RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 AMOTL2Q9Y2J4 779 aa18.52■□□□□ 0.55
CDK5RAP1-202ENST00000346416 RRP7AQ9Y3A4 280 aaKnown RBP18.52■□□□□ 0.55
CDK5RAP1-202ENST00000346416 ADGRB2O60241 1585 aa18.52■□□□□ 0.55
CDK5RAP1-202ENST00000346416 RIMS1Q86UR5 1692 aaKnown RBP18.51■□□□□ 0.55
CDK5RAP1-202ENST00000346416 NKTRP30414 1462 aaKnown RBP18.5■□□□□ 0.55
CDK5RAP1-202ENST00000346416 PNPLA6Q8IY17 1366 aa18.49■□□□□ 0.55
CDK5RAP1-202ENST00000346416 U2SURPO15042 1029 aaKnown RBP18.49■□□□□ 0.55
CDK5RAP1-202ENST00000346416 CEP170BQ9Y4F5 1589 aaPredicted RBP18.49■□□□□ 0.55
CDK5RAP1-202ENST00000346416 NME9Q86XW9 330 aa18.49■□□□□ 0.55
CDK5RAP1-202ENST00000346416 PHF23Q9BUL5 403 aaPredicted RBP18.49■□□□□ 0.55
CDK5RAP1-202ENST00000346416 MON2Q7Z3U7 1717 aa18.48■□□□□ 0.55
CDK5RAP1-202ENST00000346416 ZNF692Q9BU19 519 aaPredicted RBP18.48■□□□□ 0.55
CDK5RAP1-202ENST00000346416 DIP2AQ14689 1571 aa18.48■□□□□ 0.55
CDK5RAP1-202ENST00000346416 FBLN1P23142 703 aa18.47■□□□□ 0.55
CDK5RAP1-202ENST00000346416 AKAP12Q02952 1782 aa18.47■□□□□ 0.55
CDK5RAP1-202ENST00000346416 ITSN1Q15811 1721 aa18.47■□□□□ 0.55
CDK5RAP1-202ENST00000346416 DIAPH1O60610 1272 aaKnown RBP18.47■□□□□ 0.55
CDK5RAP1-202ENST00000346416 POLKQ9UBT6 870 aa18.47■□□□□ 0.55
CDK5RAP1-202ENST00000346416 PTCH1Q13635 1447 aa18.46■□□□□ 0.55
CDK5RAP1-202ENST00000346416 CCDC27Q2M243 656 aa18.46■□□□□ 0.55
CDK5RAP1-202ENST00000346416 NUTM2FA1L443 756 aa18.46■□□□□ 0.55
CDK5RAP1-202ENST00000346416 ZRANB1Q9UGI0 708 aa18.46■□□□□ 0.55
CDK5RAP1-202ENST00000346416 PPM1GO15355 546 aaPredicted RBP18.45■□□□□ 0.54
CDK5RAP1-202ENST00000346416 NCBP3Q53F19 620 aaKnown RBP18.45■□□□□ 0.54
CDK5RAP1-202ENST00000346416 PLEKHF1Q96S99 279 aa18.45■□□□□ 0.54
CDK5RAP1-202ENST00000346416 MAP2P11137 1827 aaKnown RBP18.45■□□□□ 0.54
CDK5RAP1-202ENST00000346416 WDR63Q8IWG1 891 aa18.44■□□□□ 0.54
CDK5RAP1-202ENST00000346416 DNAJC5Q9H3Z4 198 aa18.44■□□□□ 0.54
CDK5RAP1-202ENST00000346416 TOPAZ1Q8N9V7 1692 aa18.44■□□□□ 0.54
CDK5RAP1-202ENST00000346416 PLEKHG3A1L390 1219 aa18.43■□□□□ 0.54
CDK5RAP1-202ENST00000346416 C20orf194Q5TEA3 1177 aa18.43■□□□□ 0.54
CDK5RAP1-202ENST00000346416 COG3Q96JB2 828 aa18.43■□□□□ 0.54
CDK5RAP1-202ENST00000346416 CRBNQ96SW2 442 aa18.43■□□□□ 0.54
CDK5RAP1-202ENST00000346416 ADAMTSL3P82987 1691 aa18.42■□□□□ 0.54
CDK5RAP1-202ENST00000346416 ACEP12821 1306 aa18.42■□□□□ 0.54
CDK5RAP1-202ENST00000346416 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.42■□□□□ 0.54
CDK5RAP1-202ENST00000346416 EMILIN1Q9Y6C2 1016 aa18.41■□□□□ 0.54
CDK5RAP1-202ENST00000346416 XRN1Q8IZH2 1706 aaKnown RBP18.41■□□□□ 0.54
CDK5RAP1-202ENST00000346416 AATKQ6ZMQ8 1374 aa18.41■□□□□ 0.54
CDK5RAP1-202ENST00000346416 RBM19Q9Y4C8 960 aaKnown RBP18.41■□□□□ 0.54
CDK5RAP1-202ENST00000346416 MAPK8IP3Q9UPT6 1336 aa18.41■□□□□ 0.54
CDK5RAP1-202ENST00000346416 KCNA6P17658 529 aa18.4■□□□□ 0.54
CDK5RAP1-202ENST00000346416 TMPOP42166 694 aaKnown RBP18.4■□□□□ 0.54
CDK5RAP1-202ENST00000346416 BCAR3O75815 825 aa18.39■□□□□ 0.53
CDK5RAP1-202ENST00000346416 ANKLE2Q86XL3 938 aa18.39■□□□□ 0.53
CDK5RAP1-202ENST00000346416 PNNQ9H307 717 aaKnown RBP18.39■□□□□ 0.53
CDK5RAP1-202ENST00000346416 TTC21BQ7Z4L5 1316 aa18.39■□□□□ 0.53
CDK5RAP1-202ENST00000346416 PIK3R4Q99570 1358 aa18.39■□□□□ 0.53
CDK5RAP1-202ENST00000346416 NRKQ7Z2Y5 1582 aa18.38■□□□□ 0.53
CDK5RAP1-202ENST00000346416 ZNF142P52746 1687 aaPredicted RBP18.38■□□□□ 0.53
CDK5RAP1-202ENST00000346416 SETD1BQ9UPS6 1966 aaKnown RBP18.38■□□□□ 0.53
CDK5RAP1-202ENST00000346416 FCHSD2O94868 740 aa18.38■□□□□ 0.53
CDK5RAP1-202ENST00000346416 USP6P35125 1406 aa18.38■□□□□ 0.53
CDK5RAP1-202ENST00000346416 CDK12Q9NYV4 1490 aaPredicted RBP18.37■□□□□ 0.53
CDK5RAP1-202ENST00000346416 RRS1Q15050 365 aaKnown RBP18.37■□□□□ 0.53
CDK5RAP1-202ENST00000346416 MYH16Q9H6N6 1097 aa18.35■□□□□ 0.53
CDK5RAP1-202ENST00000346416 TRIM35Q9UPQ4 493 aa18.35■□□□□ 0.53
CDK5RAP1-202ENST00000346416 LRRC7Q96NW7 1537 aa18.35■□□□□ 0.53
CDK5RAP1-202ENST00000346416 IL13P35225 146 aa18.35■□□□□ 0.53
CDK5RAP1-202ENST00000346416 PMFBP1Q8TBY8 1022 aa18.35■□□□□ 0.53
CDK5RAP1-202ENST00000346416 RSPH6AQ9H0K4 717 aa18.35■□□□□ 0.53
CDK5RAP1-202ENST00000346416 RGPD8O14715 1765 aaPredicted RBP18.34■□□□□ 0.53
CDK5RAP1-202ENST00000346416 PRKAR2BP31323 418 aa18.34■□□□□ 0.53
CDK5RAP1-202ENST00000346416 RIPK4P57078 832 aa18.34■□□□□ 0.53
CDK5RAP1-202ENST00000346416 OVOS2A0A0J9YW53 1432 aa18.33■□□□□ 0.52
CDK5RAP1-202ENST00000346416 OVOS2Q6IE36 1432 aa18.33■□□□□ 0.52
CDK5RAP1-202ENST00000346416 SSH2Q76I76 1423 aa18.33■□□□□ 0.52
CDK5RAP1-202ENST00000346416 HMOX1P09601 288 aa18.32■□□□□ 0.52
CDK5RAP1-202ENST00000346416 NGDNQ8NEJ9 315 aaKnown RBP18.32■□□□□ 0.52
CDK5RAP1-202ENST00000346416 NEFMP07197 916 aa18.31■□□□□ 0.52
CDK5RAP1-202ENST00000346416 RARSP54136 660 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP1-202ENST00000346416 CHD2O14647 1828 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP1-202ENST00000346416 TTC21AQ8NDW8 1320 aa18.3■□□□□ 0.52
CDK5RAP1-202ENST00000346416 ANKARQ7Z5J8 1434 aa18.3■□□□□ 0.52
CDK5RAP1-202ENST00000346416 FANCIQ9NVI1 1328 aa18.29■□□□□ 0.52
CDK5RAP1-202ENST00000346416 TSR2Q969E8 191 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP1-202ENST00000346416 PHACTR3Q96KR7 559 aa18.29■□□□□ 0.52
CDK5RAP1-202ENST00000346416 IL16Q14005 1332 aa18.28■□□□□ 0.52
CDK5RAP1-202ENST00000346416 NALCNQ8IZF0 1738 aa18.28■□□□□ 0.52
CDK5RAP1-202ENST00000346416 USP31Q70CQ4 1352 aa18.28■□□□□ 0.52
CDK5RAP1-202ENST00000346416 CANXP27824 592 aaKnown RBP18.28■□□□□ 0.52
CDK5RAP1-202ENST00000346416 PDE3AQ14432 1141 aa18.28■□□□□ 0.52
CDK5RAP1-202ENST00000346416 FMN2Q9NZ56 1722 aa18.27■□□□□ 0.52
CDK5RAP1-202ENST00000346416 NFE2L2Q16236 605 aa18.26■□□□□ 0.51
CDK5RAP1-202ENST00000346416 FRAT1Q92837 279 aaPredicted RBP18.26■□□□□ 0.51
CDK5RAP1-202ENST00000346416 CT47B1P0C2W7 299 aaPredicted RBP18.25■□□□□ 0.51
CDK5RAP1-202ENST00000346416 MYT1Q01538 1121 aa18.25■□□□□ 0.51
CDK5RAP1-202ENST00000346416 BCL2L13Q9BXK5 485 aa18.25■□□□□ 0.51
CDK5RAP1-202ENST00000346416 NPHP4O75161 1426 aaPredicted RBP18.24■□□□□ 0.51
CDK5RAP1-202ENST00000346416 SOX12O15370 315 aa18.24■□□□□ 0.51
CDK5RAP1-202ENST00000346416 EXOSC9Q06265 439 aaKnown RBP18.24■□□□□ 0.51
CDK5RAP1-202ENST00000346416 EIF4A2Q14240 407 aaKnown RBP18.24■□□□□ 0.51
CDK5RAP1-202ENST00000346416 RBM33Q96EV2 1170 aaKnown RBP18.24■□□□□ 0.51
CDK5RAP1-202ENST00000346416 PANK1Q8TE04 598 aa18.23■□□□□ 0.51
CDK5RAP1-202ENST00000346416 PEAK1Q9H792 1746 aa18.22■□□□□ 0.51
CDK5RAP1-202ENST00000346416 HSP90AB2PQ58FF8 381 aa18.22■□□□□ 0.51
CDK5RAP1-202ENST00000346416 KDM2BQ8NHM5 1336 aa18.22■□□□□ 0.51
CDK5RAP1-202ENST00000346416 PIK3C2AO00443 1686 aa18.21■□□□□ 0.51
CDK5RAP1-202ENST00000346416 MAP3K19Q56UN5 1328 aa18.2■□□□□ 0.5
CDK5RAP1-202ENST00000346416 COG6Q9Y2V7 657 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms