RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 EDC4Q6P2E9 1401 aaKnown RBP24.43■■□□□ 1.5
HOXA9-201ENST00000343483 SLFN5Q08AF3 891 aa24.42■■□□□ 1.5
HOXA9-201ENST00000343483 PRR36Q9H6K5 1346 aa24.42■■□□□ 1.5
HOXA9-201ENST00000343483 CDC42BPGQ6DT37 1551 aa24.41■■□□□ 1.5
HOXA9-201ENST00000343483 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.4■■□□□ 1.5
HOXA9-201ENST00000343483 NEUROD2Q15784 382 aa24.4■■□□□ 1.5
HOXA9-201ENST00000343483 ADGRB2O60241 1585 aa24.4■■□□□ 1.5
HOXA9-201ENST00000343483 TCP11L2Q8N4U5 519 aa24.39■■□□□ 1.5
HOXA9-201ENST00000343483 SPINK5Q9NQ38 1064 aaPredicted RBP24.39■■□□□ 1.5
HOXA9-201ENST00000343483 RRP7AQ9Y3A4 280 aaKnown RBP24.39■■□□□ 1.5
HOXA9-201ENST00000343483 U2SURPO15042 1029 aaKnown RBP24.39■■□□□ 1.49
HOXA9-201ENST00000343483 CCDC136Q96JN2 1154 aa24.39■■□□□ 1.49
HOXA9-201ENST00000343483 NUTM2FA1L443 756 aa24.38■■□□□ 1.49
HOXA9-201ENST00000343483 NME9Q86XW9 330 aa24.38■■□□□ 1.49
HOXA9-201ENST00000343483 WWC1Q8IX03 1113 aa24.38■■□□□ 1.49
HOXA9-201ENST00000343483 COL3A1P02461 1466 aaPredicted RBP24.37■■□□□ 1.49
HOXA9-201ENST00000343483 IQSEC2Q5JU85 1478 aa24.37■■□□□ 1.49
HOXA9-201ENST00000343483 DIP2AQ14689 1571 aa24.37■■□□□ 1.49
HOXA9-201ENST00000343483 E9PSI1 815 aa24.37■■□□□ 1.49
HOXA9-201ENST00000343483 PLIN1O60240 522 aa24.36■■□□□ 1.49
HOXA9-201ENST00000343483 TRMT2AQ8IZ69 625 aaKnown RBP24.36■■□□□ 1.49
HOXA9-201ENST00000343483 PTCH1Q13635 1447 aa24.36■■□□□ 1.49
HOXA9-201ENST00000343483 PPM1GO15355 546 aaPredicted RBP24.35■■□□□ 1.49
HOXA9-201ENST00000343483 FBLN1P23142 703 aa24.35■■□□□ 1.49
HOXA9-201ENST00000343483 ZNF692Q9BU19 519 aaPredicted RBP24.34■■□□□ 1.49
HOXA9-201ENST00000343483 DIAPH1O60610 1272 aaKnown RBP24.33■■□□□ 1.49
HOXA9-201ENST00000343483 EXOC6Q8TAG9 804 aa24.33■■□□□ 1.49
HOXA9-201ENST00000343483 ZRANB1Q9UGI0 708 aa24.33■■□□□ 1.49
HOXA9-201ENST00000343483 STRCP1A6NGW2 1772 aa24.33■■□□□ 1.49
HOXA9-201ENST00000343483 PNPLA6Q8IY17 1366 aa24.32■■□□□ 1.48
HOXA9-201ENST00000343483 LTBP4Q8N2S1 1624 aa24.32■■□□□ 1.48
HOXA9-201ENST00000343483 NKTRP30414 1462 aaKnown RBP24.32■■□□□ 1.48
HOXA9-201ENST00000343483 POLKQ9UBT6 870 aa24.32■■□□□ 1.48
HOXA9-201ENST00000343483 MON2Q7Z3U7 1717 aa24.31■■□□□ 1.48
HOXA9-201ENST00000343483 COG3Q96JB2 828 aa24.31■■□□□ 1.48
HOXA9-201ENST00000343483 ITSN1Q15811 1721 aa24.31■■□□□ 1.48
HOXA9-201ENST00000343483 ACEP12821 1306 aa24.3■■□□□ 1.48
HOXA9-201ENST00000343483 AKAP12Q02952 1782 aa24.28■■□□□ 1.48
HOXA9-201ENST00000343483 KCNA6P17658 529 aa24.28■■□□□ 1.48
HOXA9-201ENST00000343483 PHF23Q9BUL5 403 aaPredicted RBP24.28■■□□□ 1.48
HOXA9-201ENST00000343483 PLEKHG3A1L390 1219 aa24.28■■□□□ 1.48
HOXA9-201ENST00000343483 TOPAZ1Q8N9V7 1692 aa24.27■■□□□ 1.48
HOXA9-201ENST00000343483 EMILIN1Q9Y6C2 1016 aa24.27■■□□□ 1.48
HOXA9-201ENST00000343483 XRN1Q8IZH2 1706 aaKnown RBP24.27■■□□□ 1.48
HOXA9-201ENST00000343483 MAPK8IP3Q9UPT6 1336 aa24.27■■□□□ 1.48
HOXA9-201ENST00000343483 CCDC27Q2M243 656 aa24.26■■□□□ 1.47
HOXA9-201ENST00000343483 RBM33Q96EV2 1170 aaKnown RBP24.26■■□□□ 1.47
HOXA9-201ENST00000343483 PLEKHF1Q96S99 279 aa24.26■■□□□ 1.47
HOXA9-201ENST00000343483 PIK3R4Q99570 1358 aa24.26■■□□□ 1.47
HOXA9-201ENST00000343483 WDR63Q8IWG1 891 aa24.25■■□□□ 1.47
HOXA9-201ENST00000343483 CERKQ8TCT0 537 aa24.25■■□□□ 1.47
HOXA9-201ENST00000343483 TTC21BQ7Z4L5 1316 aa24.24■■□□□ 1.47
HOXA9-201ENST00000343483 AATKQ6ZMQ8 1374 aa24.24■■□□□ 1.47
HOXA9-201ENST00000343483 FANCIQ9NVI1 1328 aa24.23■■□□□ 1.47
HOXA9-201ENST00000343483 USP6P35125 1406 aa24.23■■□□□ 1.47
HOXA9-201ENST00000343483 C20orf194Q5TEA3 1177 aa24.23■■□□□ 1.47
HOXA9-201ENST00000343483 CRBNQ96SW2 442 aa24.23■■□□□ 1.47
HOXA9-201ENST00000343483 MYT1Q01538 1121 aa24.22■■□□□ 1.47
HOXA9-201ENST00000343483 NCBP3Q53F19 620 aaKnown RBP24.22■■□□□ 1.47
HOXA9-201ENST00000343483 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.22■■□□□ 1.47
HOXA9-201ENST00000343483 PMFBP1Q8TBY8 1022 aa24.22■■□□□ 1.47
HOXA9-201ENST00000343483 RRS1Q15050 365 aaKnown RBP24.22■■□□□ 1.47
HOXA9-201ENST00000343483 PNNQ9H307 717 aaKnown RBP24.22■■□□□ 1.47
HOXA9-201ENST00000343483 TMPOP42166 694 aaKnown RBP24.2■■□□□ 1.47
HOXA9-201ENST00000343483 NRKQ7Z2Y5 1582 aa24.2■■□□□ 1.46
HOXA9-201ENST00000343483 CDK12Q9NYV4 1490 aaPredicted RBP24.2■■□□□ 1.46
HOXA9-201ENST00000343483 MAP2P11137 1827 aaKnown RBP24.19■■□□□ 1.46
HOXA9-201ENST00000343483 FCHSD2O94868 740 aa24.19■■□□□ 1.46
HOXA9-201ENST00000343483 BCAR3O75815 825 aa24.18■■□□□ 1.46
HOXA9-201ENST00000343483 NGDNQ8NEJ9 315 aaKnown RBP24.18■■□□□ 1.46
HOXA9-201ENST00000343483 CHD2O14647 1828 aaKnown RBP24.17■■□□□ 1.46
HOXA9-201ENST00000343483 LRRC7Q96NW7 1537 aa24.16■■□□□ 1.46
HOXA9-201ENST00000343483 PRKAR2BP31323 418 aa24.16■■□□□ 1.46
HOXA9-201ENST00000343483 MYH16Q9H6N6 1097 aa24.16■■□□□ 1.46
HOXA9-201ENST00000343483 IL13P35225 146 aa24.15■■□□□ 1.46
HOXA9-201ENST00000343483 ANP32EQ9BTT0 268 aa24.15■■□□□ 1.46
HOXA9-201ENST00000343483 RSPH6AQ9H0K4 717 aa24.15■■□□□ 1.46
HOXA9-201ENST00000343483 HMOX1P09601 288 aa24.15■■□□□ 1.46
HOXA9-201ENST00000343483 OVOS2A0A0J9YW53 1432 aa24.15■■□□□ 1.46
HOXA9-201ENST00000343483 OVOS2Q6IE36 1432 aa24.15■■□□□ 1.46
HOXA9-201ENST00000343483 NEFMP07197 916 aa24.14■■□□□ 1.46
HOXA9-201ENST00000343483 RIPK4P57078 832 aa24.14■■□□□ 1.46
HOXA9-201ENST00000343483 TRIM35Q9UPQ4 493 aa24.14■■□□□ 1.46
HOXA9-201ENST00000343483 SSH2Q76I76 1423 aa24.13■■□□□ 1.45
HOXA9-201ENST00000343483 ANKARQ7Z5J8 1434 aa24.13■■□□□ 1.45
HOXA9-201ENST00000343483 TTC21AQ8NDW8 1320 aa24.12■■□□□ 1.45
HOXA9-201ENST00000343483 XIRP1Q702N8 1843 aaKnown RBP24.12■■□□□ 1.45
HOXA9-201ENST00000343483 SOX12O15370 315 aa24.11■■□□□ 1.45
HOXA9-201ENST00000343483 PROSER2Q86WR7 435 aaPredicted RBP24.11■■□□□ 1.45
HOXA9-201ENST00000343483 MSH5O43196 834 aa24.1■■□□□ 1.45
HOXA9-201ENST00000343483 RGPD8O14715 1765 aaPredicted RBP24.1■■□□□ 1.45
HOXA9-201ENST00000343483 NWD1Q149M9 1564 aa24.09■■□□□ 1.45
HOXA9-201ENST00000343483 TSR2Q969E8 191 aaKnown RBP24.09■■□□□ 1.45
HOXA9-201ENST00000343483 TMEM94Q12767 1356 aa24.08■■□□□ 1.45
HOXA9-201ENST00000343483 CANXP27824 592 aaKnown RBP24.08■■□□□ 1.45
HOXA9-201ENST00000343483 RARSP54136 660 aaKnown RBP24.07■■□□□ 1.44
HOXA9-201ENST00000343483 PHACTR3Q96KR7 559 aa24.07■■□□□ 1.44
HOXA9-201ENST00000343483 FMN2Q9NZ56 1722 aa24.07■■□□□ 1.44
HOXA9-201ENST00000343483 USP31Q70CQ4 1352 aa24.07■■□□□ 1.44
HOXA9-201ENST00000343483 NALCNQ8IZF0 1738 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms