6R2W3 1325 aa6.85□□□□□ -1.31
SRGAP1-201ENST00000355086 MBD3O95983 291 aa6.85□□□□□ -1.31
SRGAP1-201ENST00000355086 KAT6BQ8WYB5 2073 aa6.85□□□□□ -1.31
SRGAP1-201ENST00000355086 TRIM22Q8IYM9 498 aa6.85□□□□□ -1.31
SRGAP1-201ENST00000355086 CCDC30Q5VVM6 783 aa6.85□□□□□ -1.31
SRGAP1-201ENST00000355086 CCDC91Q7Z6B0 441 aa6.85□□□□□ -1.31
SRGAP1-201ENST00000355086 SURF6O75683 361 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-201ENST00000355086 LRRFIP2Q9Y608 721 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-201ENST00000355086 VPS8Q8N3P4 1428 aa6.85□□□□□ -1.31
SRGAP1-201ENST00000355086 EIF3JO75822 258 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-201ENST00000355086 MRE11P49959 708 aa6.85□□□□□ -1.31
SRGAP1-201ENST00000355086 NUTM2GQ5VZR2 741 aa6.85□□□□□ -1.31
SRGAP1-201ENST00000355086 CCDC69A6NI79 296 aa6.85□□□□□ -1.31
SRGAP1-201ENST00000355086 IQCEQ6IPM2 695 aa6.85□□□□□ -1.31
SRGAP1-201ENST00000355086 NACAP1Q9BZK3 213 aa6.85□□□□□ -1.31
SRGAP1-201ENST00000355086 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.85□□□□□ -1.31
SRGAP1-201ENST00000355086 FIBPO43427 364 aa6.84□□□□□ -1.31
SRGAP1-201ENST00000355086 RBM42Q9BTD8 480 aaKnown RBP6.84□□□□□ -1.31
SRGAP1-201ENST00000355086 ANAPC15P60006 121 aa6.84□□□□□ -1.31
SRGAP1-201ENST00000355086 DHX8Q14562 1220 aaKnown RBP6.84□□□□□ -1.31
SRGAP1-201ENST00000355086 ZSCAN29Q8IWY8 852 aaPredicted RBP6.84□□□□□ -1.31
SRGAP1-201ENST00000355086 NUP133Q8WUM0 1156 aa6.84□□□□□ -1.31
SRGAP1-201ENST00000355086 GOLGA6L10A0A0M3HER8 536 aa6.84□□□□□ -1.31
SRGAP1-201ENST00000355086 DNAI2Q9GZS0 605 aa6.84□□□□□ -1.31
SRGAP1-201ENST00000355086 FAM193AP78312 1265 aa6.84□□□□□ -1.32
SRGAP1-201ENST00000355086 SSBP05455 408 aaKnown RBP eCLIP6.84□□□□□ -1.32
SRGAP1-201ENST00000355086 USP47Q96K76 1375 aa6.84□□□□□ -1.32
SRGAP1-201ENST00000355086 CCDC18Q5T9S5 1454 aa6.84□□□□□ -1.32
SRGAP1-201ENST00000355086 FAM177A1Q8N128 213 aaPredicted RBP6.83□□□□□ -1.32
SRGAP1-201ENST00000355086 ANKRD1Q15327 319 aa6.83□□□□□ -1.32
SRGAP1-201ENST00000355086 ZNF76P36508 570 aa6.83□□□□□ -1.32
SRGAP1-201ENST00000355086 TNMDQ9H2S6 317 aa6.83□□□□□ -1.32
SRGAP1-201ENST00000355086 NF2P35240 595 aa6.83□□□□□ -1.32
SRGAP1-201ENST00000355086 JAKMIP3Q5VZ66 844 aa6.83□□□□□ -1.32
SRGAP1-201ENST00000355086 POTEJP0CG39 1038 aa6.83□□□□□ -1.32
SRGAP1-201ENST00000355086 ME1P48163 572 aa6.83□□□□□ -1.32
SRGAP1-201ENST00000355086 MPHOSPH8Q99549 860 aa6.83□□□□□ -1.32
SRGAP1-201ENST00000355086 LRRCC1Q9C099 1032 aa6.83□□□□□ -1.32
SRGAP1-201ENST00000355086 STRN4Q9NRL3 753 aa6.83□□□□□ -1.32
SRGAP1-201ENST00000355086 PRPF40AO75400 957 aaKnown RBP6.83□□□□□ -1.32
SRGAP1-201ENST00000355086 GNAI3P08754 354 aa6.83□□□□□ -1.32
SRGAP1-201ENST00000355086 TAF3Q5VWG9 929 aa6.83□□□□□ -1.32
SRGAP1-201ENST00000355086 NOL7Q9UMY1 257 aaKnown RBP6.83□□□□□ -1.32
SRGAP1-201ENST00000355086 TRAK2O60296 914 aa6.83□□□□□ -1.32
SRGAP1-201ENST00000355086 NEK4P51957 841 aa6.83□□□□□ -1.32
SRGAP1-201ENST00000355086 GAS2L2Q8NHY3 880 aa6.83□□□□□ -1.32
SRGAP1-201ENST00000355086 MIA2Q96PC5 1412 aa6.83□□□□□ -1.32
SRGAP1-201ENST00000355086 STK3Q13188 491 aa6.82□□□□□ -1.32
SRGAP1-201ENST00000355086 CCDC192P0DO97 292 aa6.82□□□□□ -1.32
SRGAP1-201ENST00000355086 CBFA2T2O43439 604 aa6.82□□□□□ -1.32
SRGAP1-201ENST00000355086 NLRP6P59044 892 aa6.82□□□□□ -1.32
SRGAP1-201ENST00000355086 ZNF397Q8NF99 534 aaPredicted RBP6.82□□□□□ -1.32
SRGAP1-201ENST00000355086 STAMBPO95630 424 aa6.82□□□□□ -1.32
SRGAP1-201ENST00000355086 TAF4BQ92750 862 aa6.82□□□□□ -1.32
SRGAP1-201ENST00000355086 ERLIN1O75477 346 aa6.82□□□□□ -1.32
SRGAP1-201ENST00000355086 KIAA1328Q86T90 577 aa6.82□□□□□ -1.32
SRGAP1-201ENST00000355086 USP8P40818 1118 aa6.82□□□□□ -1.32
SRGAP1-201ENST00000355086 SLC26A8Q96RN1 970 aa6.82□□□□□ -1.32
SRGAP1-201ENST00000355086 AEBP1Q8IUX7 1158 aa6.82□□□□□ -1.32
SRGAP1-201ENST00000355086 TMEM87AQ8NBN3 555 aa6.82□□□□□ -1.32
SRGAP1-201ENST00000355086 GNAI2P04899 355 aa6.82□□□□□ -1.32
SRGAP1-201ENST00000355086 AAMPQ13685 434 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms