RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 ABCA10Q8WWZ4 1543 aa9.74□□□□□ -0.85
UBE4B-202ENST00000343090 RNF20Q5VTR2 975 aa9.74□□□□□ -0.85
UBE4B-202ENST00000343090 CCAR2Q8N163 923 aaKnown RBP9.74□□□□□ -0.85
UBE4B-202ENST00000343090 THUMPD2Q9BTF0 503 aaKnown RBP9.74□□□□□ -0.85
UBE4B-202ENST00000343090 NSD3Q9BZ95 1437 aa9.74□□□□□ -0.85
UBE4B-202ENST00000343090 PLB1Q6P1J6 1458 aa9.74□□□□□ -0.85
UBE4B-202ENST00000343090 ERC2O15083 957 aa9.74□□□□□ -0.85
UBE4B-202ENST00000343090 NLRP2Q9NX02 1062 aa9.74□□□□□ -0.85
UBE4B-202ENST00000343090 CPLX1O14810 134 aa9.74□□□□□ -0.85
UBE4B-202ENST00000343090 MAP4K4O95819 1239 aaPredicted RBP9.74□□□□□ -0.85
UBE4B-202ENST00000343090 XRCC6P12956 609 aaKnown RBP eCLIP9.74□□□□□ -0.85
UBE4B-202ENST00000343090 ABTB2Q8N961 1025 aa9.74□□□□□ -0.85
UBE4B-202ENST00000343090 KDM4AO75164 1064 aa9.73□□□□□ -0.85
UBE4B-202ENST00000343090 GCC1Q96CN9 775 aa9.73□□□□□ -0.85
UBE4B-202ENST00000343090 PANK2Q9BZ23 570 aa9.73□□□□□ -0.85
UBE4B-202ENST00000343090 CCDC30Q5VVM6 783 aa9.73□□□□□ -0.85
UBE4B-202ENST00000343090 NCOA1Q15788 1441 aa9.73□□□□□ -0.85
UBE4B-202ENST00000343090 TPD52L1Q16890 204 aaPredicted RBP9.73□□□□□ -0.85
UBE4B-202ENST00000343090 HSP90AB4PQ58FF6 505 aa9.73□□□□□ -0.85
UBE4B-202ENST00000343090 CHD1LQ86WJ1 897 aa9.73□□□□□ -0.85
UBE4B-202ENST00000343090 TMEM57Q8N5G2 664 aa9.73□□□□□ -0.85
UBE4B-202ENST00000343090 RAPGEF4Q8WZA2 1011 aa9.73□□□□□ -0.85
UBE4B-202ENST00000343090 IQGAP2Q13576 1575 aa9.72□□□□□ -0.85
UBE4B-202ENST00000343090 BICRAQ9NZM4 1560 aa9.72□□□□□ -0.85
UBE4B-202ENST00000343090 GNAI3P08754 354 aa9.72□□□□□ -0.85
UBE4B-202ENST00000343090 AKAP17AQ02040 695 aaKnown RBP9.72□□□□□ -0.85
UBE4B-202ENST00000343090 MAPK8IP2Q13387 824 aaPredicted RBP9.72□□□□□ -0.85
UBE4B-202ENST00000343090 SYNE3Q6ZMZ3 975 aa9.72□□□□□ -0.85
UBE4B-202ENST00000343090 FSD1Q9BTV5 496 aa9.72□□□□□ -0.85
UBE4B-202ENST00000343090 MPNDQ8N594 471 aa9.71□□□□□ -0.85
UBE4B-202ENST00000343090 NOC3LQ8WTT2 800 aaKnown RBP9.71□□□□□ -0.85
UBE4B-202ENST00000343090 KIAA0586Q9BVV6 1533 aa9.71□□□□□ -0.85
UBE4B-202ENST00000343090 GNAI2P04899 355 aa9.71□□□□□ -0.85
UBE4B-202ENST00000343090 TMPOP42166 694 aaKnown RBP9.71□□□□□ -0.85
UBE4B-202ENST00000343090 CNTROBQ8N137 903 aa9.71□□□□□ -0.85
UBE4B-202ENST00000343090 PLEKHH2Q8IVE3 1493 aa9.71□□□□□ -0.85
UBE4B-202ENST00000343090 RABEP1Q15276 862 aa9.71□□□□□ -0.86
UBE4B-202ENST00000343090 SASS6Q6UVJ0 657 aa9.71□□□□□ -0.86
UBE4B-202ENST00000343090 GAS2L2Q8NHY3 880 aa9.71□□□□□ -0.86
UBE4B-202ENST00000343090 WASHC4Q2M389 1173 aa9.7□□□□□ -0.86
UBE4B-202ENST00000343090 NFXL1Q6ZNB6 911 aa9.7□□□□□ -0.86
UBE4B-202ENST00000343090 CLASRPQ8N2M8 674 aaKnown RBP9.7□□□□□ -0.86
UBE4B-202ENST00000343090 TPM3P06753 285 aa9.7□□□□□ -0.86
UBE4B-202ENST00000343090 CBX1P83916 185 aa9.7□□□□□ -0.86
UBE4B-202ENST00000343090 TRIM29Q14134 588 aa9.7□□□□□ -0.86
UBE4B-202ENST00000343090 DNAJC2Q99543 621 aaKnown RBP9.7□□□□□ -0.86
UBE4B-202ENST00000343090 MIS18AQ9NYP9 233 aa9.7□□□□□ -0.86
UBE4B-202ENST00000343090 MAPKBP1O60336 1514 aa9.7□□□□□ -0.86
UBE4B-202ENST00000343090 G3V3G9 751 aa9.7□□□□□ -0.86
UBE4B-202ENST00000343090 MARCH6O60337 910 aa9.7□□□□□ -0.86
UBE4B-202ENST00000343090 DCAF8Q5TAQ9 597 aa9.7□□□□□ -0.86
UBE4B-202ENST00000343090 VPS53Q5VIR6 699 aa9.7□□□□□ -0.86
UBE4B-202ENST00000343090 CPLX2Q6PUV4 134 aaKnown RBP9.7□□□□□ -0.86
UBE4B-202ENST00000343090 NCBP3Q53F19 620 aaKnown RBP9.7□□□□□ -0.86
UBE4B-202ENST00000343090 MAGI1Q96QZ7 1491 aaPredicted RBP9.7□□□□□ -0.86
UBE4B-202ENST00000343090 PTPRKQ15262 1439 aa9.7□□□□□ -0.86
UBE4B-202ENST00000343090 FIBPO43427 364 aa9.69□□□□□ -0.86
UBE4B-202ENST00000343090 DCTN1Q14203 1278 aa9.69□□□□□ -0.86
UBE4B-202ENST00000343090 ESCO1Q5FWF5 840 aa9.69□□□□□ -0.86
UBE4B-202ENST00000343090 HDGFL1Q5TGJ6 251 aa9.69□□□□□ -0.86
UBE4B-202ENST00000343090 CCDC66A2RUB6 948 aa9.69□□□□□ -0.86
UBE4B-202ENST00000343090 K7ELQ4 463 aaPredicted RBP9.69□□□□□ -0.86
UBE4B-202ENST00000343090 HMGN5P82970 282 aaKnown RBP9.69□□□□□ -0.86
UBE4B-202ENST00000343090 TRDNQ13061 729 aa9.69□□□□□ -0.86
UBE4B-202ENST00000343090 BBXQ8WY36 941 aaPredicted RBP9.69□□□□□ -0.86
UBE4B-202ENST00000343090 NINLQ9Y2I6 1382 aa9.69□□□□□ -0.86
UBE4B-202ENST00000343090 RARSP54136 660 aaKnown RBP9.69□□□□□ -0.86
UBE4B-202ENST00000343090 LRRFIP1Q32MZ4 808 aaKnown RBP9.69□□□□□ -0.86
UBE4B-202ENST00000343090 IFT57Q9NWB7 429 aa9.69□□□□□ -0.86
UBE4B-202ENST00000343090 MAP3K1Q13233 1512 aa9.69□□□□□ -0.86
UBE4B-202ENST00000343090 CCDC141Q6ZP82 1450 aa9.69□□□□□ -0.86
UBE4B-202ENST00000343090 XPCQ01831 940 aaPredicted RBP9.69□□□□□ -0.86
UBE4B-202ENST00000343090 SSH1Q8WYL5 1049 aa9.69□□□□□ -0.86
UBE4B-202ENST00000343090 SLC26A8Q96RN1 970 aa9.69□□□□□ -0.86
UBE4B-202ENST00000343090 SIL1Q9H173 461 aa9.69□□□□□ -0.86
UBE4B-202ENST00000343090 TMX4Q9H1E5 349 aaPredicted RBP9.69□□□□□ -0.86
UBE4B-202ENST00000343090 RTEL1-TNFRSF6BF6WH68 1400 aa9.68□□□□□ -0.86
UBE4B-202ENST00000343090 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.68□□□□□ -0.86
UBE4B-202ENST00000343090 ADGRF5Q8IZF2 1346 aa9.68□□□□□ -0.86
UBE4B-202ENST00000343090 DISP3Q9P2K9 1392 aa9.68□□□□□ -0.86
UBE4B-202ENST00000343090 RPRD2Q5VT52 1461 aaKnown RBP9.68□□□□□ -0.86
UBE4B-202ENST00000343090 CCDC73Q6ZRK6 1079 aa9.68□□□□□ -0.86
UBE4B-202ENST00000343090 WAPLQ7Z5K2 1190 aa9.68□□□□□ -0.86
UBE4B-202ENST00000343090 HOMER1Q86YM7 354 aa9.68□□□□□ -0.86
UBE4B-202ENST00000343090 CHMP4CQ96CF2 233 aa9.68□□□□□ -0.86
UBE4B-202ENST00000343090 LRRCC1Q9C099 1032 aa9.68□□□□□ -0.86
UBE4B-202ENST00000343090 CEBPZQ03701 1054 aaKnown RBP9.68□□□□□ -0.86
UBE4B-202ENST00000343090 IL1RAPL2Q9NP60 686 aa9.68□□□□□ -0.86
UBE4B-202ENST00000343090 CT47B1P0C2W7 299 aaPredicted RBP9.67□□□□□ -0.86
UBE4B-202ENST00000343090 DUSP27Q5VZP5 1158 aa9.67□□□□□ -0.86
UBE4B-202ENST00000343090 GOLGA6L1Q8N7Z2 621 aa9.67□□□□□ -0.86
UBE4B-202ENST00000343090 RAD21O60216 631 aa9.67□□□□□ -0.86
UBE4B-202ENST00000343090 SMARCA5O60264 1052 aaPredicted RBP9.67□□□□□ -0.86
UBE4B-202ENST00000343090 STK3Q13188 491 aa9.67□□□□□ -0.86
UBE4B-202ENST00000343090 MCM10Q7L590 875 aa9.67□□□□□ -0.86
UBE4B-202ENST00000343090 TBC1D2Q9BYX2 928 aa9.67□□□□□ -0.86
UBE4B-202ENST00000343090 FCHSD2O94868 740 aa9.66□□□□□ -0.86
UBE4B-202ENST00000343090 NFE2L2Q16236 605 aa9.66□□□□□ -0.86
UBE4B-202ENST00000343090 RALYLQ86SE5 291 aaKnown RBP9.66□□□□□ -0.86
UBE4B-202ENST00000343090 TSPY26PQ9H489 355 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms