RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 FRAT1Q92837 279 aaPredicted RBP26.02■■□□□ 1.76
SPG7-202ENST00000341316 FBLN1P23142 703 aa26.01■■□□□ 1.75
SPG7-202ENST00000341316 COG6Q9Y2V7 657 aa26.01■■□□□ 1.75
SPG7-202ENST00000341316 CANXP27824 592 aaKnown RBP26■■□□□ 1.75
SPG7-202ENST00000341316 KIF20BQ96Q89 1820 aa26■■□□□ 1.75
SPG7-202ENST00000341316 PNPLA6Q8IY17 1366 aa26■■□□□ 1.75
SPG7-202ENST00000341316 TMPOP42166 694 aaKnown RBP25.99■■□□□ 1.75
SPG7-202ENST00000341316 TXNDC2Q86VQ3 553 aa25.99■■□□□ 1.75
SPG7-202ENST00000341316 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.99■■□□□ 1.75
SPG7-202ENST00000341316 BCL2L13Q9BXK5 485 aa25.99■■□□□ 1.75
SPG7-202ENST00000341316 TNNQ9UQP3 1299 aa25.99■■□□□ 1.75
SPG7-202ENST00000341316 ATP7BP35670 1465 aa25.99■■□□□ 1.75
SPG7-202ENST00000341316 IGHDP01880 384 aa25.98■■□□□ 1.75
SPG7-202ENST00000341316 TRIM35Q9UPQ4 493 aa25.98■■□□□ 1.75
SPG7-202ENST00000341316 MYH16Q9H6N6 1097 aa25.98■■□□□ 1.75
SPG7-202ENST00000341316 WASLO00401 505 aaPredicted RBP25.97■■□□□ 1.75
SPG7-202ENST00000341316 DIAPH1O60610 1272 aaKnown RBP25.97■■□□□ 1.75
SPG7-202ENST00000341316 TNRQ92752 1358 aa25.96■■□□□ 1.75
SPG7-202ENST00000341316 RLBP1P12271 317 aa25.95■■□□□ 1.75
SPG7-202ENST00000341316 TSR2Q969E8 191 aaKnown RBP25.95■■□□□ 1.75
SPG7-202ENST00000341316 CLUAP1Q96AJ1 413 aa25.94■■□□□ 1.74
SPG7-202ENST00000341316 POLKQ9UBT6 870 aa25.94■■□□□ 1.74
SPG7-202ENST00000341316 CPSF1Q10570 1443 aaKnown RBP25.93■■□□□ 1.74
SPG7-202ENST00000341316 NCKAP5LQ9HCH0 1330 aa25.93■■□□□ 1.74
SPG7-202ENST00000341316 PPIP5K1Q6PFW1 1433 aa25.93■■□□□ 1.74
SPG7-202ENST00000341316 MAPK8IP3Q9UPT6 1336 aa25.93■■□□□ 1.74
SPG7-202ENST00000341316 PPM1GO15355 546 aaPredicted RBP25.91■■□□□ 1.74
SPG7-202ENST00000341316 RGS3P49796 1198 aa25.91■■□□□ 1.74
SPG7-202ENST00000341316 ZRANB1Q9UGI0 708 aa25.9■■□□□ 1.74
SPG7-202ENST00000341316 LAS1LQ9Y4W2 734 aaKnown RBP25.9■■□□□ 1.74
SPG7-202ENST00000341316 TMEM2Q9UHN6 1383 aa25.9■■□□□ 1.74
SPG7-202ENST00000341316 TECPR2O15040 1411 aa25.89■■□□□ 1.74
SPG7-202ENST00000341316 NME9Q86XW9 330 aa25.89■■□□□ 1.74
SPG7-202ENST00000341316 NUDT16Q96DE0 195 aaKnown RBP25.89■■□□□ 1.74
SPG7-202ENST00000341316 RIPK4P57078 832 aa25.89■■□□□ 1.73
SPG7-202ENST00000341316 FAM135BQ49AJ0 1406 aa25.88■■□□□ 1.73
SPG7-202ENST00000341316 C8orf34Q49A92 452 aa25.88■■□□□ 1.73
SPG7-202ENST00000341316 EDC4Q6P2E9 1401 aaKnown RBP25.88■■□□□ 1.73
SPG7-202ENST00000341316 EXOSC9Q06265 439 aaKnown RBP25.88■■□□□ 1.73
SPG7-202ENST00000341316 UBR1Q8IWV7 1749 aa25.87■■□□□ 1.73
SPG7-202ENST00000341316 HDGFP51858 240 aaKnown RBP25.87■■□□□ 1.73
SPG7-202ENST00000341316 CDC42BPGQ6DT37 1551 aa25.87■■□□□ 1.73
SPG7-202ENST00000341316 KNDC1Q76NI1 1749 aa25.87■■□□□ 1.73
SPG7-202ENST00000341316 SIRT1Q96EB6 747 aa25.86■■□□□ 1.73
SPG7-202ENST00000341316 LRRC7Q96NW7 1537 aa25.86■■□□□ 1.73
SPG7-202ENST00000341316 EMILIN1Q9Y6C2 1016 aa25.86■■□□□ 1.73
SPG7-202ENST00000341316 RSPH6AQ9H0K4 717 aa25.85■■□□□ 1.73
SPG7-202ENST00000341316 CPS1P31327 1500 aa25.85■■□□□ 1.73
SPG7-202ENST00000341316 FAM161AQ3B820 660 aa25.85■■□□□ 1.73
SPG7-202ENST00000341316 FCHSD2O94868 740 aa25.84■■□□□ 1.73
SPG7-202ENST00000341316 PCDHB15Q9Y5E8 787 aa25.84■■□□□ 1.73
SPG7-202ENST00000341316 ROBO2Q9HCK4 1378 aa25.84■■□□□ 1.73
SPG7-202ENST00000341316 CCDC61Q9Y6R9 512 aa25.84■■□□□ 1.73
SPG7-202ENST00000341316 ADAMTS13Q76LX8 1427 aa25.83■■□□□ 1.73
SPG7-202ENST00000341316 PRR36Q9H6K5 1346 aa25.83■■□□□ 1.73
SPG7-202ENST00000341316 PRKAR2BP31323 418 aa25.83■■□□□ 1.73
SPG7-202ENST00000341316 CEBPAP49715 358 aaPredicted RBP25.83■■□□□ 1.73
SPG7-202ENST00000341316 IL16Q14005 1332 aa25.83■■□□□ 1.72
SPG7-202ENST00000341316 CT47B1P0C2W7 299 aaPredicted RBP25.82■■□□□ 1.72
SPG7-202ENST00000341316 MAP2P11137 1827 aaKnown RBP25.81■■□□□ 1.72
SPG7-202ENST00000341316 LTKP29376 864 aa25.81■■□□□ 1.72
SPG7-202ENST00000341316 PNNQ9H307 717 aaKnown RBP25.81■■□□□ 1.72
SPG7-202ENST00000341316 NEFMP07197 916 aa25.8■■□□□ 1.72
SPG7-202ENST00000341316 HMOX1P09601 288 aa25.8■■□□□ 1.72
SPG7-202ENST00000341316 SSH1Q8WYL5 1049 aa25.8■■□□□ 1.72
SPG7-202ENST00000341316 PHACTR3Q96KR7 559 aa25.8■■□□□ 1.72
SPG7-202ENST00000341316 ZKSCAN2Q63HK3 967 aa25.79■■□□□ 1.72
SPG7-202ENST00000341316 DDRGK1Q96HY6 314 aa25.79■■□□□ 1.72
SPG7-202ENST00000341316 SMC4Q9NTJ3 1288 aa25.79■■□□□ 1.72
SPG7-202ENST00000341316 IL13P35225 146 aa25.78■■□□□ 1.72
SPG7-202ENST00000341316 MON2Q7Z3U7 1717 aa25.78■■□□□ 1.72
SPG7-202ENST00000341316 AAMPQ13685 434 aa25.77■■□□□ 1.72
SPG7-202ENST00000341316 MVPQ14764 893 aaKnown RBP25.77■■□□□ 1.72
SPG7-202ENST00000341316 PLPPR3Q6T4P5 718 aa25.76■■□□□ 1.71
SPG7-202ENST00000341316 AATKQ6ZMQ8 1374 aa25.76■■□□□ 1.71
SPG7-202ENST00000341316 RRS1Q15050 365 aaKnown RBP25.76■■□□□ 1.71
SPG7-202ENST00000341316 DZIP1LQ8IYY4 767 aaKnown RBP25.76■■□□□ 1.71
SPG7-202ENST00000341316 USP35Q9P2H5 1018 aa25.75■■□□□ 1.71
SPG7-202ENST00000341316 CDK12Q9NYV4 1490 aaPredicted RBP25.75■■□□□ 1.71
SPG7-202ENST00000341316 TRIM27P14373 513 aa25.75■■□□□ 1.71
SPG7-202ENST00000341316 COG3Q96JB2 828 aa25.75■■□□□ 1.71
SPG7-202ENST00000341316 PMFBP1Q8TBY8 1022 aa25.74■■□□□ 1.71
SPG7-202ENST00000341316 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.74■■□□□ 1.71
SPG7-202ENST00000341316 PLEKHG1Q9ULL1 1385 aa25.74■■□□□ 1.71
SPG7-202ENST00000341316 AKAP12Q02952 1782 aa25.74■■□□□ 1.71
SPG7-202ENST00000341316 C3P01024 1663 aa25.73■■□□□ 1.71
SPG7-202ENST00000341316 FTSJ3Q8IY81 847 aaKnown RBP25.73■■□□□ 1.71
SPG7-202ENST00000341316 NFE2L2Q16236 605 aa25.72■■□□□ 1.71
SPG7-202ENST00000341316 SLC26A8Q96RN1 970 aa25.72■■□□□ 1.71
SPG7-202ENST00000341316 THUMPD2Q9BTF0 503 aaKnown RBP25.72■■□□□ 1.71
SPG7-202ENST00000341316 NOB1Q9ULX3 412 aaKnown RBP25.71■■□□□ 1.71
SPG7-202ENST00000341316 NUTM2FA1L443 756 aa25.71■■□□□ 1.71
SPG7-202ENST00000341316 PTPRUQ92729 1446 aa25.7■■□□□ 1.71
SPG7-202ENST00000341316 ZNF692Q9BU19 519 aaPredicted RBP25.7■■□□□ 1.7
SPG7-202ENST00000341316 ITSN1Q15811 1721 aa25.7■■□□□ 1.7
SPG7-202ENST00000341316 ATF7IPQ6VMQ6 1270 aa25.69■■□□□ 1.7
SPG7-202ENST00000341316 ACEP12821 1306 aa25.66■■□□□ 1.7
SPG7-202ENST00000341316 PDZRN3Q9UPQ7 1066 aa25.66■■□□□ 1.7
SPG7-202ENST00000341316 RWDD1Q9H446 243 aaPredicted RBP25.66■■□□□ 1.7
SPG7-202ENST00000341316 TTC21BQ7Z4L5 1316 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms