RNA–Protein interactions for RNA: ENST00000341491.8

ATF3-202, Transcript of activating transcription factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF3, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-202ENST00000341491 EDC4Q6P2E9 1401 aaKnown RBP18.33■□□□□ 0.53
ATF3-202ENST00000341491 NWD1Q149M9 1564 aa18.32■□□□□ 0.52
ATF3-202ENST00000341491 PPM1GO15355 546 aaPredicted RBP18.32■□□□□ 0.52
ATF3-202ENST00000341491 SOX12O15370 315 aa18.32■□□□□ 0.52
ATF3-202ENST00000341491 USP6P35125 1406 aa18.29■□□□□ 0.52
ATF3-202ENST00000341491 NGDNQ8NEJ9 315 aaKnown RBP18.29■□□□□ 0.52
ATF3-202ENST00000341491 ADGRL3Q9HAR2 1447 aa18.29■□□□□ 0.52
ATF3-202ENST00000341491 POLR3AO14802 1390 aaPredicted RBP18.29■□□□□ 0.52
ATF3-202ENST00000341491 IRX6P78412 446 aaPredicted RBP18.28■□□□□ 0.52
ATF3-202ENST00000341491 NUTM2GQ5VZR2 741 aa18.28■□□□□ 0.52
ATF3-202ENST00000341491 PROSER2Q86WR7 435 aaPredicted RBP18.28■□□□□ 0.52
ATF3-202ENST00000341491 RRS1Q15050 365 aaKnown RBP18.28■□□□□ 0.52
ATF3-202ENST00000341491 EMILIN1Q9Y6C2 1016 aa18.28■□□□□ 0.52
ATF3-202ENST00000341491 TTC21BQ7Z4L5 1316 aa18.27■□□□□ 0.52
ATF3-202ENST00000341491 PLEKHG3A1L390 1219 aa18.27■□□□□ 0.52
ATF3-202ENST00000341491 PLEKHG5O94827 1062 aa18.27■□□□□ 0.51
ATF3-202ENST00000341491 CDCA7LQ96GN5 454 aa18.27■□□□□ 0.51
ATF3-202ENST00000341491 SUPT16HQ9Y5B9 1047 aaKnown RBP18.27■□□□□ 0.51
ATF3-202ENST00000341491 PIK3C2AO00443 1686 aa18.26■□□□□ 0.51
ATF3-202ENST00000341491 COL3A1P02461 1466 aaPredicted RBP18.25■□□□□ 0.51
ATF3-202ENST00000341491 XPCQ01831 940 aaPredicted RBP18.25■□□□□ 0.51
ATF3-202ENST00000341491 APAF1O14727 1248 aa18.23■□□□□ 0.51
ATF3-202ENST00000341491 U2SURPO15042 1029 aaKnown RBP18.23■□□□□ 0.51
ATF3-202ENST00000341491 COG3Q96JB2 828 aa18.23■□□□□ 0.51
ATF3-202ENST00000341491 ORAI2Q96SN7 254 aa18.23■□□□□ 0.51
ATF3-202ENST00000341491 POLKQ9UBT6 870 aa18.23■□□□□ 0.51
ATF3-202ENST00000341491 RRP7AQ9Y3A4 280 aaKnown RBP18.23■□□□□ 0.51
ATF3-202ENST00000341491 XIRP1Q702N8 1843 aaKnown RBP18.23■□□□□ 0.51
ATF3-202ENST00000341491 ESCO1Q5FWF5 840 aa18.23■□□□□ 0.51
ATF3-202ENST00000341491 ZNF692Q9BU19 519 aaPredicted RBP18.22■□□□□ 0.51
ATF3-202ENST00000341491 MARF1Q9Y4F3 1742 aaKnown RBP18.22■□□□□ 0.51
ATF3-202ENST00000341491 ANKARQ7Z5J8 1434 aa18.22■□□□□ 0.51
ATF3-202ENST00000341491 TMEM94Q12767 1356 aa18.22■□□□□ 0.51
ATF3-202ENST00000341491 PAK3O75914 559 aaPredicted RBP18.22■□□□□ 0.51
ATF3-202ENST00000341491 NEUROD2Q15784 382 aa18.22■□□□□ 0.51
ATF3-202ENST00000341491 CFAP53Q96M91 514 aa18.22■□□□□ 0.51
ATF3-202ENST00000341491 SSH2Q76I76 1423 aa18.21■□□□□ 0.51
ATF3-202ENST00000341491 U2AF1L5P0DN76 240 aaPredicted RBP18.21■□□□□ 0.51
ATF3-202ENST00000341491 U2AF1Q01081 240 aaKnown RBP eCLIP18.21■□□□□ 0.51
ATF3-202ENST00000341491 FKBP8Q14318 412 aa18.21■□□□□ 0.51
ATF3-202ENST00000341491 PHF8Q9UPP1 1060 aa18.2■□□□□ 0.5
ATF3-202ENST00000341491 OVOS2A0A0J9YW53 1432 aa18.2■□□□□ 0.5
ATF3-202ENST00000341491 OVOS2Q6IE36 1432 aa18.2■□□□□ 0.5
ATF3-202ENST00000341491 PEAK1Q9H792 1746 aa18.2■□□□□ 0.5
ATF3-202ENST00000341491 ZNF335Q9H4Z2 1342 aaPredicted RBP18.2■□□□□ 0.5
ATF3-202ENST00000341491 DDX17Q92841 729 aaKnown RBP18.19■□□□□ 0.5
ATF3-202ENST00000341491 DMRT2Q9Y5R5 561 aa18.18■□□□□ 0.5
ATF3-202ENST00000341491 NUDCQ9Y266 331 aa18.18■□□□□ 0.5
ATF3-202ENST00000341491 SMG6Q86US8 1419 aaKnown RBP18.17■□□□□ 0.5
ATF3-202ENST00000341491 FOXO3O43524 673 aa18.16■□□□□ 0.5
ATF3-202ENST00000341491 HMOX1P09601 288 aa18.15■□□□□ 0.5
ATF3-202ENST00000341491 SPINK5Q9NQ38 1064 aaPredicted RBP18.15■□□□□ 0.5
ATF3-202ENST00000341491 IQSEC2Q5JU85 1478 aa18.15■□□□□ 0.5
ATF3-202ENST00000341491 DIAPH1O60610 1272 aaKnown RBP18.14■□□□□ 0.49
ATF3-202ENST00000341491 LRRC7Q96NW7 1537 aa18.13■□□□□ 0.49
ATF3-202ENST00000341491 INSRP06213 1382 aa18.13■□□□□ 0.49
ATF3-202ENST00000341491 NLRP6P59044 892 aa18.13■□□□□ 0.49
ATF3-202ENST00000341491 C1orf167Q5SNV9 1468 aa18.13■□□□□ 0.49
ATF3-202ENST00000341491 ABTB2Q8N961 1025 aa18.13■□□□□ 0.49
ATF3-202ENST00000341491 PNPLA6Q8IY17 1366 aa18.12■□□□□ 0.49
ATF3-202ENST00000341491 TCP11L2Q8N4U5 519 aa18.12■□□□□ 0.49
ATF3-202ENST00000341491 CDK12Q9NYV4 1490 aaPredicted RBP18.11■□□□□ 0.49
ATF3-202ENST00000341491 TTC21AQ8NDW8 1320 aa18.11■□□□□ 0.49
ATF3-202ENST00000341491 PSME1Q06323 249 aa18.11■□□□□ 0.49
ATF3-202ENST00000341491 LMOD2Q6P5Q4 547 aa18.11■□□□□ 0.49
ATF3-202ENST00000341491 C19orf44Q9H6X5 657 aa18.11■□□□□ 0.49
ATF3-202ENST00000341491 MST1RQ04912 1400 aa18.11■□□□□ 0.49
ATF3-202ENST00000341491 ZNF521Q96K83 1311 aa18.1■□□□□ 0.49
ATF3-202ENST00000341491 HSP90AB2PQ58FF8 381 aa18.1■□□□□ 0.49
ATF3-202ENST00000341491 RUNDC1Q96C34 613 aa18.1■□□□□ 0.49
ATF3-202ENST00000341491 AATKQ6ZMQ8 1374 aa18.1■□□□□ 0.49
ATF3-202ENST00000341491 MAP3K19Q56UN5 1328 aa18.1■□□□□ 0.49
ATF3-202ENST00000341491 ZBTB7CA1YPR0 619 aa18.1■□□□□ 0.49
ATF3-202ENST00000341491 LTN1O94822 1766 aa18.1■□□□□ 0.49
ATF3-202ENST00000341491 ATF3P18847 181 aa18.09■□□□□ 0.49
ATF3-202ENST00000341491 USP31Q70CQ4 1352 aa18.08■□□□□ 0.49
ATF3-202ENST00000341491 TRPM3Q9HCF6 1732 aaPredicted RBP18.08■□□□□ 0.48
ATF3-202ENST00000341491 NEFLP07196 543 aa18.08■□□□□ 0.48
ATF3-202ENST00000341491 IL13P35225 146 aa18.08■□□□□ 0.48
ATF3-202ENST00000341491 PLEKHF1Q96S99 279 aa18.08■□□□□ 0.48
ATF3-202ENST00000341491 PRKAR2BP31323 418 aa18.06■□□□□ 0.48
ATF3-202ENST00000341491 EIF4A2Q14240 407 aaKnown RBP18.06■□□□□ 0.48
ATF3-202ENST00000341491 AEBP1Q8IUX7 1158 aa18.06■□□□□ 0.48
ATF3-202ENST00000341491 WWC1Q8IX03 1113 aa18.05■□□□□ 0.48
ATF3-202ENST00000341491 PHACTR3Q96KR7 559 aa18.05■□□□□ 0.48
ATF3-202ENST00000341491 RSPH6AQ9H0K4 717 aa18.05■□□□□ 0.48
ATF3-202ENST00000341491 DLG5Q8TDM6 1919 aa18.04■□□□□ 0.48
ATF3-202ENST00000341491 KIF1AQ12756 1690 aa18.04■□□□□ 0.48
ATF3-202ENST00000341491 MSH6P52701 1360 aa18.04■□□□□ 0.48
ATF3-202ENST00000341491 USP54Q70EL1 1684 aa18.04■□□□□ 0.48
ATF3-202ENST00000341491 GOLGA2Q08379 1002 aa18.04■□□□□ 0.48
ATF3-202ENST00000341491 DUSP27Q5VZP5 1158 aa18.04■□□□□ 0.48
ATF3-202ENST00000341491 KRT28Q7Z3Y7 464 aa18.03■□□□□ 0.48
ATF3-202ENST00000341491 LTV1Q96GA3 475 aaPredicted RBP18.03■□□□□ 0.48
ATF3-202ENST00000341491 MAPK8IP3Q9UPT6 1336 aa18.02■□□□□ 0.48
ATF3-202ENST00000341491 AMPHP49418 695 aa18.02■□□□□ 0.48
ATF3-202ENST00000341491 PDE3BQ13370 1112 aa18.02■□□□□ 0.48
ATF3-202ENST00000341491 RGPD2P0DJD1 1756 aa18.02■□□□□ 0.48
ATF3-202ENST00000341491 NFAT5O94916 1531 aa18.01■□□□□ 0.47
ATF3-202ENST00000341491 PLIN1O60240 522 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms