RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 GOLGA2Q08379 1002 aa24.39■■□□□ 1.5
TRIM41-202ENST00000351937 RCAN3Q9UKA8 241 aa24.39■■□□□ 1.49
TRIM41-202ENST00000351937 PNPLA6Q8IY17 1366 aa24.38■■□□□ 1.49
TRIM41-202ENST00000351937 COL3A1P02461 1466 aaPredicted RBP24.38■■□□□ 1.49
TRIM41-202ENST00000351937 NME9Q86XW9 330 aa24.37■■□□□ 1.49
TRIM41-202ENST00000351937 ACEP12821 1306 aa24.36■■□□□ 1.49
TRIM41-202ENST00000351937 U2AF1L5P0DN76 240 aaPredicted RBP24.35■■□□□ 1.49
TRIM41-202ENST00000351937 U2AF1Q01081 240 aaKnown RBP eCLIP24.35■■□□□ 1.49
TRIM41-202ENST00000351937 CHD2O14647 1828 aaKnown RBP24.35■■□□□ 1.49
TRIM41-202ENST00000351937 NUTM2FA1L443 756 aa24.34■■□□□ 1.49
TRIM41-202ENST00000351937 COG3Q96JB2 828 aa24.34■■□□□ 1.49
TRIM41-202ENST00000351937 NPHP4O75161 1426 aaPredicted RBP24.33■■□□□ 1.49
TRIM41-202ENST00000351937 PPP4R2Q9NY27 417 aa24.33■■□□□ 1.49
TRIM41-202ENST00000351937 POLKQ9UBT6 870 aa24.33■■□□□ 1.49
TRIM41-202ENST00000351937 AATKQ6ZMQ8 1374 aa24.33■■□□□ 1.49
TRIM41-202ENST00000351937 NKTRP30414 1462 aaKnown RBP24.33■■□□□ 1.49
TRIM41-202ENST00000351937 DUSP27Q5VZP5 1158 aa24.33■■□□□ 1.48
TRIM41-202ENST00000351937 SLFN5Q08AF3 891 aa24.32■■□□□ 1.48
TRIM41-202ENST00000351937 NCBP3Q53F19 620 aaKnown RBP24.32■■□□□ 1.48
TRIM41-202ENST00000351937 IQSEC2Q5JU85 1478 aa24.32■■□□□ 1.48
TRIM41-202ENST00000351937 ANKARQ7Z5J8 1434 aa24.32■■□□□ 1.48
TRIM41-202ENST00000351937 DIAPH1O60610 1272 aaKnown RBP24.31■■□□□ 1.48
TRIM41-202ENST00000351937 TTC21BQ7Z4L5 1316 aa24.31■■□□□ 1.48
TRIM41-202ENST00000351937 USP6P35125 1406 aa24.31■■□□□ 1.48
TRIM41-202ENST00000351937 NRKQ7Z2Y5 1582 aa24.31■■□□□ 1.48
TRIM41-202ENST00000351937 TRMT2AQ8IZ69 625 aaKnown RBP24.31■■□□□ 1.48
TRIM41-202ENST00000351937 TCP11L2Q8N4U5 519 aa24.31■■□□□ 1.48
TRIM41-202ENST00000351937 RRP1P56182 461 aaKnown RBP24.3■■□□□ 1.48
TRIM41-202ENST00000351937 ZRANB1Q9UGI0 708 aa24.29■■□□□ 1.48
TRIM41-202ENST00000351937 E9PSI1 815 aa24.28■■□□□ 1.48
TRIM41-202ENST00000351937 U2SURPO15042 1029 aaKnown RBP24.28■■□□□ 1.48
TRIM41-202ENST00000351937 WWC1Q8IX03 1113 aa24.28■■□□□ 1.48
TRIM41-202ENST00000351937 CCDC27Q2M243 656 aa24.27■■□□□ 1.48
TRIM41-202ENST00000351937 PHF23Q9BUL5 403 aaPredicted RBP24.27■■□□□ 1.48
TRIM41-202ENST00000351937 SSH2Q76I76 1423 aa24.27■■□□□ 1.48
TRIM41-202ENST00000351937 MAP2P11137 1827 aaKnown RBP24.26■■□□□ 1.47
TRIM41-202ENST00000351937 FBLN1P23142 703 aa24.26■■□□□ 1.47
TRIM41-202ENST00000351937 PNNQ9H307 717 aaKnown RBP24.26■■□□□ 1.47
TRIM41-202ENST00000351937 FMN2Q9NZ56 1722 aa24.25■■□□□ 1.47
TRIM41-202ENST00000351937 PLEKHF1Q96S99 279 aa24.25■■□□□ 1.47
TRIM41-202ENST00000351937 TTC21AQ8NDW8 1320 aa24.24■■□□□ 1.47
TRIM41-202ENST00000351937 CDK12Q9NYV4 1490 aaPredicted RBP24.24■■□□□ 1.47
TRIM41-202ENST00000351937 PPM1GO15355 546 aaPredicted RBP24.24■■□□□ 1.47
TRIM41-202ENST00000351937 PMFBP1Q8TBY8 1022 aa24.24■■□□□ 1.47
TRIM41-202ENST00000351937 NGDNQ8NEJ9 315 aaKnown RBP24.24■■□□□ 1.47
TRIM41-202ENST00000351937 SPINK5Q9NQ38 1064 aaPredicted RBP24.23■■□□□ 1.47
TRIM41-202ENST00000351937 OVOS2A0A0J9YW53 1432 aa24.23■■□□□ 1.47
TRIM41-202ENST00000351937 OVOS2Q6IE36 1432 aa24.23■■□□□ 1.47
TRIM41-202ENST00000351937 EMILIN1Q9Y6C2 1016 aa24.23■■□□□ 1.47
TRIM41-202ENST00000351937 RGPD8O14715 1765 aaPredicted RBP24.22■■□□□ 1.47
TRIM41-202ENST00000351937 NEUROD2Q15784 382 aa24.22■■□□□ 1.47
TRIM41-202ENST00000351937 WDR63Q8IWG1 891 aa24.22■■□□□ 1.47
TRIM41-202ENST00000351937 RRP7AQ9Y3A4 280 aaKnown RBP24.22■■□□□ 1.47
TRIM41-202ENST00000351937 NALCNQ8IZF0 1738 aa24.21■■□□□ 1.47
TRIM41-202ENST00000351937 FCHSD2O94868 740 aa24.2■■□□□ 1.47
TRIM41-202ENST00000351937 DMRT2Q9Y5R5 561 aa24.2■■□□□ 1.46
TRIM41-202ENST00000351937 MAPK8IP3Q9UPT6 1336 aa24.19■■□□□ 1.46
TRIM41-202ENST00000351937 ADGRL3Q9HAR2 1447 aa24.19■■□□□ 1.46
TRIM41-202ENST00000351937 USP31Q70CQ4 1352 aa24.18■■□□□ 1.46
TRIM41-202ENST00000351937 IL13P35225 146 aa24.18■■□□□ 1.46
TRIM41-202ENST00000351937 RRS1Q15050 365 aaKnown RBP24.17■■□□□ 1.46
TRIM41-202ENST00000351937 NWD1Q149M9 1564 aa24.17■■□□□ 1.46
TRIM41-202ENST00000351937 TMPOP42166 694 aaKnown RBP24.16■■□□□ 1.46
TRIM41-202ENST00000351937 RSPH6AQ9H0K4 717 aa24.14■■□□□ 1.45
TRIM41-202ENST00000351937 BCL11AQ9H165 835 aa24.13■■□□□ 1.45
TRIM41-202ENST00000351937 B4GALNT3Q6L9W6 998 aa24.13■■□□□ 1.45
TRIM41-202ENST00000351937 RBM33Q96EV2 1170 aaKnown RBP24.13■■□□□ 1.45
TRIM41-202ENST00000351937 PHF8Q9UPP1 1060 aa24.12■■□□□ 1.45
TRIM41-202ENST00000351937 LRRC7Q96NW7 1537 aa24.12■■□□□ 1.45
TRIM41-202ENST00000351937 NEFMP07197 916 aa24.11■■□□□ 1.45
TRIM41-202ENST00000351937 PRKAR2BP31323 418 aa24.1■■□□□ 1.45
TRIM41-202ENST00000351937 PLIN1O60240 522 aa24.09■■□□□ 1.45
TRIM41-202ENST00000351937 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.09■■□□□ 1.45
TRIM41-202ENST00000351937 C14orf37Q86TY3 774 aa24.09■■□□□ 1.45
TRIM41-202ENST00000351937 MYH16Q9H6N6 1097 aa24.09■■□□□ 1.45
TRIM41-202ENST00000351937 TRIM35Q9UPQ4 493 aa24.09■■□□□ 1.45
TRIM41-202ENST00000351937 PIK3C2AO00443 1686 aa24.08■■□□□ 1.45
TRIM41-202ENST00000351937 RIPK4P57078 832 aa24.07■■□□□ 1.44
TRIM41-202ENST00000351937 EXOC6Q8TAG9 804 aa24.07■■□□□ 1.44
TRIM41-202ENST00000351937 CCDC136Q96JN2 1154 aa24.07■■□□□ 1.44
TRIM41-202ENST00000351937 HMOX1P09601 288 aa24.06■■□□□ 1.44
TRIM41-202ENST00000351937 PROSER2Q86WR7 435 aaPredicted RBP24.06■■□□□ 1.44
TRIM41-202ENST00000351937 IL16Q14005 1332 aa24.06■■□□□ 1.44
TRIM41-202ENST00000351937 NLRP6P59044 892 aa24.05■■□□□ 1.44
TRIM41-202ENST00000351937 EIF4A2Q14240 407 aaKnown RBP24.04■■□□□ 1.44
TRIM41-202ENST00000351937 ESCO1Q5FWF5 840 aa24.04■■□□□ 1.44
TRIM41-202ENST00000351937 ANP32EQ9BTT0 268 aa24.04■■□□□ 1.44
TRIM41-202ENST00000351937 USP54Q70EL1 1684 aa24.04■■□□□ 1.44
TRIM41-202ENST00000351937 PEAK1Q9H792 1746 aa24.03■■□□□ 1.44
TRIM41-202ENST00000351937 MAP3K19Q56UN5 1328 aa24.02■■□□□ 1.44
TRIM41-202ENST00000351937 NFE2L2Q16236 605 aa24.02■■□□□ 1.44
TRIM41-202ENST00000351937 ABTB2Q8N961 1025 aa24.02■■□□□ 1.44
TRIM41-202ENST00000351937 SBNO1A3KN83 1393 aa24.02■■□□□ 1.44
TRIM41-202ENST00000351937 PHACTR3Q96KR7 559 aa24.02■■□□□ 1.44
TRIM41-202ENST00000351937 RBM19Q9Y4C8 960 aaKnown RBP24.02■■□□□ 1.44
TRIM41-202ENST00000351937 SOX12O15370 315 aa24.01■■□□□ 1.43
TRIM41-202ENST00000351937 PAK3O75914 559 aaPredicted RBP24.01■■□□□ 1.43
TRIM41-202ENST00000351937 HSP90AB2PQ58FF8 381 aa24.01■■□□□ 1.43
TRIM41-202ENST00000351937 FLT4P35916 1363 aa24■■□□□ 1.43
TRIM41-202ENST00000351937 C19orf44Q9H6X5 657 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms