RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 GAS2L2Q8NHY3 880 aa22.13■■□□□ 1.13
APP-202ENST00000348990 PTMSP20962 102 aa22.12■■□□□ 1.13
APP-202ENST00000348990 CCDC173Q0VFZ6 552 aa22.12■■□□□ 1.13
APP-202ENST00000348990 TBC1D9Q6ZT07 1266 aa22.12■■□□□ 1.13
APP-202ENST00000348990 FOXD4L5Q5VV16 416 aaPredicted RBP22.12■■□□□ 1.13
APP-202ENST00000348990 FOXD4L4Q8WXT5 416 aaPredicted RBP22.12■■□□□ 1.13
APP-202ENST00000348990 EVC2Q86UK5 1308 aa22.11■■□□□ 1.13
APP-202ENST00000348990 FAM13BQ9NYF5 915 aa22.1■■□□□ 1.13
APP-202ENST00000348990 TRIM35Q9UPQ4 493 aa22.1■■□□□ 1.13
APP-202ENST00000348990 RTEL1-TNFRSF6BF6WH68 1400 aa22.1■■□□□ 1.13
APP-202ENST00000348990 TPM2P07951 284 aa22.1■■□□□ 1.13
APP-202ENST00000348990 R3HCC1Q9Y3T6 440 aaKnown RBP22.1■■□□□ 1.13
APP-202ENST00000348990 UGGT1Q9NYU2 1555 aa22.1■■□□□ 1.13
APP-202ENST00000348990 NOS1P29475 1434 aa22.09■■□□□ 1.13
APP-202ENST00000348990 PLCH2O75038 1416 aa22.09■■□□□ 1.13
APP-202ENST00000348990 ZSCAN30Q86W11 494 aa22.09■■□□□ 1.13
APP-202ENST00000348990 PLXNC1O60486 1568 aa22.09■■□□□ 1.13
APP-202ENST00000348990 BMP2KLQ5H9B9 411 aa22.08■■□□□ 1.13
APP-202ENST00000348990 THUMPD2Q9BTF0 503 aaKnown RBP22.08■■□□□ 1.13
APP-202ENST00000348990 MYOM1P52179 1685 aa22.08■■□□□ 1.13
APP-202ENST00000348990 BAG4O95429 457 aaKnown RBP22.07■■□□□ 1.12
APP-202ENST00000348990 CLTCL1P53675 1640 aa22.07■■□□□ 1.12
APP-202ENST00000348990 TRPM2O94759 1503 aa22.06■■□□□ 1.12
APP-202ENST00000348990 DIAPH1O60610 1272 aaKnown RBP22.06■■□□□ 1.12
APP-202ENST00000348990 TPRNQ4KMQ1 711 aa22.04■■□□□ 1.12
APP-202ENST00000348990 DDIT3P35638 169 aa22.04■■□□□ 1.12
APP-202ENST00000348990 ZNF518AQ6AHZ1 1483 aa22.04■■□□□ 1.12
APP-202ENST00000348990 HMOX1P09601 288 aa22.04■■□□□ 1.12
APP-202ENST00000348990 PRPF40AO75400 957 aaKnown RBP22.03■■□□□ 1.12
APP-202ENST00000348990 CDC45O75419 566 aa22.03■■□□□ 1.12
APP-202ENST00000348990 FBLN1P23142 703 aa22.03■■□□□ 1.12
APP-202ENST00000348990 KIF2CQ99661 725 aa22.03■■□□□ 1.12
APP-202ENST00000348990 GCC1Q96CN9 775 aa22.02■■□□□ 1.12
APP-202ENST00000348990 KLHL40Q2TBA0 621 aa22.02■■□□□ 1.12
APP-202ENST00000348990 MINK1Q8N4C8 1332 aaPredicted RBP22.01■■□□□ 1.11
APP-202ENST00000348990 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.01■■□□□ 1.11
APP-202ENST00000348990 C14orf93Q9H972 538 aaKnown RBP22.01■■□□□ 1.11
APP-202ENST00000348990 PRKAR2BP31323 418 aa22.01■■□□□ 1.11
APP-202ENST00000348990 XPCQ01831 940 aaPredicted RBP22.01■■□□□ 1.11
APP-202ENST00000348990 CEP152O94986 1710 aa22.01■■□□□ 1.11
APP-202ENST00000348990 IQSEC2Q5JU85 1478 aa22.01■■□□□ 1.11
APP-202ENST00000348990 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.01■■□□□ 1.11
APP-202ENST00000348990 PDCL3Q9H2J4 239 aa22■■□□□ 1.11
APP-202ENST00000348990 CHMP4BQ9H444 224 aaKnown RBP22■■□□□ 1.11
APP-202ENST00000348990 SPHKAPQ2M3C7 1700 aa21.99■■□□□ 1.11
APP-202ENST00000348990 RBM27Q9P2N5 1060 aaKnown RBP21.99■■□□□ 1.11
APP-202ENST00000348990 PTMAP06454 111 aaKnown RBP21.99■■□□□ 1.11
APP-202ENST00000348990 RNF214Q8ND24 703 aa21.99■■□□□ 1.11
APP-202ENST00000348990 PLEKHF1Q96S99 279 aa21.99■■□□□ 1.11
APP-202ENST00000348990 NUCB2P80303 420 aa21.98■■□□□ 1.11
APP-202ENST00000348990 PKP1Q13835 747 aa21.98■■□□□ 1.11
APP-202ENST00000348990 FOXD4L6Q3SYB3 417 aaPredicted RBP21.98■■□□□ 1.11
APP-202ENST00000348990 FOXD4L3Q6VB84 417 aaPredicted RBP21.98■■□□□ 1.11
APP-202ENST00000348990 ZBTB7BO15156 539 aaPredicted RBP21.97■■□□□ 1.11
APP-202ENST00000348990 ZSCAN23Q3MJ62 389 aa21.97■■□□□ 1.11
APP-202ENST00000348990 TSPYL6Q8N831 410 aa21.97■■□□□ 1.11
APP-202ENST00000348990 ABCC11Q96J66 1382 aa21.97■■□□□ 1.11
APP-202ENST00000348990 NOL8Q76FK4 1167 aaKnown RBP21.96■■□□□ 1.11
APP-202ENST00000348990 OFD1O75665 1012 aa21.96■■□□□ 1.11
APP-202ENST00000348990 CHAMP1Q96JM3 812 aa21.96■■□□□ 1.11
APP-202ENST00000348990 TERF2IPQ9NYB0 399 aa21.96■■□□□ 1.11
APP-202ENST00000348990 NCOA3Q9Y6Q9 1424 aa21.95■■□□□ 1.11
APP-202ENST00000348990 RABEP1Q15276 862 aa21.95■■□□□ 1.1
APP-202ENST00000348990 ALDH1L2Q3SY69 923 aa21.95■■□□□ 1.1
APP-202ENST00000348990 C16orf71Q8IYS4 520 aaPredicted RBP21.95■■□□□ 1.1
APP-202ENST00000348990 CD109Q6YHK3 1445 aa21.95■■□□□ 1.1
APP-202ENST00000348990 PPP1R9BQ96SB3 815 aa21.95■■□□□ 1.1
APP-202ENST00000348990 SBNO2Q9Y2G9 1366 aa21.95■■□□□ 1.1
APP-202ENST00000348990 PRIM1P49642 420 aaKnown RBP21.95■■□□□ 1.1
APP-202ENST00000348990 DNTTIP2Q5QJE6 756 aaKnown RBP21.95■■□□□ 1.1
APP-202ENST00000348990 RBSNQ9H1K0 784 aa21.95■■□□□ 1.1
APP-202ENST00000348990 MPNDQ8N594 471 aa21.94■■□□□ 1.1
APP-202ENST00000348990 ANKRD36BQ8N2N9 1353 aa21.94■■□□□ 1.1
APP-202ENST00000348990 CASC1Q6TDU7 716 aa21.93■■□□□ 1.1
APP-202ENST00000348990 FYB1O15117 783 aa21.93■■□□□ 1.1
APP-202ENST00000348990 ST18O60284 1047 aa21.93■■□□□ 1.1
APP-202ENST00000348990 ZGPATQ8N5A5 531 aaKnown RBP21.93■■□□□ 1.1
APP-202ENST00000348990 IL16Q14005 1332 aa21.92■■□□□ 1.1
APP-202ENST00000348990 ABCA6Q8N139 1617 aa21.92■■□□□ 1.1
APP-202ENST00000348990 ATAD2Q6PL18 1390 aa21.92■■□□□ 1.1
APP-202ENST00000348990 CFAP65Q6ZU64 1925 aaKnown RBP21.92■■□□□ 1.1
APP-202ENST00000348990 SYCE3A1L190 88 aa21.91■■□□□ 1.1
APP-202ENST00000348990 HDGFL2Q7Z4V5 671 aaPredicted RBP21.91■■□□□ 1.1
APP-202ENST00000348990 PPIP5K1Q6PFW1 1433 aa21.91■■□□□ 1.1
APP-202ENST00000348990 UQCRHLA0A096LP55 91 aa21.91■■□□□ 1.1
APP-202ENST00000348990 UQCRHP07919 91 aa21.91■■□□□ 1.1
APP-202ENST00000348990 MAP3K4Q9Y6R4 1608 aa21.9■■□□□ 1.1
APP-202ENST00000348990 SIRT2Q8IXJ6 389 aa21.9■■□□□ 1.1
APP-202ENST00000348990 VGFO15240 615 aaPredicted RBP21.9■■□□□ 1.1
APP-202ENST00000348990 TWISTNBQ3B726 338 aaPredicted RBP21.9■■□□□ 1.1
APP-202ENST00000348990 SMARCA5O60264 1052 aaPredicted RBP21.9■■□□□ 1.1
APP-202ENST00000348990 SHPRHQ149N8 1683 aa21.9■■□□□ 1.1
APP-202ENST00000348990 VAMP4O75379 141 aa21.89■■□□□ 1.1
APP-202ENST00000348990 GSPT1P15170 499 aaKnown RBP21.89■■□□□ 1.1
APP-202ENST00000348990 INTS3Q68E01 1043 aaKnown RBP21.89■■□□□ 1.09
APP-202ENST00000348990 MRPL50Q8N5N7 158 aaKnown RBP21.89■■□□□ 1.09
APP-202ENST00000348990 PHACTR3Q96KR7 559 aa21.88■■□□□ 1.09
APP-202ENST00000348990 LMBRD1Q9NUN5 540 aa21.88■■□□□ 1.09
APP-202ENST00000348990 A0A1W2PP64 1363 aa21.88■■□□□ 1.09
APP-202ENST00000348990 OTUD7AQ8TE49 926 aaPredicted RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms