RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 HAP1P54257 671 aaPredicted RBP13.21□□□□□ -0.29
SMPD4-201ENST00000351288 SULT6B1Q6IMI4 303 aa13.21□□□□□ -0.29
SMPD4-201ENST00000351288 PNNQ9H307 717 aaKnown RBP13.21□□□□□ -0.3
SMPD4-201ENST00000351288 PDZRN3Q9UPQ7 1066 aa13.21□□□□□ -0.3
SMPD4-201ENST00000351288 CCDC61Q9Y6R9 512 aa13.21□□□□□ -0.3
SMPD4-201ENST00000351288 FRAT2O75474 233 aaPredicted RBP13.2□□□□□ -0.3
SMPD4-201ENST00000351288 DDRGK1Q96HY6 314 aa13.2□□□□□ -0.3
SMPD4-201ENST00000351288 QRICH2Q9H0J4 1663 aa13.2□□□□□ -0.3
SMPD4-201ENST00000351288 MIS18AQ9NYP9 233 aa13.2□□□□□ -0.3
SMPD4-201ENST00000351288 ADGRB3O60242 1522 aa13.2□□□□□ -0.3
SMPD4-201ENST00000351288 TMPOP42166 694 aaKnown RBP13.2□□□□□ -0.3
SMPD4-201ENST00000351288 SSH1Q8WYL5 1049 aa13.2□□□□□ -0.3
SMPD4-201ENST00000351288 PDE3AQ14432 1141 aa13.19□□□□□ -0.3
SMPD4-201ENST00000351288 C1orf115Q9H7X2 142 aa13.19□□□□□ -0.3
SMPD4-201ENST00000351288 AMOTL2Q9Y2J4 779 aa13.19□□□□□ -0.3
SMPD4-201ENST00000351288 FAM83GA6ND36 823 aa13.19□□□□□ -0.3
SMPD4-201ENST00000351288 WASLO00401 505 aaPredicted RBP13.19□□□□□ -0.3
SMPD4-201ENST00000351288 ABCC3O15438 1527 aa13.19□□□□□ -0.3
SMPD4-201ENST00000351288 ZKSCAN2Q63HK3 967 aa13.18□□□□□ -0.3
SMPD4-201ENST00000351288 ADGRB1O14514 1584 aa13.18□□□□□ -0.3
SMPD4-201ENST00000351288 HSP90AA1P07900 732 aaKnown RBP13.18□□□□□ -0.3
SMPD4-201ENST00000351288 NOB1Q9ULX3 412 aaKnown RBP13.18□□□□□ -0.3
SMPD4-201ENST00000351288 SIGLEC1Q9BZZ2 1709 aa13.18□□□□□ -0.3
SMPD4-201ENST00000351288 ABTB2Q8N961 1025 aa13.17□□□□□ -0.3
SMPD4-201ENST00000351288 TRIM35Q9UPQ4 493 aa13.17□□□□□ -0.3
SMPD4-201ENST00000351288 ANKRD36BQ8N2N9 1353 aa13.17□□□□□ -0.3
SMPD4-201ENST00000351288 TULP4Q9NRJ4 1543 aa13.17□□□□□ -0.3
SMPD4-201ENST00000351288 ZMYM3Q14202 1370 aa13.17□□□□□ -0.3
SMPD4-201ENST00000351288 TRIM27P14373 513 aa13.17□□□□□ -0.3
SMPD4-201ENST00000351288 ESCO1Q5FWF5 840 aa13.17□□□□□ -0.3
SMPD4-201ENST00000351288 DZIP1LQ8IYY4 767 aaKnown RBP13.17□□□□□ -0.3
SMPD4-201ENST00000351288 PSME1Q06323 249 aa13.16□□□□□ -0.3
SMPD4-201ENST00000351288 PHACTR3Q96KR7 559 aa13.16□□□□□ -0.3
SMPD4-201ENST00000351288 SBNO2Q9Y2G9 1366 aa13.16□□□□□ -0.3
SMPD4-201ENST00000351288 ATAD2Q6PL18 1390 aa13.16□□□□□ -0.3
SMPD4-201ENST00000351288 NRXN1Q9ULB1 1477 aa13.16□□□□□ -0.3
SMPD4-201ENST00000351288 WDR63Q8IWG1 891 aa13.16□□□□□ -0.3
SMPD4-201ENST00000351288 GLI2P10070 1586 aa13.16□□□□□ -0.3
SMPD4-201ENST00000351288 HECW2Q9P2P5 1572 aa13.15□□□□□ -0.3
SMPD4-201ENST00000351288 MFAP1P55081 439 aaKnown RBP13.15□□□□□ -0.3
SMPD4-201ENST00000351288 MLH3Q9UHC1 1453 aa13.15□□□□□ -0.3
SMPD4-201ENST00000351288 MCM10Q7L590 875 aa13.15□□□□□ -0.31
SMPD4-201ENST00000351288 THEMISQ8N1K5 641 aaPredicted RBP13.15□□□□□ -0.31
SMPD4-201ENST00000351288 IPO8O15397 1037 aaKnown RBP13.14□□□□□ -0.31
SMPD4-201ENST00000351288 TMEM57Q8N5G2 664 aa13.14□□□□□ -0.31
SMPD4-201ENST00000351288 RWDD1Q9H446 243 aaPredicted RBP13.14□□□□□ -0.31
SMPD4-201ENST00000351288 PPLO60437 1756 aa13.14□□□□□ -0.31
SMPD4-201ENST00000351288 RIMS2Q9UQ26 1411 aa13.14□□□□□ -0.31
SMPD4-201ENST00000351288 IFT172Q9UG01 1749 aa13.14□□□□□ -0.31
SMPD4-201ENST00000351288 KIAA1210Q9ULL0 1709 aa13.14□□□□□ -0.31
SMPD4-201ENST00000351288 USHBP1Q8N6Y0 703 aa13.14□□□□□ -0.31
SMPD4-201ENST00000351288 MVPQ14764 893 aaKnown RBP13.14□□□□□ -0.31
SMPD4-201ENST00000351288 AEBP1Q8IUX7 1158 aa13.14□□□□□ -0.31
SMPD4-201ENST00000351288 USP19O94966 1318 aa13.13□□□□□ -0.31
SMPD4-201ENST00000351288 LTKP29376 864 aa13.13□□□□□ -0.31
SMPD4-201ENST00000351288 HSP90AB2PQ58FF8 381 aa13.13□□□□□ -0.31
SMPD4-201ENST00000351288 BRPF3Q9ULD4 1205 aa13.13□□□□□ -0.31
SMPD4-201ENST00000351288 CAMSAP1Q5T5Y3 1602 aa13.13□□□□□ -0.31
SMPD4-201ENST00000351288 CSB-PGBD3P0DP91 1061 aa13.13□□□□□ -0.31
SMPD4-201ENST00000351288 LNPKQ9C0E8 428 aa13.13□□□□□ -0.31
SMPD4-201ENST00000351288 MYO5BQ9ULV0 1848 aa13.13□□□□□ -0.31
SMPD4-201ENST00000351288 EIF2S2P20042 333 aaKnown RBP13.12□□□□□ -0.31
SMPD4-201ENST00000351288 PLEKHF1Q96S99 279 aa13.12□□□□□ -0.31
SMPD4-201ENST00000351288 TSPYL6Q8N831 410 aa13.12□□□□□ -0.31
SMPD4-201ENST00000351288 SHPRHQ149N8 1683 aa13.12□□□□□ -0.31
SMPD4-201ENST00000351288 ACEP12821 1306 aa13.12□□□□□ -0.31
SMPD4-201ENST00000351288 TNRQ92752 1358 aa13.12□□□□□ -0.31
SMPD4-201ENST00000351288 YTHDC2Q9H6S0 1430 aaKnown RBP13.12□□□□□ -0.31
SMPD4-201ENST00000351288 PHF23Q9BUL5 403 aaPredicted RBP13.11□□□□□ -0.31
SMPD4-201ENST00000351288 POLKQ9UBT6 870 aa13.11□□□□□ -0.31
SMPD4-201ENST00000351288 FOXO3O43524 673 aa13.11□□□□□ -0.31
SMPD4-201ENST00000351288 ANKRD45Q5TZF3 282 aa13.11□□□□□ -0.31
SMPD4-201ENST00000351288 NEXMIFQ5QGS0 1516 aa13.1□□□□□ -0.31
SMPD4-201ENST00000351288 LMTK2Q8IWU2 1503 aa13.1□□□□□ -0.31
SMPD4-201ENST00000351288 KRT24Q2M2I5 525 aa13.1□□□□□ -0.31
SMPD4-201ENST00000351288 ATF7IPQ6VMQ6 1270 aa13.09□□□□□ -0.31
SMPD4-201ENST00000351288 NEO1Q92859 1461 aa13.09□□□□□ -0.31
SMPD4-201ENST00000351288 ABCC11Q96J66 1382 aa13.08□□□□□ -0.31
SMPD4-201ENST00000351288 TPRNQ4KMQ1 711 aa13.08□□□□□ -0.32
SMPD4-201ENST00000351288 NGEFQ8N5V2 710 aa13.08□□□□□ -0.32
SMPD4-201ENST00000351288 ZNF330Q9Y3S2 320 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-201ENST00000351288 TWISTNBQ3B726 338 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-201ENST00000351288 DIP2CQ9Y2E4 1556 aa13.08□□□□□ -0.32
SMPD4-201ENST00000351288 METP08581 1390 aa13.08□□□□□ -0.32
SMPD4-201ENST00000351288 TSPYL4Q9UJ04 414 aa13.08□□□□□ -0.32
SMPD4-201ENST00000351288 SETBP1Q9Y6X0 1596 aa13.07□□□□□ -0.32
SMPD4-201ENST00000351288 KCNA6P17658 529 aa13.07□□□□□ -0.32
SMPD4-201ENST00000351288 CALD1Q05682 793 aaKnown RBP13.07□□□□□ -0.32
SMPD4-201ENST00000351288 PROSER2Q86WR7 435 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-201ENST00000351288 FOXD4L1Q9NU39 408 aa13.07□□□□□ -0.32
SMPD4-201ENST00000351288 IQSEC2Q5JU85 1478 aa13.07□□□□□ -0.32
SMPD4-201ENST00000351288 GSE1Q14687 1217 aa13.07□□□□□ -0.32
SMPD4-201ENST00000351288 PIK3C2BO00750 1634 aa13.07□□□□□ -0.32
SMPD4-201ENST00000351288 ARHGEF28Q8N1W1 1705 aaKnown RBP13.07□□□□□ -0.32
SMPD4-201ENST00000351288 ZC3H6P61129 1189 aaKnown RBP13.06□□□□□ -0.32
SMPD4-201ENST00000351288 CCDC27Q2M243 656 aa13.06□□□□□ -0.32
SMPD4-201ENST00000351288 GZF1Q9H116 711 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-201ENST00000351288 PPIP5K1Q6PFW1 1433 aa13.06□□□□□ -0.32
SMPD4-201ENST00000351288 FCHSD2O94868 740 aa13.06□□□□□ -0.32
SMPD4-201ENST00000351288 ANKLE2Q86XL3 938 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms