RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 KIF14Q15058 1648 aa8.75□□□□□ -1.01
VCAN-202ENST00000342785 VPS37CA5D8V6 355 aaPredicted RBP8.75□□□□□ -1.01
VCAN-202ENST00000342785 NUDT16Q96DE0 195 aaKnown RBP8.75□□□□□ -1.01
VCAN-202ENST00000342785 SMC3Q9UQE7 1217 aa8.75□□□□□ -1.01
VCAN-202ENST00000342785 GNAI2P04899 355 aa8.75□□□□□ -1.01
VCAN-202ENST00000342785 ABTB2Q8N961 1025 aa8.75□□□□□ -1.01
VCAN-202ENST00000342785 HSP90AA2PQ14568 343 aaPredicted RBP8.75□□□□□ -1.01
VCAN-202ENST00000342785 RPAP2Q8IXW5 612 aaPredicted RBP8.75□□□□□ -1.01
VCAN-202ENST00000342785 CLASRPQ8N2M8 674 aaKnown RBP8.75□□□□□ -1.01
VCAN-202ENST00000342785 ERC2O15083 957 aa8.74□□□□□ -1.01
VCAN-202ENST00000342785 SF3A1Q15459 793 aaKnown RBP8.74□□□□□ -1.01
VCAN-202ENST00000342785 FAM184AQ8NB25 1140 aa8.74□□□□□ -1.01
VCAN-202ENST00000342785 EMILIN1Q9Y6C2 1016 aa8.74□□□□□ -1.01
VCAN-202ENST00000342785 H3BQV1 296 aa8.74□□□□□ -1.01
VCAN-202ENST00000342785 IFFO2Q5TF58 517 aa8.74□□□□□ -1.01
VCAN-202ENST00000342785 HDGFL1Q5TGJ6 251 aa8.74□□□□□ -1.01
VCAN-202ENST00000342785 FAM43AQ8N2R8 423 aa8.74□□□□□ -1.01
VCAN-202ENST00000342785 ADGRL1O94910 1474 aa8.74□□□□□ -1.01
VCAN-202ENST00000342785 AIMP1Q12904 312 aaKnown RBP8.74□□□□□ -1.01
VCAN-202ENST00000342785 NOS1P29475 1434 aa8.74□□□□□ -1.01
VCAN-202ENST00000342785 ABCC11Q96J66 1382 aa8.74□□□□□ -1.01
VCAN-202ENST00000342785 NASPP49321 788 aaPredicted RBP8.74□□□□□ -1.01
VCAN-202ENST00000342785 FBXO31Q5XUX0 539 aaPredicted RBP8.74□□□□□ -1.01
VCAN-202ENST00000342785 CAVIN1Q6NZI2 390 aaKnown RBP8.74□□□□□ -1.01
VCAN-202ENST00000342785 DCTN1Q14203 1278 aa8.74□□□□□ -1.01
VCAN-202ENST00000342785 RAPGEF4Q8WZA2 1011 aa8.74□□□□□ -1.01
VCAN-202ENST00000342785 K7ELQ4 463 aaPredicted RBP8.73□□□□□ -1.01
VCAN-202ENST00000342785 NME9Q86XW9 330 aa8.73□□□□□ -1.01
VCAN-202ENST00000342785 RNF214Q8ND24 703 aa8.73□□□□□ -1.01
VCAN-202ENST00000342785 RNF20Q5VTR2 975 aa8.73□□□□□ -1.01
VCAN-202ENST00000342785 CCT4P50991 539 aaKnown RBP8.73□□□□□ -1.01
VCAN-202ENST00000342785 CD109Q6YHK3 1445 aa8.73□□□□□ -1.01
VCAN-202ENST00000342785 NLRP2Q9NX02 1062 aa8.73□□□□□ -1.01
VCAN-202ENST00000342785 PCDHB15Q9Y5E8 787 aa8.73□□□□□ -1.01
VCAN-202ENST00000342785 PRPF40AO75400 957 aaKnown RBP8.73□□□□□ -1.01
VCAN-202ENST00000342785 ALDH1L2Q3SY69 923 aa8.73□□□□□ -1.01
VCAN-202ENST00000342785 TBC1D2Q9BYX2 928 aa8.73□□□□□ -1.01
VCAN-202ENST00000342785 CIZ1Q9ULV3 898 aaPredicted RBP8.73□□□□□ -1.01
VCAN-202ENST00000342785 PZPP20742 1482 aa8.73□□□□□ -1.01
VCAN-202ENST00000342785 GPRASP1Q5JY77 1395 aa8.73□□□□□ -1.01
VCAN-202ENST00000342785 TOMM22Q9NS69 142 aa8.73□□□□□ -1.01
VCAN-202ENST00000342785 PLEKHH1Q9ULM0 1364 aa8.72□□□□□ -1.01
VCAN-202ENST00000342785 MCM2P49736 904 aa8.72□□□□□ -1.01
VCAN-202ENST00000342785 SRCIN1Q9C0H9 1055 aa8.72□□□□□ -1.01
VCAN-202ENST00000342785 PLCH2O75038 1416 aa8.71□□□□□ -1.01
VCAN-202ENST00000342785 BECN2A8MW95 431 aa8.71□□□□□ -1.01
VCAN-202ENST00000342785 MBD3O95983 291 aa8.71□□□□□ -1.01
VCAN-202ENST00000342785 MCM10Q7L590 875 aa8.71□□□□□ -1.01
VCAN-202ENST00000342785 RIC3Q7Z5B4 369 aa8.71□□□□□ -1.01
VCAN-202ENST00000342785 CARD14Q9BXL6 1004 aa8.71□□□□□ -1.01
VCAN-202ENST00000342785 NUP160Q12769 1436 aa8.71□□□□□ -1.02
VCAN-202ENST00000342785 LRRCC1Q9C099 1032 aa8.71□□□□□ -1.02
VCAN-202ENST00000342785 IFT57Q9NWB7 429 aa8.71□□□□□ -1.02
VCAN-202ENST00000342785 ISY1Q9ULR0 285 aaKnown RBP8.71□□□□□ -1.02
VCAN-202ENST00000342785 MIS18AQ9NYP9 233 aa8.71□□□□□ -1.02
VCAN-202ENST00000342785 CHMP4CQ96CF2 233 aa8.7□□□□□ -1.02
VCAN-202ENST00000342785 EXOC6BQ9Y2D4 811 aa8.7□□□□□ -1.02
VCAN-202ENST00000342785 FBLN1P23142 703 aa8.7□□□□□ -1.02
VCAN-202ENST00000342785 SPINK5Q9NQ38 1064 aaPredicted RBP8.7□□□□□ -1.02
VCAN-202ENST00000342785 TEX14Q8IWB6 1497 aa8.7□□□□□ -1.02
VCAN-202ENST00000342785 TPM4P67936 248 aa8.7□□□□□ -1.02
VCAN-202ENST00000342785 CNTROBQ8N137 903 aa8.7□□□□□ -1.02
VCAN-202ENST00000342785 BICD2Q8TD16 824 aa8.7□□□□□ -1.02
VCAN-202ENST00000342785 GOLGA6L19H0YKK7 550 aa8.7□□□□□ -1.02
VCAN-202ENST00000342785 FYB1O15117 783 aa8.7□□□□□ -1.02
VCAN-202ENST00000342785 PLEKHO1Q53GL0 409 aaPredicted RBP8.7□□□□□ -1.02
VCAN-202ENST00000342785 IL1RAPL2Q9NP60 686 aa8.7□□□□□ -1.02
VCAN-202ENST00000342785 RNF123Q5XPI4 1314 aa8.7□□□□□ -1.02
VCAN-202ENST00000342785 THEMISQ8N1K5 641 aaPredicted RBP8.69□□□□□ -1.02
VCAN-202ENST00000342785 CCDC34Q96HJ3 373 aa8.69□□□□□ -1.02
VCAN-202ENST00000342785 WDR62O43379 1518 aa8.69□□□□□ -1.02
VCAN-202ENST00000342785 FANCAO15360 1455 aa8.69□□□□□ -1.02
VCAN-202ENST00000342785 CWC22Q9HCG8 908 aaKnown RBP8.69□□□□□ -1.02
VCAN-202ENST00000342785 RAPGEF6Q8TEU7 1601 aa8.69□□□□□ -1.02
VCAN-202ENST00000342785 ESCO1Q5FWF5 840 aa8.69□□□□□ -1.02
VCAN-202ENST00000342785 TRAPPC8Q9Y2L5 1435 aa8.69□□□□□ -1.02
VCAN-202ENST00000342785 ZNF530Q6P9A1 599 aaPredicted RBP8.69□□□□□ -1.02
VCAN-202ENST00000342785 NEUROD6Q96NK8 337 aa8.69□□□□□ -1.02
VCAN-202ENST00000342785 FSD1Q9BTV5 496 aa8.69□□□□□ -1.02
VCAN-202ENST00000342785 GRPEL1Q9HAV7 217 aa8.69□□□□□ -1.02
VCAN-202ENST00000342785 TNNQ9UQP3 1299 aa8.69□□□□□ -1.02
VCAN-202ENST00000342785 C8orf34Q49A92 452 aa8.69□□□□□ -1.02
VCAN-202ENST00000342785 TBC1D32Q96NH3 1257 aa8.69□□□□□ -1.02
VCAN-202ENST00000342785 NSD2O96028 1365 aa8.69□□□□□ -1.02
VCAN-202ENST00000342785 WASLO00401 505 aaPredicted RBP8.69□□□□□ -1.02
VCAN-202ENST00000342785 CPLX2Q6PUV4 134 aaKnown RBP8.69□□□□□ -1.02
VCAN-202ENST00000342785 UHRF1BP1Q6BDS2 1440 aa8.68□□□□□ -1.02
VCAN-202ENST00000342785 LRRFIP1Q32MZ4 808 aaKnown RBP8.68□□□□□ -1.02
VCAN-202ENST00000342785 FAM135AQ9P2D6 1515 aa8.68□□□□□ -1.02
VCAN-202ENST00000342785 RLBP1P12271 317 aa8.68□□□□□ -1.02
VCAN-202ENST00000342785 CPLX1O14810 134 aa8.68□□□□□ -1.02
VCAN-202ENST00000342785 SRGAP3O43295 1099 aa8.68□□□□□ -1.02
VCAN-202ENST00000342785 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.68□□□□□ -1.02
VCAN-202ENST00000342785 POLR3AO14802 1390 aaPredicted RBP8.68□□□□□ -1.02
VCAN-202ENST00000342785 SPATA31E1Q6ZUB1 1445 aa8.68□□□□□ -1.02
VCAN-202ENST00000342785 CFAP43Q8NDM7 1665 aa8.68□□□□□ -1.02
VCAN-202ENST00000342785 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.68□□□□□ -1.02
VCAN-202ENST00000342785 FAM13BQ9NYF5 915 aa8.68□□□□□ -1.02
VCAN-202ENST00000342785 IL16Q14005 1332 aa8.67□□□□□ -1.02
VCAN-202ENST00000342785 CCDC27Q2M243 656 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms