RNA–Protein interactions for RNA: ENST00000340898.6

RNFT1P3-201, Transcript of ring finger protein, transmembrane 1 pseudogene 3, humanhuman

BASIC

Gene RNFT1P3, Length 1,052 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1P3-201ENST00000340898 SIGLEC1Q9BZZ2 1709 aa9.66□□□□□ -0.86
RNFT1P3-201ENST00000340898 SMAPO00193 183 aa9.66□□□□□ -0.86
RNFT1P3-201ENST00000340898 RAD21O60216 631 aa9.66□□□□□ -0.86
RNFT1P3-201ENST00000340898 SLC4A3P48751 1232 aa9.66□□□□□ -0.86
RNFT1P3-201ENST00000340898 DMRTA1Q5VZB9 504 aa9.66□□□□□ -0.86
RNFT1P3-201ENST00000340898 POTEEQ6S8J3 1075 aa9.66□□□□□ -0.86
RNFT1P3-201ENST00000340898 C1orf115Q9H7X2 142 aa9.66□□□□□ -0.86
RNFT1P3-201ENST00000340898 CFAP74Q9C0B2 1584 aa9.66□□□□□ -0.86
RNFT1P3-201ENST00000340898 ARHGEF12Q9NZN5 1544 aa9.66□□□□□ -0.86
RNFT1P3-201ENST00000340898 CDC42BPAQ5VT25 1732 aa9.65□□□□□ -0.86
RNFT1P3-201ENST00000340898 NBPF3Q9H094 633 aa9.65□□□□□ -0.86
RNFT1P3-201ENST00000340898 VPS9D1Q9Y2B5 631 aa9.65□□□□□ -0.86
RNFT1P3-201ENST00000340898 ARHGAP5Q13017 1502 aa9.65□□□□□ -0.86
RNFT1P3-201ENST00000340898 GPATCH8Q9UKJ3 1502 aaKnown RBP9.65□□□□□ -0.86
RNFT1P3-201ENST00000340898 SPDYE5A6NIY4 337 aa9.64□□□□□ -0.87
RNFT1P3-201ENST00000340898 TK2O00142 265 aa9.64□□□□□ -0.87
RNFT1P3-201ENST00000340898 CD46P15529 392 aa9.64□□□□□ -0.87
RNFT1P3-201ENST00000340898 RIC3Q7Z5B4 369 aa9.64□□□□□ -0.87
RNFT1P3-201ENST00000340898 NUTM1Q86Y26 1132 aa9.64□□□□□ -0.87
RNFT1P3-201ENST00000340898 BANK1Q8NDB2 785 aa9.64□□□□□ -0.87
RNFT1P3-201ENST00000340898 SPIRE2Q8WWL2 714 aa9.64□□□□□ -0.87
RNFT1P3-201ENST00000340898 TMEM134Q9H6X4 195 aa9.64□□□□□ -0.87
RNFT1P3-201ENST00000340898 POGZQ7Z3K3 1410 aa9.64□□□□□ -0.87
RNFT1P3-201ENST00000340898 TRAPPC8Q9Y2L5 1435 aa9.64□□□□□ -0.87
RNFT1P3-201ENST00000340898 PREX2Q70Z35 1606 aa9.64□□□□□ -0.87
RNFT1P3-201ENST00000340898 C3orf80F5H4A9 247 aa9.63□□□□□ -0.87
RNFT1P3-201ENST00000340898 TMEM259Q4ZIN3 620 aa9.63□□□□□ -0.87
RNFT1P3-201ENST00000340898 CDAN1Q8IWY9 1227 aa9.63□□□□□ -0.87
RNFT1P3-201ENST00000340898 STAC3Q96MF2 364 aa9.63□□□□□ -0.87
RNFT1P3-201ENST00000340898 ZNF777Q9ULD5 760 aaPredicted RBP9.63□□□□□ -0.87
RNFT1P3-201ENST00000340898 MTUS2Q5JR59 1369 aa9.63□□□□□ -0.87
RNFT1P3-201ENST00000340898 ZMYM4Q5VZL5 1548 aa9.62□□□□□ -0.87
RNFT1P3-201ENST00000340898 ARID4BQ4LE39 1312 aaPredicted RBP9.62□□□□□ -0.87
RNFT1P3-201ENST00000340898 ZNF644Q9H582 1327 aaPredicted RBP9.62□□□□□ -0.87
RNFT1P3-201ENST00000340898 DDX11L8A8MPP1 907 aa9.62□□□□□ -0.87
RNFT1P3-201ENST00000340898 RFC5P40937 340 aa9.62□□□□□ -0.87
RNFT1P3-201ENST00000340898 HNRNPMP52272 730 aaKnown RBP eCLIP9.62□□□□□ -0.87
RNFT1P3-201ENST00000340898 FAM98CQ17RN3 349 aaKnown RBP9.62□□□□□ -0.87
RNFT1P3-201ENST00000340898 KANK4Q5T7N3 995 aaPredicted RBP9.62□□□□□ -0.87
RNFT1P3-201ENST00000340898 LAPTM4BQ86VI4 370 aa9.62□□□□□ -0.87
RNFT1P3-201ENST00000340898 ADAMTSL3P82987 1691 aa9.61□□□□□ -0.87
RNFT1P3-201ENST00000340898 TUSC1Q2TAM9 212 aa9.61□□□□□ -0.87
RNFT1P3-201ENST00000340898 PROSER2Q86WR7 435 aaPredicted RBP9.61□□□□□ -0.87
RNFT1P3-201ENST00000340898 LIMD1Q9UGP4 676 aa9.61□□□□□ -0.87
RNFT1P3-201ENST00000340898 SEPT9Q9UHD8 586 aaPredicted RBP9.61□□□□□ -0.87
RNFT1P3-201ENST00000340898 VPS8Q8N3P4 1428 aa9.61□□□□□ -0.87
RNFT1P3-201ENST00000340898 ZFYVE16Q7Z3T8 1539 aa9.61□□□□□ -0.87
RNFT1P3-201ENST00000340898 ARHGEF40Q8TER5 1519 aa9.61□□□□□ -0.87
RNFT1P3-201ENST00000340898 BCORL1Q5H9F3 1711 aa9.6□□□□□ -0.87
RNFT1P3-201ENST00000340898 SAMD9LQ8IVG5 1584 aa9.6□□□□□ -0.87
RNFT1P3-201ENST00000340898 POTEB3A0JP26 581 aa9.6□□□□□ -0.87
RNFT1P3-201ENST00000340898 SPTLC1O15269 473 aa9.6□□□□□ -0.87
RNFT1P3-201ENST00000340898 MLECQ14165 292 aa9.6□□□□□ -0.87
RNFT1P3-201ENST00000340898 PPP2R2DQ66LE6 453 aa9.6□□□□□ -0.87
RNFT1P3-201ENST00000340898 POTEBQ6S5H4 581 aa9.6□□□□□ -0.87
RNFT1P3-201ENST00000340898 CFDP1Q9UEE9 299 aaPredicted RBP9.6□□□□□ -0.87
RNFT1P3-201ENST00000340898 ABCC1P33527 1531 aa9.6□□□□□ -0.87
RNFT1P3-201ENST00000340898 MAGI2Q86UL8 1455 aa9.59□□□□□ -0.87
RNFT1P3-201ENST00000340898 LSM11P83369 360 aaKnown RBP eCLIP9.59□□□□□ -0.87
RNFT1P3-201ENST00000340898 MRPL50Q8N5N7 158 aaKnown RBP9.59□□□□□ -0.87
RNFT1P3-201ENST00000340898 RDH13Q8NBN7 331 aa9.59□□□□□ -0.87
RNFT1P3-201ENST00000340898 CCNB3Q8WWL7 1395 aa9.59□□□□□ -0.87
RNFT1P3-201ENST00000340898 ATP10AO60312 1499 aa9.59□□□□□ -0.87
RNFT1P3-201ENST00000340898 ZNF518AQ6AHZ1 1483 aa9.59□□□□□ -0.87
RNFT1P3-201ENST00000340898 KDM5CP41229 1560 aa9.58□□□□□ -0.88
RNFT1P3-201ENST00000340898 TIAM1Q13009 1591 aa9.58□□□□□ -0.88
RNFT1P3-201ENST00000340898 ITSN2Q9NZM3 1697 aa9.58□□□□□ -0.88
RNFT1P3-201ENST00000340898 GJA5P36382 358 aa9.58□□□□□ -0.88
RNFT1P3-201ENST00000340898 RSBN1LQ6PCB5 846 aaPredicted RBP9.58□□□□□ -0.88
RNFT1P3-201ENST00000340898 EHBP1L1Q8N3D4 1523 aa9.57□□□□□ -0.88
RNFT1P3-201ENST00000340898 MADDQ8WXG6 1647 aa9.57□□□□□ -0.88
RNFT1P3-201ENST00000340898 SWT1Q5T5J6 900 aaKnown RBP9.57□□□□□ -0.88
RNFT1P3-201ENST00000340898 ADGRD1Q6QNK2 874 aa9.57□□□□□ -0.88
RNFT1P3-201ENST00000340898 SLF2Q8IX21 1173 aa9.57□□□□□ -0.88
RNFT1P3-201ENST00000340898 MYT1LQ9UL68 1186 aa9.57□□□□□ -0.88
RNFT1P3-201ENST00000340898 PTPRMP28827 1452 aa9.57□□□□□ -0.88
RNFT1P3-201ENST00000340898 SYCP2Q9BX26 1530 aa9.56□□□□□ -0.88
RNFT1P3-201ENST00000340898 KIDINS220Q9ULH0 1771 aa9.56□□□□□ -0.88
RNFT1P3-201ENST00000340898 DIP2CQ9Y2E4 1556 aa9.56□□□□□ -0.88
RNFT1P3-201ENST00000340898 NCOA2Q15596 1464 aa9.56□□□□□ -0.88
RNFT1P3-201ENST00000340898 LRRC9Q6ZRR7 1453 aa9.56□□□□□ -0.88
RNFT1P3-201ENST00000340898 MLH3Q9UHC1 1453 aa9.56□□□□□ -0.88
RNFT1P3-201ENST00000340898 GOLGA8CPA6NN73 597 aa9.56□□□□□ -0.88
RNFT1P3-201ENST00000340898 BHMG1C9JSJ3 638 aaPredicted RBP9.56□□□□□ -0.88
RNFT1P3-201ENST00000340898 ANKRD13DQ6ZTN6 518 aa9.56□□□□□ -0.88
RNFT1P3-201ENST00000340898 POM121Q96HA1 1249 aa9.56□□□□□ -0.88
RNFT1P3-201ENST00000340898 SNRKQ9NRH2 765 aa9.56□□□□□ -0.88
RNFT1P3-201ENST00000340898 ABCA6Q8N139 1617 aa9.56□□□□□ -0.88
RNFT1P3-201ENST00000340898 MOXD2PA6NHM9 499 aa9.55□□□□□ -0.88
RNFT1P3-201ENST00000340898 FNBP4Q8N3X1 1017 aaPredicted RBP9.55□□□□□ -0.88
RNFT1P3-201ENST00000340898 CCDC82Q8N4S0 544 aa9.55□□□□□ -0.88
RNFT1P3-201ENST00000340898 COG6Q9Y2V7 657 aa9.55□□□□□ -0.88
RNFT1P3-201ENST00000340898 C9orf84Q5VXU9 1444 aa9.55□□□□□ -0.88
RNFT1P3-201ENST00000340898 HECW2Q9P2P5 1572 aa9.54□□□□□ -0.88
RNFT1P3-201ENST00000340898 MBD5Q9P267 1494 aa9.54□□□□□ -0.88
RNFT1P3-201ENST00000340898 KDM4AO75164 1064 aa9.54□□□□□ -0.88
RNFT1P3-201ENST00000340898 CSPP1Q1MSJ5 1256 aa9.54□□□□□ -0.88
RNFT1P3-201ENST00000340898 NECTIN2Q92692 538 aa9.54□□□□□ -0.88
RNFT1P3-201ENST00000340898 KIAA1107Q9UPP5 1409 aa9.54□□□□□ -0.88
RNFT1P3-201ENST00000340898 RIMS1Q86UR5 1692 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms