RNA–Protein interactions for RNA: ENST00000351266.8

CNTFR-201, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-201ENST00000351266 THEMISQ8N1K5 641 aaPredicted RBP29.79■■■□□ 2.36
CNTFR-201ENST00000351266 ZNF692Q9BU19 519 aaPredicted RBP29.78■■■□□ 2.36
CNTFR-201ENST00000351266 DIAPH1O60610 1272 aaKnown RBP29.77■■■□□ 2.36
CNTFR-201ENST00000351266 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.77■■■□□ 2.36
CNTFR-201ENST00000351266 NEUROD2Q15784 382 aa29.76■■■□□ 2.35
CNTFR-201ENST00000351266 DMRT2Q9Y5R5 561 aa29.76■■■□□ 2.35
CNTFR-201ENST00000351266 U2SURPO15042 1029 aaKnown RBP29.75■■■□□ 2.35
CNTFR-201ENST00000351266 DIP2AQ14689 1571 aa29.75■■■□□ 2.35
CNTFR-201ENST00000351266 RRP7AQ9Y3A4 280 aaKnown RBP29.75■■■□□ 2.35
CNTFR-201ENST00000351266 TBX22Q9Y458 520 aa29.75■■■□□ 2.35
CNTFR-201ENST00000351266 MON2Q7Z3U7 1717 aa29.74■■■□□ 2.35
CNTFR-201ENST00000351266 MAPK8IP3Q9UPT6 1336 aa29.73■■■□□ 2.35
CNTFR-201ENST00000351266 PLEKHF1Q96S99 279 aa29.72■■■□□ 2.35
CNTFR-201ENST00000351266 MYH16Q9H6N6 1097 aa29.72■■■□□ 2.35
CNTFR-201ENST00000351266 ITSN1Q15811 1721 aa29.71■■■□□ 2.35
CNTFR-201ENST00000351266 AATKQ6ZMQ8 1374 aa29.71■■■□□ 2.35
CNTFR-201ENST00000351266 AKAP12Q02952 1782 aa29.71■■■□□ 2.35
CNTFR-201ENST00000351266 C20orf194Q5TEA3 1177 aa29.69■■■□□ 2.34
CNTFR-201ENST00000351266 FANCIQ9NVI1 1328 aa29.69■■■□□ 2.34
CNTFR-201ENST00000351266 POLKQ9UBT6 870 aa29.69■■■□□ 2.34
CNTFR-201ENST00000351266 PTCH1Q13635 1447 aa29.68■■■□□ 2.34
CNTFR-201ENST00000351266 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.68■■■□□ 2.34
CNTFR-201ENST00000351266 COG3Q96JB2 828 aa29.67■■■□□ 2.34
CNTFR-201ENST00000351266 PRR36Q9H6K5 1346 aa29.66■■■□□ 2.34
CNTFR-201ENST00000351266 PTPRUQ92729 1446 aa29.66■■■□□ 2.34
CNTFR-201ENST00000351266 FCHSD2O94868 740 aa29.66■■■□□ 2.34
CNTFR-201ENST00000351266 SLC26A8Q96RN1 970 aa29.66■■■□□ 2.34
CNTFR-201ENST00000351266 TMPOP42166 694 aaKnown RBP29.65■■■□□ 2.34
CNTFR-201ENST00000351266 PDE3AQ14432 1141 aa29.65■■■□□ 2.34
CNTFR-201ENST00000351266 TOPAZ1Q8N9V7 1692 aa29.65■■■□□ 2.34
CNTFR-201ENST00000351266 CDK12Q9NYV4 1490 aaPredicted RBP29.64■■■□□ 2.34
CNTFR-201ENST00000351266 TCERG1O14776 1098 aaKnown RBP29.64■■■□□ 2.34
CNTFR-201ENST00000351266 NME9Q86XW9 330 aa29.64■■■□□ 2.34
CNTFR-201ENST00000351266 DNAJC5Q9H3Z4 198 aa29.64■■■□□ 2.34
CNTFR-201ENST00000351266 AMOTL2Q9Y2J4 779 aa29.64■■■□□ 2.34
CNTFR-201ENST00000351266 PLEKHG3A1L390 1219 aa29.63■■■□□ 2.33
CNTFR-201ENST00000351266 BCAR3O75815 825 aa29.63■■■□□ 2.33
CNTFR-201ENST00000351266 CT47B1P0C2W7 299 aaPredicted RBP29.63■■■□□ 2.33
CNTFR-201ENST00000351266 NEFMP07197 916 aa29.63■■■□□ 2.33
CNTFR-201ENST00000351266 IL16Q14005 1332 aa29.62■■■□□ 2.33
CNTFR-201ENST00000351266 PLPPR3Q6T4P5 718 aa29.61■■■□□ 2.33
CNTFR-201ENST00000351266 NCKAP5LQ9HCH0 1330 aa29.59■■■□□ 2.33
CNTFR-201ENST00000351266 CEP170BQ9Y4F5 1589 aaPredicted RBP29.59■■■□□ 2.33
CNTFR-201ENST00000351266 MAP2P11137 1827 aaKnown RBP29.59■■■□□ 2.33
CNTFR-201ENST00000351266 PIK3R4Q99570 1358 aa29.59■■■□□ 2.33
CNTFR-201ENST00000351266 PPM1GO15355 546 aaPredicted RBP29.58■■■□□ 2.33
CNTFR-201ENST00000351266 CANXP27824 592 aaKnown RBP29.58■■■□□ 2.33
CNTFR-201ENST00000351266 RARSP54136 660 aaKnown RBP29.57■■■□□ 2.32
CNTFR-201ENST00000351266 CENPQQ7L2Z9 268 aaPredicted RBP29.57■■■□□ 2.32
CNTFR-201ENST00000351266 MS4A1P11836 297 aa29.57■■■□□ 2.32
CNTFR-201ENST00000351266 NRKQ7Z2Y5 1582 aa29.56■■■□□ 2.32
CNTFR-201ENST00000351266 TRIM35Q9UPQ4 493 aa29.56■■■□□ 2.32
CNTFR-201ENST00000351266 LRRC7Q96NW7 1537 aa29.55■■■□□ 2.32
CNTFR-201ENST00000351266 ACEP12821 1306 aa29.55■■■□□ 2.32
CNTFR-201ENST00000351266 TTC21BQ7Z4L5 1316 aa29.55■■■□□ 2.32
CNTFR-201ENST00000351266 RIPK4P57078 832 aa29.55■■■□□ 2.32
CNTFR-201ENST00000351266 RSPH6AQ9H0K4 717 aa29.55■■■□□ 2.32
CNTFR-201ENST00000351266 AAMPQ13685 434 aa29.54■■■□□ 2.32
CNTFR-201ENST00000351266 XRN1Q8IZH2 1706 aaKnown RBP29.53■■■□□ 2.32
CNTFR-201ENST00000351266 KDM2BQ8NHM5 1336 aa29.53■■■□□ 2.32
CNTFR-201ENST00000351266 EMILIN1Q9Y6C2 1016 aa29.53■■■□□ 2.32
CNTFR-201ENST00000351266 USP6P35125 1406 aa29.53■■■□□ 2.32
CNTFR-201ENST00000351266 IL13P35225 146 aa29.52■■■□□ 2.32
CNTFR-201ENST00000351266 RIMS1Q86UR5 1692 aaKnown RBP29.51■■■□□ 2.31
CNTFR-201ENST00000351266 PRKAR2BP31323 418 aa29.5■■■□□ 2.31
CNTFR-201ENST00000351266 ZRANB1Q9UGI0 708 aa29.5■■■□□ 2.31
CNTFR-201ENST00000351266 FBLN1P23142 703 aa29.49■■■□□ 2.31
CNTFR-201ENST00000351266 TTC21AQ8NDW8 1320 aa29.48■■■□□ 2.31
CNTFR-201ENST00000351266 OVOS2A0A0J9YW53 1432 aa29.48■■■□□ 2.31
CNTFR-201ENST00000351266 OVOS2Q6IE36 1432 aa29.48■■■□□ 2.31
CNTFR-201ENST00000351266 CALD1Q05682 793 aaKnown RBP29.47■■■□□ 2.31
CNTFR-201ENST00000351266 ANKARQ7Z5J8 1434 aa29.46■■■□□ 2.31
CNTFR-201ENST00000351266 ZNF142P52746 1687 aaPredicted RBP29.45■■■□□ 2.31
CNTFR-201ENST00000351266 SSH2Q76I76 1423 aa29.45■■■□□ 2.31
CNTFR-201ENST00000351266 NFE2L2Q16236 605 aa29.45■■■□□ 2.3
CNTFR-201ENST00000351266 FRAT1Q92837 279 aaPredicted RBP29.45■■■□□ 2.3
CNTFR-201ENST00000351266 ANKLE2Q86XL3 938 aa29.43■■■□□ 2.3
CNTFR-201ENST00000351266 RRS1Q15050 365 aaKnown RBP29.43■■■□□ 2.3
CNTFR-201ENST00000351266 USP31Q70CQ4 1352 aa29.42■■■□□ 2.3
CNTFR-201ENST00000351266 NUTM2FA1L443 756 aa29.42■■■□□ 2.3
CNTFR-201ENST00000351266 NALCNQ8IZF0 1738 aa29.42■■■□□ 2.3
CNTFR-201ENST00000351266 ADAMTSL3P82987 1691 aa29.41■■■□□ 2.3
CNTFR-201ENST00000351266 EXOSC9Q06265 439 aaKnown RBP29.41■■■□□ 2.3
CNTFR-201ENST00000351266 LMOD3Q0VAK6 560 aa29.41■■■□□ 2.3
CNTFR-201ENST00000351266 TSR2Q969E8 191 aaKnown RBP29.41■■■□□ 2.3
CNTFR-201ENST00000351266 HMOX1P09601 288 aa29.4■■■□□ 2.3
CNTFR-201ENST00000351266 CLUAP1Q96AJ1 413 aa29.4■■■□□ 2.3
CNTFR-201ENST00000351266 PANK1Q8TE04 598 aa29.39■■■□□ 2.3
CNTFR-201ENST00000351266 COG6Q9Y2V7 657 aa29.38■■■□□ 2.29
CNTFR-201ENST00000351266 KCNA6P17658 529 aa29.37■■■□□ 2.29
CNTFR-201ENST00000351266 ZKSCAN2Q63HK3 967 aa29.37■■■□□ 2.29
CNTFR-201ENST00000351266 NGDNQ8NEJ9 315 aaKnown RBP29.37■■■□□ 2.29
CNTFR-201ENST00000351266 ZNF428Q96B54 188 aa29.37■■■□□ 2.29
CNTFR-201ENST00000351266 PHACTR3Q96KR7 559 aa29.35■■■□□ 2.29
CNTFR-201ENST00000351266 PDE4AP27815 886 aa29.34■■■□□ 2.29
CNTFR-201ENST00000351266 PMFBP1Q8TBY8 1022 aa29.33■■■□□ 2.29
CNTFR-201ENST00000351266 BCL2L13Q9BXK5 485 aa29.33■■■□□ 2.29
CNTFR-201ENST00000351266 SMC4Q9NTJ3 1288 aa29.33■■■□□ 2.29
CNTFR-201ENST00000351266 FMN2Q9NZ56 1722 aa29.33■■■□□ 2.29
CNTFR-201ENST00000351266 ANP32AP39687 249 aaKnown RBP29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms