RNA–Protein interactions for RNA: ENST00000349736.9

CSNK2A1-202, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-202ENST00000349736 ATP7AQ04656 1500 aa11.87□□□□□ -0.51
CSNK2A1-202ENST00000349736 PDE3AQ14432 1141 aa11.86□□□□□ -0.51
CSNK2A1-202ENST00000349736 ANXA1P04083 346 aa11.86□□□□□ -0.51
CSNK2A1-202ENST00000349736 GNAI1P63096 354 aa11.86□□□□□ -0.51
CSNK2A1-202ENST00000349736 NFKBIBQ15653 356 aa11.86□□□□□ -0.51
CSNK2A1-202ENST00000349736 WDR63Q8IWG1 891 aa11.86□□□□□ -0.51
CSNK2A1-202ENST00000349736 KDM5CP41229 1560 aa11.86□□□□□ -0.51
CSNK2A1-202ENST00000349736 SMARCA5O60264 1052 aaPredicted RBP11.86□□□□□ -0.51
CSNK2A1-202ENST00000349736 CALD1Q05682 793 aaKnown RBP11.86□□□□□ -0.51
CSNK2A1-202ENST00000349736 ACEP12821 1306 aa11.85□□□□□ -0.51
CSNK2A1-202ENST00000349736 TSHZ3Q63HK5 1081 aa11.84□□□□□ -0.51
CSNK2A1-202ENST00000349736 ASXL1Q8IXJ9 1541 aa11.84□□□□□ -0.51
CSNK2A1-202ENST00000349736 C8orf58Q8NAV2 365 aa11.84□□□□□ -0.51
CSNK2A1-202ENST00000349736 ATAD2Q6PL18 1390 aa11.84□□□□□ -0.51
CSNK2A1-202ENST00000349736 CHMP3Q9Y3E7 222 aa11.84□□□□□ -0.51
CSNK2A1-202ENST00000349736 NFE2L2Q16236 605 aa11.83□□□□□ -0.51
CSNK2A1-202ENST00000349736 NKTRP30414 1462 aaKnown RBP11.83□□□□□ -0.52
CSNK2A1-202ENST00000349736 FCHSD2O94868 740 aa11.83□□□□□ -0.52
CSNK2A1-202ENST00000349736 TEFQ10587 303 aa11.83□□□□□ -0.52
CSNK2A1-202ENST00000349736 NLRP2Q9NX02 1062 aa11.83□□□□□ -0.52
CSNK2A1-202ENST00000349736 MAP4K4O95819 1239 aaPredicted RBP11.83□□□□□ -0.52
CSNK2A1-202ENST00000349736 LMOD3Q0VAK6 560 aa11.83□□□□□ -0.52
CSNK2A1-202ENST00000349736 MBIPQ9NS73 344 aa11.83□□□□□ -0.52
CSNK2A1-202ENST00000349736 C22orf23Q9BZE7 217 aa11.82□□□□□ -0.52
CSNK2A1-202ENST00000349736 MAST1Q9Y2H9 1570 aa11.82□□□□□ -0.52
CSNK2A1-202ENST00000349736 LTKP29376 864 aa11.82□□□□□ -0.52
CSNK2A1-202ENST00000349736 ZCCHC11Q5TAX3 1644 aaKnown RBP11.81□□□□□ -0.52
CSNK2A1-202ENST00000349736 EXOC6BQ9Y2D4 811 aa11.81□□□□□ -0.52
CSNK2A1-202ENST00000349736 CDC42BPBQ9Y5S2 1711 aa11.8□□□□□ -0.52
CSNK2A1-202ENST00000349736 KCNJ4P48050 445 aa11.8□□□□□ -0.52
CSNK2A1-202ENST00000349736 KIF16BQ96L93 1317 aa11.8□□□□□ -0.52
CSNK2A1-202ENST00000349736 ADGBQ8N7X0 1667 aa11.8□□□□□ -0.52
CSNK2A1-202ENST00000349736 PROSER2Q86WR7 435 aaPredicted RBP11.8□□□□□ -0.52
CSNK2A1-202ENST00000349736 THEMISQ8N1K5 641 aaPredicted RBP11.8□□□□□ -0.52
CSNK2A1-202ENST00000349736 NAP1L2Q9ULW6 460 aaPredicted RBP11.8□□□□□ -0.52
CSNK2A1-202ENST00000349736 TRIM35Q9UPQ4 493 aa11.8□□□□□ -0.52
CSNK2A1-202ENST00000349736 PRDM15P57071 1507 aaPredicted RBP11.8□□□□□ -0.52
CSNK2A1-202ENST00000349736 KDM5DQ9BY66 1539 aa11.8□□□□□ -0.52
CSNK2A1-202ENST00000349736 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.8□□□□□ -0.52
CSNK2A1-202ENST00000349736 PTPRTO14522 1441 aa11.79□□□□□ -0.52
CSNK2A1-202ENST00000349736 C16orf71Q8IYS4 520 aaPredicted RBP11.79□□□□□ -0.52
CSNK2A1-202ENST00000349736 IL1RAPL2Q9NP60 686 aa11.79□□□□□ -0.52
CSNK2A1-202ENST00000349736 ANKRD36BQ8N2N9 1353 aa11.79□□□□□ -0.52
CSNK2A1-202ENST00000349736 ARHGEF5Q12774 1597 aa11.79□□□□□ -0.52
CSNK2A1-202ENST00000349736 RNF123Q5XPI4 1314 aa11.79□□□□□ -0.52
CSNK2A1-202ENST00000349736 CASC1Q6TDU7 716 aa11.79□□□□□ -0.52
CSNK2A1-202ENST00000349736 IL27Q8NEV9 243 aa11.79□□□□□ -0.52
CSNK2A1-202ENST00000349736 ZMYM3Q14202 1370 aa11.78□□□□□ -0.52
CSNK2A1-202ENST00000349736 KCNA6P17658 529 aa11.78□□□□□ -0.52
CSNK2A1-202ENST00000349736 PIP4K2AP48426 406 aaPredicted RBP11.78□□□□□ -0.52
CSNK2A1-202ENST00000349736 C8orf34Q49A92 452 aa11.78□□□□□ -0.52
CSNK2A1-202ENST00000349736 MPRIPQ6WCQ1 1025 aa11.78□□□□□ -0.52
CSNK2A1-202ENST00000349736 DDX17Q92841 729 aaKnown RBP11.78□□□□□ -0.52
CSNK2A1-202ENST00000349736 PREX2Q70Z35 1606 aa11.78□□□□□ -0.52
CSNK2A1-202ENST00000349736 MYO5CQ9NQX4 1742 aa11.78□□□□□ -0.52
CSNK2A1-202ENST00000349736 EIF4A2Q14240 407 aaKnown RBP11.78□□□□□ -0.52
CSNK2A1-202ENST00000349736 JARID2Q92833 1246 aaPredicted RBP11.78□□□□□ -0.52
CSNK2A1-202ENST00000349736 DTNBO60941 627 aa11.77□□□□□ -0.52
CSNK2A1-202ENST00000349736 PLCB2Q00722 1185 aa11.77□□□□□ -0.52
CSNK2A1-202ENST00000349736 ABCC1P33527 1531 aa11.77□□□□□ -0.52
CSNK2A1-202ENST00000349736 LRRC59Q96AG4 307 aaKnown RBP11.77□□□□□ -0.52
CSNK2A1-202ENST00000349736 ZNF692Q9BU19 519 aaPredicted RBP11.77□□□□□ -0.52
CSNK2A1-202ENST00000349736 API5Q9BZZ5 524 aaKnown RBP11.77□□□□□ -0.52
CSNK2A1-202ENST00000349736 BRPF3Q9ULD4 1205 aa11.77□□□□□ -0.52
CSNK2A1-202ENST00000349736 ERVK-7P63135 1459 aa11.77□□□□□ -0.53
CSNK2A1-202ENST00000349736 CABLES1Q8TDN4 633 aa11.77□□□□□ -0.53
CSNK2A1-202ENST00000349736 RIMS2Q9UQ26 1411 aa11.77□□□□□ -0.53
CSNK2A1-202ENST00000349736 POGZQ7Z3K3 1410 aa11.76□□□□□ -0.53
CSNK2A1-202ENST00000349736 YTHDC2Q9H6S0 1430 aaKnown RBP11.76□□□□□ -0.53
CSNK2A1-202ENST00000349736 C1orf141Q5JVX7 400 aa11.76□□□□□ -0.53
CSNK2A1-202ENST00000349736 CHMP4BQ9H444 224 aaKnown RBP11.76□□□□□ -0.53
CSNK2A1-202ENST00000349736 PPIP5K1Q6PFW1 1433 aa11.75□□□□□ -0.53
CSNK2A1-202ENST00000349736 MYL6BP14649 208 aa11.75□□□□□ -0.53
CSNK2A1-202ENST00000349736 DDX54Q8TDD1 881 aaKnown RBP11.75□□□□□ -0.53
CSNK2A1-202ENST00000349736 HDGFL1Q5TGJ6 251 aa11.75□□□□□ -0.53
CSNK2A1-202ENST00000349736 CHD1LQ86WJ1 897 aa11.75□□□□□ -0.53
CSNK2A1-202ENST00000349736 SYTL4Q96C24 671 aaPredicted RBP11.75□□□□□ -0.53
CSNK2A1-202ENST00000349736 TTC21BQ7Z4L5 1316 aa11.75□□□□□ -0.53
CSNK2A1-202ENST00000349736 METP08581 1390 aa11.75□□□□□ -0.53
CSNK2A1-202ENST00000349736 CHRNA2Q15822 529 aa11.75□□□□□ -0.53
CSNK2A1-202ENST00000349736 C9orf78Q9NZ63 289 aaPredicted RBP11.75□□□□□ -0.53
CSNK2A1-202ENST00000349736 POLR3AO14802 1390 aaPredicted RBP11.74□□□□□ -0.53
CSNK2A1-202ENST00000349736 ZNF530Q6P9A1 599 aaPredicted RBP11.74□□□□□ -0.53
CSNK2A1-202ENST00000349736 RBM42Q9BTD8 480 aaKnown RBP11.74□□□□□ -0.53
CSNK2A1-202ENST00000349736 ANO2Q9NQ90 1003 aa11.74□□□□□ -0.53
CSNK2A1-202ENST00000349736 STRN4Q9NRL3 753 aa11.74□□□□□ -0.53
CSNK2A1-202ENST00000349736 HSPA2P54652 639 aa11.74□□□□□ -0.53
CSNK2A1-202ENST00000349736 GSE1Q14687 1217 aa11.74□□□□□ -0.53
CSNK2A1-202ENST00000349736 LARP6Q9BRS8 491 aaKnown RBP11.74□□□□□ -0.53
CSNK2A1-202ENST00000349736 SURF6O75683 361 aaKnown RBP11.74□□□□□ -0.53
CSNK2A1-202ENST00000349736 MEIS3Q99687 375 aa11.74□□□□□ -0.53
CSNK2A1-202ENST00000349736 SIL1Q9H173 461 aa11.74□□□□□ -0.53
CSNK2A1-202ENST00000349736 ANKLE2Q86XL3 938 aa11.73□□□□□ -0.53
CSNK2A1-202ENST00000349736 RSPH6AQ9H0K4 717 aa11.73□□□□□ -0.53
CSNK2A1-202ENST00000349736 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.73□□□□□ -0.53
CSNK2A1-202ENST00000349736 HMMRO75330 724 aa11.73□□□□□ -0.53
CSNK2A1-202ENST00000349736 VAMP4O75379 141 aa11.73□□□□□ -0.53
CSNK2A1-202ENST00000349736 MTHFSDQ2M296 383 aaKnown RBP11.73□□□□□ -0.53
CSNK2A1-202ENST00000349736 G2E3Q7L622 706 aa11.73□□□□□ -0.53
CSNK2A1-202ENST00000349736 TNRQ92752 1358 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms