RNA–Protein interactions for RNA: ENST00000349505.4

HDAC10-202, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best) BASIC

Gene HDAC10, Length 1,950 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-202ENST00000349505 ITSN1Q15811 1721 aa23.55■■□□□ 1.36
HDAC10-202ENST00000349505 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.53■■□□□ 1.36
HDAC10-202ENST00000349505 WWC1Q8IX03 1113 aa23.53■■□□□ 1.36
HDAC10-202ENST00000349505 ZNF692Q9BU19 519 aaPredicted RBP23.53■■□□□ 1.36
HDAC10-202ENST00000349505 ERICH6Q7L0X2 663 aa23.52■■□□□ 1.36
HDAC10-202ENST00000349505 TCP11L2Q8N4U5 519 aa23.52■■□□□ 1.36
HDAC10-202ENST00000349505 PHF23Q9BUL5 403 aaPredicted RBP23.52■■□□□ 1.36
HDAC10-202ENST00000349505 AMOTL2Q9Y2J4 779 aa23.52■■□□□ 1.36
HDAC10-202ENST00000349505 ADAMTSL3P82987 1691 aa23.52■■□□□ 1.36
HDAC10-202ENST00000349505 TOPAZ1Q8N9V7 1692 aa23.52■■□□□ 1.36
HDAC10-202ENST00000349505 NKTRP30414 1462 aaKnown RBP23.52■■□□□ 1.36
HDAC10-202ENST00000349505 PRR36Q9H6K5 1346 aa23.52■■□□□ 1.36
HDAC10-202ENST00000349505 U2AF1L5P0DN76 240 aaPredicted RBP23.52■■□□□ 1.36
HDAC10-202ENST00000349505 U2AF1Q01081 240 aaKnown RBP eCLIP23.52■■□□□ 1.36
HDAC10-202ENST00000349505 CCDC27Q2M243 656 aa23.52■■□□□ 1.36
HDAC10-202ENST00000349505 ZNF142P52746 1687 aaPredicted RBP23.5■■□□□ 1.35
HDAC10-202ENST00000349505 CCDC136Q96JN2 1154 aa23.5■■□□□ 1.35
HDAC10-202ENST00000349505 SPINK5Q9NQ38 1064 aaPredicted RBP23.5■■□□□ 1.35
HDAC10-202ENST00000349505 PIK3R4Q99570 1358 aa23.5■■□□□ 1.35
HDAC10-202ENST00000349505 DNAJC5Q9H3Z4 198 aa23.49■■□□□ 1.35
HDAC10-202ENST00000349505 XRN1Q8IZH2 1706 aaKnown RBP23.49■■□□□ 1.35
HDAC10-202ENST00000349505 WDR63Q8IWG1 891 aa23.47■■□□□ 1.35
HDAC10-202ENST00000349505 AATKQ6ZMQ8 1374 aa23.47■■□□□ 1.35
HDAC10-202ENST00000349505 NCKAP5LQ9HCH0 1330 aa23.47■■□□□ 1.35
HDAC10-202ENST00000349505 PLEKHG3A1L390 1219 aa23.47■■□□□ 1.35
HDAC10-202ENST00000349505 DIAPH1O60610 1272 aaKnown RBP23.47■■□□□ 1.35
HDAC10-202ENST00000349505 EXOC6Q8TAG9 804 aa23.45■■□□□ 1.35
HDAC10-202ENST00000349505 POLKQ9UBT6 870 aa23.45■■□□□ 1.35
HDAC10-202ENST00000349505 MAP2P11137 1827 aaKnown RBP23.45■■□□□ 1.34
HDAC10-202ENST00000349505 DMRT2Q9Y5R5 561 aa23.45■■□□□ 1.34
HDAC10-202ENST00000349505 NRKQ7Z2Y5 1582 aa23.44■■□□□ 1.34
HDAC10-202ENST00000349505 U2SURPO15042 1029 aaKnown RBP23.44■■□□□ 1.34
HDAC10-202ENST00000349505 MSH5O43196 834 aa23.44■■□□□ 1.34
HDAC10-202ENST00000349505 NME9Q86XW9 330 aa23.44■■□□□ 1.34
HDAC10-202ENST00000349505 PLEKHF1Q96S99 279 aa23.44■■□□□ 1.34
HDAC10-202ENST00000349505 PNNQ9H307 717 aaKnown RBP23.44■■□□□ 1.34
HDAC10-202ENST00000349505 SETD1BQ9UPS6 1966 aaKnown RBP23.44■■□□□ 1.34
HDAC10-202ENST00000349505 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.43■■□□□ 1.34
HDAC10-202ENST00000349505 COG3Q96JB2 828 aa23.43■■□□□ 1.34
HDAC10-202ENST00000349505 RRP7AQ9Y3A4 280 aaKnown RBP23.43■■□□□ 1.34
HDAC10-202ENST00000349505 PLIN1O60240 522 aa23.42■■□□□ 1.34
HDAC10-202ENST00000349505 NEUROD2Q15784 382 aa23.42■■□□□ 1.34
HDAC10-202ENST00000349505 CDK12Q9NYV4 1490 aaPredicted RBP23.41■■□□□ 1.34
HDAC10-202ENST00000349505 ANKLE2Q86XL3 938 aa23.4■■□□□ 1.34
HDAC10-202ENST00000349505 ACEP12821 1306 aa23.4■■□□□ 1.34
HDAC10-202ENST00000349505 USP6P35125 1406 aa23.39■■□□□ 1.34
HDAC10-202ENST00000349505 MAPK8IP3Q9UPT6 1336 aa23.38■■□□□ 1.33
HDAC10-202ENST00000349505 FCHSD2O94868 740 aa23.38■■□□□ 1.33
HDAC10-202ENST00000349505 TTC21BQ7Z4L5 1316 aa23.38■■□□□ 1.33
HDAC10-202ENST00000349505 ZRANB1Q9UGI0 708 aa23.36■■□□□ 1.33
HDAC10-202ENST00000349505 TMPOP42166 694 aaKnown RBP23.36■■□□□ 1.33
HDAC10-202ENST00000349505 ANKARQ7Z5J8 1434 aa23.35■■□□□ 1.33
HDAC10-202ENST00000349505 KCNA6P17658 529 aa23.35■■□□□ 1.33
HDAC10-202ENST00000349505 CRBNQ96SW2 442 aa23.35■■□□□ 1.33
HDAC10-202ENST00000349505 OVOS2A0A0J9YW53 1432 aa23.35■■□□□ 1.33
HDAC10-202ENST00000349505 OVOS2Q6IE36 1432 aa23.35■■□□□ 1.33
HDAC10-202ENST00000349505 SSH2Q76I76 1423 aa23.35■■□□□ 1.33
HDAC10-202ENST00000349505 CHD2O14647 1828 aaKnown RBP23.34■■□□□ 1.33
HDAC10-202ENST00000349505 PPM1GO15355 546 aaPredicted RBP23.34■■□□□ 1.33
HDAC10-202ENST00000349505 FBLN1P23142 703 aa23.34■■□□□ 1.33
HDAC10-202ENST00000349505 MYH16Q9H6N6 1097 aa23.34■■□□□ 1.33
HDAC10-202ENST00000349505 EMILIN1Q9Y6C2 1016 aa23.34■■□□□ 1.33
HDAC10-202ENST00000349505 NUTM2FA1L443 756 aa23.34■■□□□ 1.33
HDAC10-202ENST00000349505 LRRC7Q96NW7 1537 aa23.33■■□□□ 1.33
HDAC10-202ENST00000349505 NALCNQ8IZF0 1738 aa23.32■■□□□ 1.32
HDAC10-202ENST00000349505 C20orf194Q5TEA3 1177 aa23.32■■□□□ 1.32
HDAC10-202ENST00000349505 TTC21AQ8NDW8 1320 aa23.31■■□□□ 1.32
HDAC10-202ENST00000349505 RSPH6AQ9H0K4 717 aa23.31■■□□□ 1.32
HDAC10-202ENST00000349505 IL13P35225 146 aa23.31■■□□□ 1.32
HDAC10-202ENST00000349505 IL16Q14005 1332 aa23.3■■□□□ 1.32
HDAC10-202ENST00000349505 FMN2Q9NZ56 1722 aa23.3■■□□□ 1.32
HDAC10-202ENST00000349505 TRIM35Q9UPQ4 493 aa23.3■■□□□ 1.32
HDAC10-202ENST00000349505 RGPD8O14715 1765 aaPredicted RBP23.3■■□□□ 1.32
HDAC10-202ENST00000349505 NEFMP07197 916 aa23.29■■□□□ 1.32
HDAC10-202ENST00000349505 USP31Q70CQ4 1352 aa23.29■■□□□ 1.32
HDAC10-202ENST00000349505 BCAR3O75815 825 aa23.29■■□□□ 1.32
HDAC10-202ENST00000349505 RRS1Q15050 365 aaKnown RBP23.27■■□□□ 1.32
HDAC10-202ENST00000349505 RIPK4P57078 832 aa23.27■■□□□ 1.32
HDAC10-202ENST00000349505 CT47B1P0C2W7 299 aaPredicted RBP23.26■■□□□ 1.31
HDAC10-202ENST00000349505 PRKAR2BP31323 418 aa23.26■■□□□ 1.31
HDAC10-202ENST00000349505 ANP32AP39687 249 aaKnown RBP23.26■■□□□ 1.31
HDAC10-202ENST00000349505 NGDNQ8NEJ9 315 aaKnown RBP23.25■■□□□ 1.31
HDAC10-202ENST00000349505 PMFBP1Q8TBY8 1022 aa23.25■■□□□ 1.31
HDAC10-202ENST00000349505 RARSP54136 660 aaKnown RBP23.25■■□□□ 1.31
HDAC10-202ENST00000349505 PDE3AQ14432 1141 aa23.24■■□□□ 1.31
HDAC10-202ENST00000349505 TCERG1O14776 1098 aaKnown RBP23.23■■□□□ 1.31
HDAC10-202ENST00000349505 NPHP4O75161 1426 aaPredicted RBP23.23■■□□□ 1.31
HDAC10-202ENST00000349505 NOP58Q9Y2X3 529 aaKnown RBP23.23■■□□□ 1.31
HDAC10-202ENST00000349505 HMOX1P09601 288 aa23.21■■□□□ 1.31
HDAC10-202ENST00000349505 NFE2L2Q16236 605 aa23.21■■□□□ 1.31
HDAC10-202ENST00000349505 MS4A1P11836 297 aa23.2■■□□□ 1.3
HDAC10-202ENST00000349505 PIK3C2AO00443 1686 aa23.18■■□□□ 1.3
HDAC10-202ENST00000349505 PHACTR3Q96KR7 559 aa23.18■■□□□ 1.3
HDAC10-202ENST00000349505 PEAK1Q9H792 1746 aa23.18■■□□□ 1.3
HDAC10-202ENST00000349505 USP54Q70EL1 1684 aa23.17■■□□□ 1.3
HDAC10-202ENST00000349505 ADGRL3Q9HAR2 1447 aa23.17■■□□□ 1.3
HDAC10-202ENST00000349505 CANXP27824 592 aaKnown RBP23.17■■□□□ 1.3
HDAC10-202ENST00000349505 IPO9Q96P70 1041 aaKnown RBP23.17■■□□□ 1.3
HDAC10-202ENST00000349505 CALD1Q05682 793 aaKnown RBP23.16■■□□□ 1.3
HDAC10-202ENST00000349505 EIF4A2Q14240 407 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms