RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 GLI2P10070 1586 aa14.37□□□□□ -0.11
CAPN9-202ENST00000354537 COL3A1P02461 1466 aaPredicted RBP14.37□□□□□ -0.11
CAPN9-202ENST00000354537 BRPF1P55201 1214 aaPredicted RBP14.37□□□□□ -0.11
CAPN9-202ENST00000354537 ALDH1L2Q3SY69 923 aa14.37□□□□□ -0.11
CAPN9-202ENST00000354537 NPATQ14207 1427 aa14.37□□□□□ -0.11
CAPN9-202ENST00000354537 EIF5BO60841 1220 aaKnown RBP14.37□□□□□ -0.11
CAPN9-202ENST00000354537 TMPOP42166 694 aaKnown RBP14.37□□□□□ -0.11
CAPN9-202ENST00000354537 EXOSC9Q06265 439 aaKnown RBP14.37□□□□□ -0.11
CAPN9-202ENST00000354537 CHMP4BQ9H444 224 aaKnown RBP14.37□□□□□ -0.11
CAPN9-202ENST00000354537 ZBTB40Q9NUA8 1239 aa14.37□□□□□ -0.11
CAPN9-202ENST00000354537 MFAP1P55081 439 aaKnown RBP14.36□□□□□ -0.11
CAPN9-202ENST00000354537 ARHGEF28Q8N1W1 1705 aaKnown RBP14.36□□□□□ -0.11
CAPN9-202ENST00000354537 SSH1Q8WYL5 1049 aa14.36□□□□□ -0.11
CAPN9-202ENST00000354537 CD109Q6YHK3 1445 aa14.36□□□□□ -0.11
CAPN9-202ENST00000354537 NUCB1Q02818 461 aa14.36□□□□□ -0.11
CAPN9-202ENST00000354537 TRIM35Q9UPQ4 493 aa14.36□□□□□ -0.11
CAPN9-202ENST00000354537 SKOR2Q2VWA4 1001 aaPredicted RBP14.35□□□□□ -0.11
CAPN9-202ENST00000354537 ZFYVE9O95405 1425 aa14.35□□□□□ -0.11
CAPN9-202ENST00000354537 PIK3C2BO00750 1634 aa14.34□□□□□ -0.11
CAPN9-202ENST00000354537 VGFO15240 615 aaPredicted RBP14.34□□□□□ -0.11
CAPN9-202ENST00000354537 ITPRIPQ8IWB1 547 aa14.34□□□□□ -0.11
CAPN9-202ENST00000354537 HECW2Q9P2P5 1572 aa14.34□□□□□ -0.11
CAPN9-202ENST00000354537 MLH3Q9UHC1 1453 aa14.34□□□□□ -0.11
CAPN9-202ENST00000354537 REREQ9P2R6 1566 aa14.34□□□□□ -0.11
CAPN9-202ENST00000354537 ANKRD26Q9UPS8 1709 aa14.33□□□□□ -0.12
CAPN9-202ENST00000354537 NOB1Q9ULX3 412 aaKnown RBP14.33□□□□□ -0.12
CAPN9-202ENST00000354537 BMP2KLQ5H9B9 411 aa14.33□□□□□ -0.12
CAPN9-202ENST00000354537 PPIP5K1Q6PFW1 1433 aa14.33□□□□□ -0.12
CAPN9-202ENST00000354537 CHGAP10645 457 aaKnown RBP14.32□□□□□ -0.12
CAPN9-202ENST00000354537 TSR2Q969E8 191 aaKnown RBP14.32□□□□□ -0.12
CAPN9-202ENST00000354537 CDC42BPGQ6DT37 1551 aa14.32□□□□□ -0.12
CAPN9-202ENST00000354537 CFAP74Q9C0B2 1584 aa14.32□□□□□ -0.12
CAPN9-202ENST00000354537 PNPLA6Q8IY17 1366 aa14.32□□□□□ -0.12
CAPN9-202ENST00000354537 TMEM132EQ6IEE7 984 aa14.32□□□□□ -0.12
CAPN9-202ENST00000354537 TMEM57Q8N5G2 664 aa14.32□□□□□ -0.12
CAPN9-202ENST00000354537 GBP4Q96PP9 640 aa14.32□□□□□ -0.12
CAPN9-202ENST00000354537 NEXMIFQ5QGS0 1516 aa14.31□□□□□ -0.12
CAPN9-202ENST00000354537 GCC1Q96CN9 775 aa14.31□□□□□ -0.12
CAPN9-202ENST00000354537 GRPEL1Q9HAV7 217 aa14.31□□□□□ -0.12
CAPN9-202ENST00000354537 ABCC3O15438 1527 aa14.31□□□□□ -0.12
CAPN9-202ENST00000354537 ATAD2Q6PL18 1390 aa14.31□□□□□ -0.12
CAPN9-202ENST00000354537 CHD1LQ86WJ1 897 aa14.31□□□□□ -0.12
CAPN9-202ENST00000354537 ARHGAP45Q92619 1136 aa14.31□□□□□ -0.12
CAPN9-202ENST00000354537 CAMSAP1Q5T5Y3 1602 aa14.3□□□□□ -0.12
CAPN9-202ENST00000354537 FRMPD1Q5SYB0 1578 aa14.3□□□□□ -0.12
CAPN9-202ENST00000354537 A0A1W2PP64 1363 aa14.3□□□□□ -0.12
CAPN9-202ENST00000354537 PIK3R4Q99570 1358 aa14.3□□□□□ -0.12
CAPN9-202ENST00000354537 RAB3GAP1Q15042 981 aa14.3□□□□□ -0.12
CAPN9-202ENST00000354537 CFAP44Q96MT7 982 aa14.3□□□□□ -0.12
CAPN9-202ENST00000354537 SPRYD3Q8NCJ5 442 aa14.29□□□□□ -0.12
CAPN9-202ENST00000354537 TERF2IPQ9NYB0 399 aa14.29□□□□□ -0.12
CAPN9-202ENST00000354537 CLTCQ00610 1675 aaKnown RBP14.29□□□□□ -0.12
CAPN9-202ENST00000354537 CLEC17AQ6ZS10 378 aa14.29□□□□□ -0.12
CAPN9-202ENST00000354537 ARHGAP31Q2M1Z3 1444 aa14.28□□□□□ -0.12
CAPN9-202ENST00000354537 RIPK4P57078 832 aa14.28□□□□□ -0.12
CAPN9-202ENST00000354537 ASXL2Q76L83 1435 aa14.28□□□□□ -0.12
CAPN9-202ENST00000354537 POGZQ7Z3K3 1410 aa14.28□□□□□ -0.12
CAPN9-202ENST00000354537 U2SURPO15042 1029 aaKnown RBP14.27□□□□□ -0.12
CAPN9-202ENST00000354537 FCHSD2O94868 740 aa14.27□□□□□ -0.12
CAPN9-202ENST00000354537 GZF1Q9H116 711 aaPredicted RBP14.27□□□□□ -0.12
CAPN9-202ENST00000354537 DIAPH1O60610 1272 aaKnown RBP14.27□□□□□ -0.13
CAPN9-202ENST00000354537 TNPO1Q92973 898 aaKnown RBP14.27□□□□□ -0.13
CAPN9-202ENST00000354537 PANK2Q9BZ23 570 aa14.27□□□□□ -0.13
CAPN9-202ENST00000354537 CALD1Q05682 793 aaKnown RBP14.26□□□□□ -0.13
CAPN9-202ENST00000354537 CABP2Q9NPB3 220 aa14.26□□□□□ -0.13
CAPN9-202ENST00000354537 HSP90AB1P08238 724 aaKnown RBP14.26□□□□□ -0.13
CAPN9-202ENST00000354537 PTCH1Q13635 1447 aa14.26□□□□□ -0.13
CAPN9-202ENST00000354537 IBTKQ9P2D0 1353 aaPredicted RBP14.25□□□□□ -0.13
CAPN9-202ENST00000354537 FYB1O15117 783 aa14.25□□□□□ -0.13
CAPN9-202ENST00000354537 ESPNB1AK53 854 aa14.24□□□□□ -0.13
CAPN9-202ENST00000354537 ZBTB7BO15156 539 aaPredicted RBP14.24□□□□□ -0.13
CAPN9-202ENST00000354537 KIF2CQ99661 725 aa14.24□□□□□ -0.13
CAPN9-202ENST00000354537 CD163L1Q9NR16 1453 aa14.24□□□□□ -0.13
CAPN9-202ENST00000354537 KIF24Q5T7B8 1368 aa14.24□□□□□ -0.13
CAPN9-202ENST00000354537 K7ELQ4 463 aaPredicted RBP14.23□□□□□ -0.13
CAPN9-202ENST00000354537 FAM135BQ49AJ0 1406 aa14.23□□□□□ -0.13
CAPN9-202ENST00000354537 LNPKQ9C0E8 428 aa14.23□□□□□ -0.13
CAPN9-202ENST00000354537 GLIPR1L2Q4G1C9 344 aa14.22□□□□□ -0.13
CAPN9-202ENST00000354537 GGNBP2Q9H3C7 697 aa14.22□□□□□ -0.13
CAPN9-202ENST00000354537 SLC52A1Q9NWF4 448 aa14.22□□□□□ -0.13
CAPN9-202ENST00000354537 PTPRMP28827 1452 aa14.22□□□□□ -0.13
CAPN9-202ENST00000354537 HDGFL2Q7Z4V5 671 aaPredicted RBP14.22□□□□□ -0.13
CAPN9-202ENST00000354537 MRPL50Q8N5N7 158 aaKnown RBP14.22□□□□□ -0.13
CAPN9-202ENST00000354537 NAP1L5Q96NT1 182 aaPredicted RBP14.22□□□□□ -0.13
CAPN9-202ENST00000354537 SIGLEC1Q9BZZ2 1709 aa14.22□□□□□ -0.13
CAPN9-202ENST00000354537 GOLGA6L22H0YM25 854 aa14.21□□□□□ -0.13
CAPN9-202ENST00000354537 RRP9O43818 475 aaKnown RBP14.21□□□□□ -0.13
CAPN9-202ENST00000354537 SRPK2P78362 688 aaKnown RBP14.21□□□□□ -0.13
CAPN9-202ENST00000354537 GGT6Q6P531 493 aa14.21□□□□□ -0.13
CAPN9-202ENST00000354537 TRIM44Q96DX7 344 aaPredicted RBP14.21□□□□□ -0.13
CAPN9-202ENST00000354537 ABCC4O15439 1325 aa14.2□□□□□ -0.14
CAPN9-202ENST00000354537 VAMP4O75379 141 aa14.2□□□□□ -0.14
CAPN9-202ENST00000354537 HSP90AA1P07900 732 aaKnown RBP14.2□□□□□ -0.14
CAPN9-202ENST00000354537 CCDC173Q0VFZ6 552 aa14.2□□□□□ -0.14
CAPN9-202ENST00000354537 ANKRD45Q5TZF3 282 aa14.2□□□□□ -0.14
CAPN9-202ENST00000354537 PPP1R9BQ96SB3 815 aa14.2□□□□□ -0.14
CAPN9-202ENST00000354537 IFT57Q9NWB7 429 aa14.2□□□□□ -0.14
CAPN9-202ENST00000354537 LRRC7Q96NW7 1537 aa14.2□□□□□ -0.14
CAPN9-202ENST00000354537 CDC45O75419 566 aa14.19□□□□□ -0.14
CAPN9-202ENST00000354537 GNAI1P63096 354 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms