RNA–Protein interactions for RNA: ENST00000344135.5

TRIO-201, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-201ENST00000344135 PTCH1Q13635 1447 aa11.35□□□□□ -0.59
TRIO-201ENST00000344135 NGDNQ8NEJ9 315 aaKnown RBP11.35□□□□□ -0.59
TRIO-201ENST00000344135 POLKQ9UBT6 870 aa11.35□□□□□ -0.59
TRIO-201ENST00000344135 NEFLP07196 543 aa11.34□□□□□ -0.59
TRIO-201ENST00000344135 USP32Q8NFA0 1604 aa11.34□□□□□ -0.59
TRIO-201ENST00000344135 XRN1Q8IZH2 1706 aaKnown RBP11.33□□□□□ -0.6
TRIO-201ENST00000344135 NSD2O96028 1365 aa11.33□□□□□ -0.6
TRIO-201ENST00000344135 XPCQ01831 940 aaPredicted RBP11.33□□□□□ -0.6
TRIO-201ENST00000344135 DIP2AQ14689 1571 aa11.33□□□□□ -0.6
TRIO-201ENST00000344135 EDC4Q6P2E9 1401 aaKnown RBP11.33□□□□□ -0.6
TRIO-201ENST00000344135 TTC21BQ7Z4L5 1316 aa11.33□□□□□ -0.6
TRIO-201ENST00000344135 AEBP2Q6ZN18 517 aaPredicted RBP11.32□□□□□ -0.6
TRIO-201ENST00000344135 SMG6Q86US8 1419 aaKnown RBP11.32□□□□□ -0.6
TRIO-201ENST00000344135 CDC42BPGQ6DT37 1551 aa11.32□□□□□ -0.6
TRIO-201ENST00000344135 SHPRHQ149N8 1683 aa11.32□□□□□ -0.6
TRIO-201ENST00000344135 PLEKHG3A1L390 1219 aa11.32□□□□□ -0.6
TRIO-201ENST00000344135 COG3Q96JB2 828 aa11.32□□□□□ -0.6
TRIO-201ENST00000344135 CFAP53Q96M91 514 aa11.32□□□□□ -0.6
TRIO-201ENST00000344135 PAK3O75914 559 aaPredicted RBP11.31□□□□□ -0.6
TRIO-201ENST00000344135 ORAI2Q96SN7 254 aa11.31□□□□□ -0.6
TRIO-201ENST00000344135 CHD2O14647 1828 aaKnown RBP11.31□□□□□ -0.6
TRIO-201ENST00000344135 TCP11L2Q8N4U5 519 aa11.31□□□□□ -0.6
TRIO-201ENST00000344135 HMOX1P09601 288 aa11.3□□□□□ -0.6
TRIO-201ENST00000344135 ADGRB2O60241 1585 aa11.3□□□□□ -0.6
TRIO-201ENST00000344135 ESCO1Q5FWF5 840 aa11.3□□□□□ -0.6
TRIO-201ENST00000344135 PROSER2Q86WR7 435 aaPredicted RBP11.3□□□□□ -0.6
TRIO-201ENST00000344135 ZNF692Q9BU19 519 aaPredicted RBP11.3□□□□□ -0.6
TRIO-201ENST00000344135 USP6P35125 1406 aa11.3□□□□□ -0.6
TRIO-201ENST00000344135 MAP2P11137 1827 aaKnown RBP11.29□□□□□ -0.6
TRIO-201ENST00000344135 KIF20BQ96Q89 1820 aa11.29□□□□□ -0.6
TRIO-201ENST00000344135 PLIN1O60240 522 aa11.29□□□□□ -0.6
TRIO-201ENST00000344135 PIK3R4Q99570 1358 aa11.29□□□□□ -0.6
TRIO-201ENST00000344135 NALCNQ8IZF0 1738 aa11.29□□□□□ -0.6
TRIO-201ENST00000344135 ZNF521Q96K83 1311 aa11.29□□□□□ -0.6
TRIO-201ENST00000344135 FOXO3O43524 673 aa11.29□□□□□ -0.6
TRIO-201ENST00000344135 DDX17Q92841 729 aaKnown RBP11.29□□□□□ -0.6
TRIO-201ENST00000344135 DIAPH1O60610 1272 aaKnown RBP11.28□□□□□ -0.6
TRIO-201ENST00000344135 MON2Q7Z3U7 1717 aa11.27□□□□□ -0.6
TRIO-201ENST00000344135 DUSP27Q5VZP5 1158 aa11.27□□□□□ -0.6
TRIO-201ENST00000344135 ITSN1Q15811 1721 aa11.27□□□□□ -0.61
TRIO-201ENST00000344135 HSP90AB2PQ58FF8 381 aa11.27□□□□□ -0.61
TRIO-201ENST00000344135 WWC1Q8IX03 1113 aa11.27□□□□□ -0.61
TRIO-201ENST00000344135 RUNDC1Q96C34 613 aa11.27□□□□□ -0.61
TRIO-201ENST00000344135 COL3A1P02461 1466 aaPredicted RBP11.27□□□□□ -0.61
TRIO-201ENST00000344135 AKAP12Q02952 1782 aa11.27□□□□□ -0.61
TRIO-201ENST00000344135 TOPAZ1Q8N9V7 1692 aa11.27□□□□□ -0.61
TRIO-201ENST00000344135 NLRP6P59044 892 aa11.27□□□□□ -0.61
TRIO-201ENST00000344135 GOLGA2Q08379 1002 aa11.27□□□□□ -0.61
TRIO-201ENST00000344135 RCAN3Q9UKA8 241 aa11.27□□□□□ -0.61
TRIO-201ENST00000344135 PHF8Q9UPP1 1060 aa11.26□□□□□ -0.61
TRIO-201ENST00000344135 ANKRD26Q9UPS8 1709 aa11.26□□□□□ -0.61
TRIO-201ENST00000344135 ABTB2Q8N961 1025 aa11.25□□□□□ -0.61
TRIO-201ENST00000344135 PHACTR3Q96KR7 559 aa11.25□□□□□ -0.61
TRIO-201ENST00000344135 PLEKHF1Q96S99 279 aa11.25□□□□□ -0.61
TRIO-201ENST00000344135 PNPLA6Q8IY17 1366 aa11.25□□□□□ -0.61
TRIO-201ENST00000344135 SSH2Q76I76 1423 aa11.25□□□□□ -0.61
TRIO-201ENST00000344135 LMOD2Q6P5Q4 547 aa11.25□□□□□ -0.61
TRIO-201ENST00000344135 AEBP1Q8IUX7 1158 aa11.25□□□□□ -0.61
TRIO-201ENST00000344135 PRKAR2BP31323 418 aa11.25□□□□□ -0.61
TRIO-201ENST00000344135 ADGRL3Q9HAR2 1447 aa11.24□□□□□ -0.61
TRIO-201ENST00000344135 PDE3BQ13370 1112 aa11.24□□□□□ -0.61
TRIO-201ENST00000344135 INSRP06213 1382 aa11.24□□□□□ -0.61
TRIO-201ENST00000344135 TMEM94Q12767 1356 aa11.24□□□□□ -0.61
TRIO-201ENST00000344135 SLFN5Q08AF3 891 aa11.24□□□□□ -0.61
TRIO-201ENST00000344135 B4GALNT3Q6L9W6 998 aa11.24□□□□□ -0.61
TRIO-201ENST00000344135 OVOS2A0A0J9YW53 1432 aa11.23□□□□□ -0.61
TRIO-201ENST00000344135 OVOS2Q6IE36 1432 aa11.23□□□□□ -0.61
TRIO-201ENST00000344135 MAP3K19Q56UN5 1328 aa11.23□□□□□ -0.61
TRIO-201ENST00000344135 IL13P35225 146 aa11.23□□□□□ -0.61
TRIO-201ENST00000344135 PSME1Q06323 249 aa11.23□□□□□ -0.61
TRIO-201ENST00000344135 LMTK3Q96Q04 1460 aa11.23□□□□□ -0.61
TRIO-201ENST00000344135 ZBTB7CA1YPR0 619 aa11.23□□□□□ -0.61
TRIO-201ENST00000344135 THUMPD2Q9BTF0 503 aaKnown RBP11.23□□□□□ -0.61
TRIO-201ENST00000344135 NRKQ7Z2Y5 1582 aa11.23□□□□□ -0.61
TRIO-201ENST00000344135 ZNF335Q9H4Z2 1342 aaPredicted RBP11.23□□□□□ -0.61
TRIO-201ENST00000344135 STRCP1A6NGW2 1772 aa11.23□□□□□ -0.61
TRIO-201ENST00000344135 FMN2Q9NZ56 1722 aa11.23□□□□□ -0.61
TRIO-201ENST00000344135 EIF4A2Q14240 407 aaKnown RBP11.22□□□□□ -0.61
TRIO-201ENST00000344135 C20orf194Q5TEA3 1177 aa11.22□□□□□ -0.61
TRIO-201ENST00000344135 TMPOP42166 694 aaKnown RBP11.22□□□□□ -0.61
TRIO-201ENST00000344135 RSPH6AQ9H0K4 717 aa11.22□□□□□ -0.61
TRIO-201ENST00000344135 TSR2Q969E8 191 aaKnown RBP11.21□□□□□ -0.61
TRIO-201ENST00000344135 RRP1P56182 461 aaKnown RBP11.21□□□□□ -0.61
TRIO-201ENST00000344135 LTV1Q96GA3 475 aaPredicted RBP11.21□□□□□ -0.61
TRIO-201ENST00000344135 IQSEC2Q5JU85 1478 aa11.21□□□□□ -0.62
TRIO-201ENST00000344135 C19orf44Q9H6X5 657 aa11.21□□□□□ -0.62
TRIO-201ENST00000344135 TRIM35Q9UPQ4 493 aa11.21□□□□□ -0.62
TRIO-201ENST00000344135 RNF123Q5XPI4 1314 aa11.21□□□□□ -0.62
TRIO-201ENST00000344135 MAPK8IP3Q9UPT6 1336 aa11.21□□□□□ -0.62
TRIO-201ENST00000344135 BCAR3O75815 825 aa11.2□□□□□ -0.62
TRIO-201ENST00000344135 RIPK4P57078 832 aa11.2□□□□□ -0.62
TRIO-201ENST00000344135 PIK3C2AO00443 1686 aa11.2□□□□□ -0.62
TRIO-201ENST00000344135 ANKARQ7Z5J8 1434 aa11.2□□□□□ -0.62
TRIO-201ENST00000344135 AATKQ6ZMQ8 1374 aa11.2□□□□□ -0.62
TRIO-201ENST00000344135 SULT6B1Q6IMI4 303 aa11.2□□□□□ -0.62
TRIO-201ENST00000344135 BCL2L13Q9BXK5 485 aa11.2□□□□□ -0.62
TRIO-201ENST00000344135 LRRC7Q96NW7 1537 aa11.19□□□□□ -0.62
TRIO-201ENST00000344135 FAM83GA6ND36 823 aa11.19□□□□□ -0.62
TRIO-201ENST00000344135 TRMT2AQ8IZ69 625 aaKnown RBP11.19□□□□□ -0.62
TRIO-201ENST00000344135 TTC21AQ8NDW8 1320 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms