RNA–Protein interactions for RNA: ENST00000346691.9

ATRIP-202, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-202ENST00000346691 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.35■■□□□ 1.49
ATRIP-202ENST00000346691 NKTRP30414 1462 aaKnown RBP24.35■■□□□ 1.49
ATRIP-202ENST00000346691 CPSF1Q10570 1443 aaKnown RBP24.34■■□□□ 1.49
ATRIP-202ENST00000346691 NUTM2FA1L443 756 aa24.34■■□□□ 1.49
ATRIP-202ENST00000346691 NME9Q86XW9 330 aa24.33■■□□□ 1.49
ATRIP-202ENST00000346691 SIRT1Q96EB6 747 aa24.33■■□□□ 1.49
ATRIP-202ENST00000346691 EID1Q9Y6B2 187 aa24.31■■□□□ 1.48
ATRIP-202ENST00000346691 BCAR3O75815 825 aa24.31■■□□□ 1.48
ATRIP-202ENST00000346691 SLIT1O75093 1534 aa24.3■■□□□ 1.48
ATRIP-202ENST00000346691 ARHGAP23Q9P227 1491 aa24.3■■□□□ 1.48
ATRIP-202ENST00000346691 PPM1GO15355 546 aaPredicted RBP24.3■■□□□ 1.48
ATRIP-202ENST00000346691 NGEFQ8N5V2 710 aa24.3■■□□□ 1.48
ATRIP-202ENST00000346691 CDC42BPGQ6DT37 1551 aa24.3■■□□□ 1.48
ATRIP-202ENST00000346691 PHF23Q9BUL5 403 aaPredicted RBP24.3■■□□□ 1.48
ATRIP-202ENST00000346691 CCDC61Q9Y6R9 512 aa24.29■■□□□ 1.48
ATRIP-202ENST00000346691 EDC4Q6P2E9 1401 aaKnown RBP24.28■■□□□ 1.48
ATRIP-202ENST00000346691 PLEKHF1Q96S99 279 aa24.28■■□□□ 1.48
ATRIP-202ENST00000346691 POLKQ9UBT6 870 aa24.28■■□□□ 1.48
ATRIP-202ENST00000346691 ADGRB2O60241 1585 aa24.28■■□□□ 1.48
ATRIP-202ENST00000346691 MAP2P11137 1827 aaKnown RBP24.27■■□□□ 1.48
ATRIP-202ENST00000346691 MON2Q7Z3U7 1717 aa24.27■■□□□ 1.48
ATRIP-202ENST00000346691 AKAP12Q02952 1782 aa24.26■■□□□ 1.47
ATRIP-202ENST00000346691 PNPLA6Q8IY17 1366 aa24.25■■□□□ 1.47
ATRIP-202ENST00000346691 DIAPH1O60610 1272 aaKnown RBP24.25■■□□□ 1.47
ATRIP-202ENST00000346691 AMOTL2Q9Y2J4 779 aa24.25■■□□□ 1.47
ATRIP-202ENST00000346691 EMILIN1Q9Y6C2 1016 aa24.25■■□□□ 1.47
ATRIP-202ENST00000346691 ITSN1Q15811 1721 aa24.25■■□□□ 1.47
ATRIP-202ENST00000346691 RIMS1Q86UR5 1692 aaKnown RBP24.24■■□□□ 1.47
ATRIP-202ENST00000346691 ERICH6Q7L0X2 663 aa24.23■■□□□ 1.47
ATRIP-202ENST00000346691 THEMISQ8N1K5 641 aaPredicted RBP24.23■■□□□ 1.47
ATRIP-202ENST00000346691 CCDC27Q2M243 656 aa24.21■■□□□ 1.47
ATRIP-202ENST00000346691 WDR63Q8IWG1 891 aa24.21■■□□□ 1.47
ATRIP-202ENST00000346691 TMPOP42166 694 aaKnown RBP24.2■■□□□ 1.46
ATRIP-202ENST00000346691 SKAP1Q86WV1 359 aa24.2■■□□□ 1.46
ATRIP-202ENST00000346691 TBX22Q9Y458 520 aa24.2■■□□□ 1.46
ATRIP-202ENST00000346691 TOPAZ1Q8N9V7 1692 aa24.2■■□□□ 1.46
ATRIP-202ENST00000346691 RRS1Q15050 365 aaKnown RBP24.19■■□□□ 1.46
ATRIP-202ENST00000346691 TRIM35Q9UPQ4 493 aa24.18■■□□□ 1.46
ATRIP-202ENST00000346691 ACEP12821 1306 aa24.18■■□□□ 1.46
ATRIP-202ENST00000346691 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.18■■□□□ 1.46
ATRIP-202ENST00000346691 CEP170BQ9Y4F5 1589 aaPredicted RBP24.17■■□□□ 1.46
ATRIP-202ENST00000346691 LRRC7Q96NW7 1537 aa24.17■■□□□ 1.46
ATRIP-202ENST00000346691 MAPK8IP3Q9UPT6 1336 aa24.17■■□□□ 1.46
ATRIP-202ENST00000346691 COG3Q96JB2 828 aa24.16■■□□□ 1.46
ATRIP-202ENST00000346691 TSR2Q969E8 191 aaKnown RBP24.16■■□□□ 1.46
ATRIP-202ENST00000346691 HMOX1P09601 288 aa24.15■■□□□ 1.46
ATRIP-202ENST00000346691 NRKQ7Z2Y5 1582 aa24.15■■□□□ 1.46
ATRIP-202ENST00000346691 BCL2L13Q9BXK5 485 aa24.15■■□□□ 1.46
ATRIP-202ENST00000346691 RGPD8O14715 1765 aaPredicted RBP24.14■■□□□ 1.45
ATRIP-202ENST00000346691 ZNF692Q9BU19 519 aaPredicted RBP24.14■■□□□ 1.45
ATRIP-202ENST00000346691 PMFBP1Q8TBY8 1022 aa24.13■■□□□ 1.45
ATRIP-202ENST00000346691 PRKAR2BP31323 418 aa24.13■■□□□ 1.45
ATRIP-202ENST00000346691 RSPH6AQ9H0K4 717 aa24.13■■□□□ 1.45
ATRIP-202ENST00000346691 TTC21BQ7Z4L5 1316 aa24.12■■□□□ 1.45
ATRIP-202ENST00000346691 RARSP54136 660 aaKnown RBP24.12■■□□□ 1.45
ATRIP-202ENST00000346691 RIPK4P57078 832 aa24.12■■□□□ 1.45
ATRIP-202ENST00000346691 PTCH1Q13635 1447 aa24.12■■□□□ 1.45
ATRIP-202ENST00000346691 KCNA6P17658 529 aa24.12■■□□□ 1.45
ATRIP-202ENST00000346691 PLEKHG3A1L390 1219 aa24.11■■□□□ 1.45
ATRIP-202ENST00000346691 TNNQ9UQP3 1299 aa24.11■■□□□ 1.45
ATRIP-202ENST00000346691 XRN1Q8IZH2 1706 aaKnown RBP24.11■■□□□ 1.45
ATRIP-202ENST00000346691 IL13P35225 146 aa24.11■■□□□ 1.45
ATRIP-202ENST00000346691 FRAT1Q92837 279 aaPredicted RBP24.11■■□□□ 1.45
ATRIP-202ENST00000346691 DIP2AQ14689 1571 aa24.11■■□□□ 1.45
ATRIP-202ENST00000346691 PANK1Q8TE04 598 aa24.1■■□□□ 1.45
ATRIP-202ENST00000346691 PHACTR3Q96KR7 559 aa24.1■■□□□ 1.45
ATRIP-202ENST00000346691 AATKQ6ZMQ8 1374 aa24.1■■□□□ 1.45
ATRIP-202ENST00000346691 CDK12Q9NYV4 1490 aaPredicted RBP24.1■■□□□ 1.45
ATRIP-202ENST00000346691 USP6P35125 1406 aa24.09■■□□□ 1.45
ATRIP-202ENST00000346691 NCBP3Q53F19 620 aaKnown RBP24.09■■□□□ 1.45
ATRIP-202ENST00000346691 MYH16Q9H6N6 1097 aa24.09■■□□□ 1.45
ATRIP-202ENST00000346691 FCHSD2O94868 740 aa24.09■■□□□ 1.45
ATRIP-202ENST00000346691 CANXP27824 592 aaKnown RBP24.08■■□□□ 1.44
ATRIP-202ENST00000346691 KDM2BQ8NHM5 1336 aa24.07■■□□□ 1.44
ATRIP-202ENST00000346691 SOX12O15370 315 aa24.07■■□□□ 1.44
ATRIP-202ENST00000346691 RBM33Q96EV2 1170 aaKnown RBP24.06■■□□□ 1.44
ATRIP-202ENST00000346691 COG6Q9Y2V7 657 aa24.06■■□□□ 1.44
ATRIP-202ENST00000346691 EXOSC9Q06265 439 aaKnown RBP24.05■■□□□ 1.44
ATRIP-202ENST00000346691 ADAMTSL3P82987 1691 aa24.05■■□□□ 1.44
ATRIP-202ENST00000346691 OVOS2A0A0J9YW53 1432 aa24.04■■□□□ 1.44
ATRIP-202ENST00000346691 OVOS2Q6IE36 1432 aa24.04■■□□□ 1.44
ATRIP-202ENST00000346691 THUMPD2Q9BTF0 503 aaKnown RBP24.03■■□□□ 1.44
ATRIP-202ENST00000346691 RLBP1P12271 317 aa24.03■■□□□ 1.44
ATRIP-202ENST00000346691 SSH2Q76I76 1423 aa24.02■■□□□ 1.44
ATRIP-202ENST00000346691 PNNQ9H307 717 aaKnown RBP24.02■■□□□ 1.44
ATRIP-202ENST00000346691 PDE3AQ14432 1141 aa24.01■■□□□ 1.43
ATRIP-202ENST00000346691 PEAK1Q9H792 1746 aa24.01■■□□□ 1.43
ATRIP-202ENST00000346691 NGDNQ8NEJ9 315 aaKnown RBP24■■□□□ 1.43
ATRIP-202ENST00000346691 CLUAP1Q96AJ1 413 aa24■■□□□ 1.43
ATRIP-202ENST00000346691 NALCNQ8IZF0 1738 aa23.99■■□□□ 1.43
ATRIP-202ENST00000346691 ZNF142P52746 1687 aaPredicted RBP23.99■■□□□ 1.43
ATRIP-202ENST00000346691 ANKLE2Q86XL3 938 aa23.99■■□□□ 1.43
ATRIP-202ENST00000346691 NFE2L2Q16236 605 aa23.99■■□□□ 1.43
ATRIP-202ENST00000346691 TCERG1O14776 1098 aaKnown RBP23.98■■□□□ 1.43
ATRIP-202ENST00000346691 EIF4A2Q14240 407 aaKnown RBP23.98■■□□□ 1.43
ATRIP-202ENST00000346691 AEBP1Q8IUX7 1158 aa23.98■■□□□ 1.43
ATRIP-202ENST00000346691 LAS1LQ9Y4W2 734 aaKnown RBP23.98■■□□□ 1.43
ATRIP-202ENST00000346691 CENPQQ7L2Z9 268 aaPredicted RBP23.97■■□□□ 1.43
ATRIP-202ENST00000346691 IL16Q14005 1332 aa23.97■■□□□ 1.43
ATRIP-202ENST00000346691 HSP90AB2PQ58FF8 381 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms