RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 U2SURPO15042 1029 aaKnown RBP28.71■■■□□ 2.19
NKX2-1-201ENST00000354822 PNPLA6Q8IY17 1366 aa28.71■■■□□ 2.19
NKX2-1-201ENST00000354822 ATP7BP35670 1465 aa28.7■■■□□ 2.19
NKX2-1-201ENST00000354822 SKAP1Q86WV1 359 aa28.7■■■□□ 2.19
NKX2-1-201ENST00000354822 MAPK8IP3Q9UPT6 1336 aa28.69■■■□□ 2.18
NKX2-1-201ENST00000354822 FAM161AQ3B820 660 aa28.69■■■□□ 2.18
NKX2-1-201ENST00000354822 DIAPH1O60610 1272 aaKnown RBP28.68■■■□□ 2.18
NKX2-1-201ENST00000354822 FRAT1Q92837 279 aaPredicted RBP28.68■■■□□ 2.18
NKX2-1-201ENST00000354822 TMEM2Q9UHN6 1383 aa28.68■■■□□ 2.18
NKX2-1-201ENST00000354822 KNDC1Q76NI1 1749 aa28.67■■■□□ 2.18
NKX2-1-201ENST00000354822 TMPOP42166 694 aaKnown RBP28.67■■■□□ 2.18
NKX2-1-201ENST00000354822 PANK1Q8TE04 598 aa28.67■■■□□ 2.18
NKX2-1-201ENST00000354822 WAPLQ7Z5K2 1190 aa28.67■■■□□ 2.18
NKX2-1-201ENST00000354822 COG6Q9Y2V7 657 aa28.67■■■□□ 2.18
NKX2-1-201ENST00000354822 DDRGK1Q96HY6 314 aa28.66■■■□□ 2.18
NKX2-1-201ENST00000354822 METP08581 1390 aa28.66■■■□□ 2.18
NKX2-1-201ENST00000354822 KIF20BQ96Q89 1820 aa28.66■■■□□ 2.18
NKX2-1-201ENST00000354822 IL16Q14005 1332 aa28.66■■■□□ 2.18
NKX2-1-201ENST00000354822 SIRT1Q96EB6 747 aa28.65■■■□□ 2.18
NKX2-1-201ENST00000354822 PMFBP1Q8TBY8 1022 aa28.62■■■□□ 2.17
NKX2-1-201ENST00000354822 IGHDP01880 384 aa28.62■■■□□ 2.17
NKX2-1-201ENST00000354822 TECPR2O15040 1411 aa28.61■■■□□ 2.17
NKX2-1-201ENST00000354822 WASLO00401 505 aaPredicted RBP28.61■■■□□ 2.17
NKX2-1-201ENST00000354822 FCHSD2O94868 740 aa28.61■■■□□ 2.17
NKX2-1-201ENST00000354822 TRIM35Q9UPQ4 493 aa28.61■■■□□ 2.17
NKX2-1-201ENST00000354822 FAM135BQ49AJ0 1406 aa28.6■■■□□ 2.17
NKX2-1-201ENST00000354822 C3P01024 1663 aa28.59■■■□□ 2.17
NKX2-1-201ENST00000354822 C8orf34Q49A92 452 aa28.59■■■□□ 2.17
NKX2-1-201ENST00000354822 CPS1P31327 1500 aa28.59■■■□□ 2.17
NKX2-1-201ENST00000354822 RGS3P49796 1198 aa28.58■■■□□ 2.17
NKX2-1-201ENST00000354822 FER1L4A9Z1Z3 1794 aa28.57■■■□□ 2.16
NKX2-1-201ENST00000354822 CDC42BPGQ6DT37 1551 aa28.57■■■□□ 2.16
NKX2-1-201ENST00000354822 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.57■■■□□ 2.16
NKX2-1-201ENST00000354822 CPSF1Q10570 1443 aaKnown RBP28.56■■■□□ 2.16
NKX2-1-201ENST00000354822 RIPK4P57078 832 aa28.56■■■□□ 2.16
NKX2-1-201ENST00000354822 ZKSCAN2Q63HK3 967 aa28.56■■■□□ 2.16
NKX2-1-201ENST00000354822 EDC4Q6P2E9 1401 aaKnown RBP28.56■■■□□ 2.16
NKX2-1-201ENST00000354822 CEBPAP49715 358 aaPredicted RBP28.55■■■□□ 2.16
NKX2-1-201ENST00000354822 TXNDC2Q86VQ3 553 aa28.55■■■□□ 2.16
NKX2-1-201ENST00000354822 POLKQ9UBT6 870 aa28.55■■■□□ 2.16
NKX2-1-201ENST00000354822 PLEKHG1Q9ULL1 1385 aa28.54■■■□□ 2.16
NKX2-1-201ENST00000354822 NEFMP07197 916 aa28.54■■■□□ 2.16
NKX2-1-201ENST00000354822 ADAMTS13Q76LX8 1427 aa28.54■■■□□ 2.16
NKX2-1-201ENST00000354822 BCL2L13Q9BXK5 485 aa28.54■■■□□ 2.16
NKX2-1-201ENST00000354822 RLBP1P12271 317 aa28.53■■■□□ 2.16
NKX2-1-201ENST00000354822 PPIP5K1Q6PFW1 1433 aa28.53■■■□□ 2.16
NKX2-1-201ENST00000354822 TRHP20396 242 aaPredicted RBP28.52■■■□□ 2.16
NKX2-1-201ENST00000354822 EXOSC9Q06265 439 aaKnown RBP28.52■■■□□ 2.16
NKX2-1-201ENST00000354822 TSR2Q969E8 191 aaKnown RBP28.51■■■□□ 2.16
NKX2-1-201ENST00000354822 CCDC61Q9Y6R9 512 aa28.51■■■□□ 2.15
NKX2-1-201ENST00000354822 MVPQ14764 893 aaKnown RBP28.5■■■□□ 2.15
NKX2-1-201ENST00000354822 DZIP1LQ8IYY4 767 aaKnown RBP28.5■■■□□ 2.15
NKX2-1-201ENST00000354822 NUDT16Q96DE0 195 aaKnown RBP28.5■■■□□ 2.15
NKX2-1-201ENST00000354822 RWDD1Q9H446 243 aaPredicted RBP28.5■■■□□ 2.15
NKX2-1-201ENST00000354822 NBR1Q14596 966 aa28.49■■■□□ 2.15
NKX2-1-201ENST00000354822 LTKP29376 864 aa28.48■■■□□ 2.15
NKX2-1-201ENST00000354822 FTSJ3Q8IY81 847 aaKnown RBP28.48■■■□□ 2.15
NKX2-1-201ENST00000354822 RSPH6AQ9H0K4 717 aa28.48■■■□□ 2.15
NKX2-1-201ENST00000354822 SMC4Q9NTJ3 1288 aa28.48■■■□□ 2.15
NKX2-1-201ENST00000354822 AATKQ6ZMQ8 1374 aa28.48■■■□□ 2.15
NKX2-1-201ENST00000354822 ZNF692Q9BU19 519 aaPredicted RBP28.47■■■□□ 2.15
NKX2-1-201ENST00000354822 PCDHB15Q9Y5E8 787 aa28.47■■■□□ 2.15
NKX2-1-201ENST00000354822 SLIT1O75093 1534 aa28.47■■■□□ 2.15
NKX2-1-201ENST00000354822 PPM1GO15355 546 aaPredicted RBP28.46■■■□□ 2.15
NKX2-1-201ENST00000354822 TNNQ9UQP3 1299 aa28.46■■■□□ 2.15
NKX2-1-201ENST00000354822 ARHGAP23Q9P227 1491 aa28.46■■■□□ 2.15
NKX2-1-201ENST00000354822 EID1Q9Y6B2 187 aa28.45■■■□□ 2.15
NKX2-1-201ENST00000354822 MAP2P11137 1827 aaKnown RBP28.45■■■□□ 2.14
NKX2-1-201ENST00000354822 PRKAR2BP31323 418 aa28.44■■■□□ 2.14
NKX2-1-201ENST00000354822 CALD1Q05682 793 aaKnown RBP28.44■■■□□ 2.14
NKX2-1-201ENST00000354822 RTL5Q5HYW3 569 aaPredicted RBP28.44■■■□□ 2.14
NKX2-1-201ENST00000354822 SSH1Q8WYL5 1049 aa28.44■■■□□ 2.14
NKX2-1-201ENST00000354822 ZNF428Q96B54 188 aa28.44■■■□□ 2.14
NKX2-1-201ENST00000354822 LRRC7Q96NW7 1537 aa28.43■■■□□ 2.14
NKX2-1-201ENST00000354822 ROBO2Q9HCK4 1378 aa28.43■■■□□ 2.14
NKX2-1-201ENST00000354822 COG3Q96JB2 828 aa28.43■■■□□ 2.14
NKX2-1-201ENST00000354822 CDK12Q9NYV4 1490 aaPredicted RBP28.42■■■□□ 2.14
NKX2-1-201ENST00000354822 IPO8O15397 1037 aaKnown RBP28.41■■■□□ 2.14
NKX2-1-201ENST00000354822 ALDH1L2Q3SY69 923 aa28.41■■■□□ 2.14
NKX2-1-201ENST00000354822 ATF7IPQ6VMQ6 1270 aa28.41■■■□□ 2.14
NKX2-1-201ENST00000354822 NFE2L2Q16236 605 aa28.41■■■□□ 2.14
NKX2-1-201ENST00000354822 NME9Q86XW9 330 aa28.41■■■□□ 2.14
NKX2-1-201ENST00000354822 DDX19BQ9UMR2 479 aa28.41■■■□□ 2.14
NKX2-1-201ENST00000354822 IL13P35225 146 aa28.4■■■□□ 2.14
NKX2-1-201ENST00000354822 DAXXQ9UER7 740 aaPredicted RBP28.4■■■□□ 2.14
NKX2-1-201ENST00000354822 KIF16BQ96L93 1317 aa28.4■■■□□ 2.14
NKX2-1-201ENST00000354822 TRIM27P14373 513 aa28.39■■■□□ 2.14
NKX2-1-201ENST00000354822 MON2Q7Z3U7 1717 aa28.39■■■□□ 2.14
NKX2-1-201ENST00000354822 FBLN1P23142 703 aa28.38■■■□□ 2.13
NKX2-1-201ENST00000354822 USP35Q9P2H5 1018 aa28.38■■■□□ 2.13
NKX2-1-201ENST00000354822 EMILIN1Q9Y6C2 1016 aa28.38■■■□□ 2.13
NKX2-1-201ENST00000354822 AKAP12Q02952 1782 aa28.38■■■□□ 2.13
NKX2-1-201ENST00000354822 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.37■■■□□ 2.13
NKX2-1-201ENST00000354822 ITSN1Q15811 1721 aa28.37■■■□□ 2.13
NKX2-1-201ENST00000354822 PLPPR3Q6T4P5 718 aa28.37■■■□□ 2.13
NKX2-1-201ENST00000354822 THEMISQ8N1K5 641 aaPredicted RBP28.37■■■□□ 2.13
NKX2-1-201ENST00000354822 VIRMAQ69YN4 1812 aaKnown RBP28.36■■■□□ 2.13
NKX2-1-201ENST00000354822 BRPF1P55201 1214 aaPredicted RBP28.36■■■□□ 2.13
NKX2-1-201ENST00000354822 NOB1Q9ULX3 412 aaKnown RBP28.36■■■□□ 2.13
NKX2-1-201ENST00000354822 PTPRUQ92729 1446 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms