RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 PAK3O75914 559 aaPredicted RBP18.32■□□□□ 0.52
HLA-DQA1-201ENST00000343139 ZNF772Q68DY9 489 aaPredicted RBP18.32■□□□□ 0.52
HLA-DQA1-201ENST00000343139 LMOD2Q6P5Q4 547 aa18.31■□□□□ 0.52
HLA-DQA1-201ENST00000343139 FNBP4Q8N3X1 1017 aaPredicted RBP18.3■□□□□ 0.52
HLA-DQA1-201ENST00000343139 ADAMTS2O95450 1211 aa18.3■□□□□ 0.52
HLA-DQA1-201ENST00000343139 C8orf37Q96NL8 207 aa18.29■□□□□ 0.52
HLA-DQA1-201ENST00000343139 TERF2IPQ9NYB0 399 aa18.29■□□□□ 0.52
HLA-DQA1-201ENST00000343139 CD163L1Q9NR16 1453 aa18.28■□□□□ 0.52
HLA-DQA1-201ENST00000343139 TTC21AQ8NDW8 1320 aa18.28■□□□□ 0.52
HLA-DQA1-201ENST00000343139 ABTB2Q8N961 1025 aa18.28■□□□□ 0.52
HLA-DQA1-201ENST00000343139 NGLY1Q96IV0 654 aa18.28■□□□□ 0.52
HLA-DQA1-201ENST00000343139 HSPA5P11021 654 aaKnown RBP18.27■□□□□ 0.52
HLA-DQA1-201ENST00000343139 HDGFL2Q7Z4V5 671 aaPredicted RBP18.27■□□□□ 0.52
HLA-DQA1-201ENST00000343139 TMC1Q8TDI8 760 aa18.27■□□□□ 0.52
HLA-DQA1-201ENST00000343139 SLC12A5Q9H2X9 1139 aa18.27■□□□□ 0.52
HLA-DQA1-201ENST00000343139 KTN1Q86UP2 1357 aaKnown RBP18.27■□□□□ 0.52
HLA-DQA1-201ENST00000343139 USP19O94966 1318 aa18.27■□□□□ 0.51
HLA-DQA1-201ENST00000343139 AFF2P51816 1311 aa18.27■□□□□ 0.51
HLA-DQA1-201ENST00000343139 HAP1P54257 671 aaPredicted RBP18.26■□□□□ 0.51
HLA-DQA1-201ENST00000343139 NLRP13Q86W25 1043 aa18.26■□□□□ 0.51
HLA-DQA1-201ENST00000343139 CABLES1Q8TDN4 633 aa18.26■□□□□ 0.51
HLA-DQA1-201ENST00000343139 TTC21BQ7Z4L5 1316 aa18.26■□□□□ 0.51
HLA-DQA1-201ENST00000343139 POTEAQ6S8J7 498 aa18.24■□□□□ 0.51
HLA-DQA1-201ENST00000343139 EDC4Q6P2E9 1401 aaKnown RBP18.24■□□□□ 0.51
HLA-DQA1-201ENST00000343139 AKAP12Q02952 1782 aa18.24■□□□□ 0.51
HLA-DQA1-201ENST00000343139 SLIT2O94813 1529 aa18.23■□□□□ 0.51
HLA-DQA1-201ENST00000343139 A0A1W2PP64 1363 aa18.23■□□□□ 0.51
HLA-DQA1-201ENST00000343139 ANKRD36BQ8N2N9 1353 aa18.23■□□□□ 0.51
HLA-DQA1-201ENST00000343139 ABCA3Q99758 1704 aa18.23■□□□□ 0.51
HLA-DQA1-201ENST00000343139 CRYBG1Q9Y4K1 1723 aa18.22■□□□□ 0.51
HLA-DQA1-201ENST00000343139 NRKQ7Z2Y5 1582 aa18.22■□□□□ 0.51
HLA-DQA1-201ENST00000343139 BCL9LQ86UU0 1499 aa18.21■□□□□ 0.51
HLA-DQA1-201ENST00000343139 NLRP6P59044 892 aa18.21■□□□□ 0.51
HLA-DQA1-201ENST00000343139 ILDR2Q71H61 639 aa18.21■□□□□ 0.51
HLA-DQA1-201ENST00000343139 USP21Q9UK80 565 aa18.21■□□□□ 0.51
HLA-DQA1-201ENST00000343139 USP31Q70CQ4 1352 aa18.21■□□□□ 0.51
HLA-DQA1-201ENST00000343139 MON2Q7Z3U7 1717 aa18.21■□□□□ 0.51
HLA-DQA1-201ENST00000343139 MARF1Q9Y4F3 1742 aaKnown RBP18.21■□□□□ 0.51
HLA-DQA1-201ENST00000343139 CPDO75976 1380 aa18.2■□□□□ 0.5
HLA-DQA1-201ENST00000343139 FAM83GA6ND36 823 aa18.2■□□□□ 0.5
HLA-DQA1-201ENST00000343139 GCP02774 474 aa18.2■□□□□ 0.5
HLA-DQA1-201ENST00000343139 TRPC5Q9UL62 973 aaPredicted RBP18.2■□□□□ 0.5
HLA-DQA1-201ENST00000343139 NUTM2GQ5VZR2 741 aa18.19■□□□□ 0.5
HLA-DQA1-201ENST00000343139 UNC5CLQ8IV45 518 aa18.19■□□□□ 0.5
HLA-DQA1-201ENST00000343139 SLIT3O75094 1523 aa18.19■□□□□ 0.5
HLA-DQA1-201ENST00000343139 QTRT2Q9H974 415 aaKnown RBP18.18■□□□□ 0.5
HLA-DQA1-201ENST00000343139 PIK3C2AO00443 1686 aa18.18■□□□□ 0.5
HLA-DQA1-201ENST00000343139 KCNH5Q8NCM2 988 aa18.17■□□□□ 0.5
HLA-DQA1-201ENST00000343139 ATRNO75882 1429 aa18.17■□□□□ 0.5
HLA-DQA1-201ENST00000343139 PHRF1Q9P1Y6 1649 aaKnown RBP18.17■□□□□ 0.5
HLA-DQA1-201ENST00000343139 RXRBP28702 533 aa18.17■□□□□ 0.5
HLA-DQA1-201ENST00000343139 RBM6P78332 1123 aaKnown RBP18.17■□□□□ 0.5
HLA-DQA1-201ENST00000343139 PRDM11Q9NQV5 511 aa18.17■□□□□ 0.5
HLA-DQA1-201ENST00000343139 CDK12Q9NYV4 1490 aaPredicted RBP18.17■□□□□ 0.5
HLA-DQA1-201ENST00000343139 KIAA0232Q92628 1395 aa18.16■□□□□ 0.5
HLA-DQA1-201ENST00000343139 PLEKHG5O94827 1062 aa18.15■□□□□ 0.5
HLA-DQA1-201ENST00000343139 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.15■□□□□ 0.5
HLA-DQA1-201ENST00000343139 COL14A1Q05707 1796 aaKnown RBP18.15■□□□□ 0.5
HLA-DQA1-201ENST00000343139 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.15■□□□□ 0.5
HLA-DQA1-201ENST00000343139 NWD2Q9ULI1 1742 aa18.14■□□□□ 0.49
HLA-DQA1-201ENST00000343139 USP54Q70EL1 1684 aa18.14■□□□□ 0.49
HLA-DQA1-201ENST00000343139 VPS72Q15906 364 aa18.13■□□□□ 0.49
HLA-DQA1-201ENST00000343139 ZC3H6P61129 1189 aaKnown RBP18.13■□□□□ 0.49
HLA-DQA1-201ENST00000343139 NME9Q86XW9 330 aa18.13■□□□□ 0.49
HLA-DQA1-201ENST00000343139 BTG4Q9NY30 223 aa18.13■□□□□ 0.49
HLA-DQA1-201ENST00000343139 OVOS2A0A0J9YW53 1432 aa18.12■□□□□ 0.49
HLA-DQA1-201ENST00000343139 OVOS2Q6IE36 1432 aa18.12■□□□□ 0.49
HLA-DQA1-201ENST00000343139 GJD4Q96KN9 370 aaPredicted RBP18.12■□□□□ 0.49
HLA-DQA1-201ENST00000343139 MYOM1P52179 1685 aa18.12■□□□□ 0.49
HLA-DQA1-201ENST00000343139 AATKQ6ZMQ8 1374 aa18.11■□□□□ 0.49
HLA-DQA1-201ENST00000343139 C11orf95C9JLR9 678 aaPredicted RBP18.11■□□□□ 0.49
HLA-DQA1-201ENST00000343139 ARHGEF25Q86VW2 580 aa18.1■□□□□ 0.49
HLA-DQA1-201ENST00000343139 PLCH1Q4KWH8 1693 aa18.1■□□□□ 0.49
HLA-DQA1-201ENST00000343139 CARD14Q9BXL6 1004 aa18.09■□□□□ 0.49
HLA-DQA1-201ENST00000343139 FYB1O15117 783 aa18.08■□□□□ 0.49
HLA-DQA1-201ENST00000343139 NFAT5O94916 1531 aa18.08■□□□□ 0.49
HLA-DQA1-201ENST00000343139 KIF7Q2M1P5 1343 aa18.08■□□□□ 0.48
HLA-DQA1-201ENST00000343139 ABCC6O95255 1503 aa18.08■□□□□ 0.48
HLA-DQA1-201ENST00000343139 CHRNA2Q15822 529 aa18.08■□□□□ 0.48
HLA-DQA1-201ENST00000343139 COG3Q96JB2 828 aa18.08■□□□□ 0.48
HLA-DQA1-201ENST00000343139 ZRANB1Q9UGI0 708 aa18.08■□□□□ 0.48
HLA-DQA1-201ENST00000343139 LMO7Q8WWI1 1683 aa18.07■□□□□ 0.48
HLA-DQA1-201ENST00000343139 SOCS7O14512 581 aa18.07■□□□□ 0.48
HLA-DQA1-201ENST00000343139 NRAPQ86VF7 1730 aa18.06■□□□□ 0.48
HLA-DQA1-201ENST00000343139 ONECUT3O60422 494 aaPredicted RBP18.06■□□□□ 0.48
HLA-DQA1-201ENST00000343139 NSD3Q9BZ95 1437 aa18.06■□□□□ 0.48
HLA-DQA1-201ENST00000343139 POLR3GLQ9BT43 218 aa18.05■□□□□ 0.48
HLA-DQA1-201ENST00000343139 CGNL1Q0VF96 1302 aa18.05■□□□□ 0.48
HLA-DQA1-201ENST00000343139 CAMTA1Q9Y6Y1 1673 aa18.05■□□□□ 0.48
HLA-DQA1-201ENST00000343139 ZEB1P37275 1124 aaPredicted RBP18.04■□□□□ 0.48
HLA-DQA1-201ENST00000343139 RGS12O14924 1447 aa18.04■□□□□ 0.48
HLA-DQA1-201ENST00000343139 SPATA31A5Q5VU36 1347 aa18.04■□□□□ 0.48
HLA-DQA1-201ENST00000343139 SPATA31A7Q8IWB4 1347 aa18.04■□□□□ 0.48
HLA-DQA1-201ENST00000343139 PANK3Q9H999 370 aa18.04■□□□□ 0.48
HLA-DQA1-201ENST00000343139 COL5A2P05997 1499 aaPredicted RBP18.03■□□□□ 0.48
HLA-DQA1-201ENST00000343139 GLI3P10071 1580 aa18.03■□□□□ 0.48
HLA-DQA1-201ENST00000343139 EVA1CP58658 441 aa18.02■□□□□ 0.48
HLA-DQA1-201ENST00000343139 CCDC7Q96M83 1385 aa18.02■□□□□ 0.47
HLA-DQA1-201ENST00000343139 GGNBP2Q9H3C7 697 aa18.01■□□□□ 0.47
HLA-DQA1-201ENST00000343139 SPATA31A1Q5TZJ5 1347 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms